prot_E-siliculosus-1a_F_contig1450.2625.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1450.2625.1
Unique Nameprot_E-siliculosus-1a_F_contig1450.2625.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length161
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1450.2625.1 vs. uniprot
Match: A0A6H5L2C4_9PHAE (Cystatin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C4_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 2.390e-96
Identity = 146/160 (91.25%), Postives = 153/160 (95.62%), Query Frame = 0 
Query:    1 MRVGPLLALLLSGLGSSVSARETTKTTVSDKEAAAAEKRGDRPDKATRPTYLHPRDKMNGRGPVASAPLAGAKQDVTGSNDQHLSEVTEFAAEYLTEQNSELTYIQIKAEVQVVAGMMYTLHYRGNDAAGECLEERTLVVYDKPWLDERTLKSDTVTECT 160
            MR GPLLALLLSGLGSSV A ETT TTVSDKEAAAAEKRGDRP++ TRPTYL PRD+M+GRGPVASAPL GAKQDVTGSND+HLSEVTEFAA+YLTEQNSELTYIQ+KAEVQVVAGMMYTLHYRGNDAAGECLEERTLVVYDKPWLDERTLKSDTVTECT
Sbjct:    1 MRFGPLLALLLSGLGSSVFAGETTTTTVSDKEAAAAEKRGDRPERPTRPTYLRPRDQMDGRGPVASAPLVGAKQDVTGSNDKHLSEVTEFAAKYLTEQNSELTYIQVKAEVQVVAGMMYTLHYRGNDAAGECLEERTLVVYDKPWLDERTLKSDTVTECT 160
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1450.2625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2C4_9PHAE2.390e-9691.25Cystatin domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 65..158
e-value: 3.3E-12
score: 48.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..160
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePRODOMPD001231coord: 83..153
e-value: 0.003
score: 93.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.793
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 66..154
IPR000010Cystatin domainPFAMPF16845SQAPIcoord: 80..153
e-value: 3.5E-8
score: 33.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1450contigE-siliculosus-1a_F_contig1450:3161..4841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1450.2625.1mRNA_E-siliculosus-1a_F_contig1450.2625.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1450 1766..4841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1450.2625.1 ID=prot_E-siliculosus-1a_F_contig1450.2625.1|Name=mRNA_E-siliculosus-1a_F_contig1450.2625.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=161bp
MRVGPLLALLLSGLGSSVSARETTKTTVSDKEAAAAEKRGDRPDKATRPT
YLHPRDKMNGRGPVASAPLAGAKQDVTGSNDQHLSEVTEFAAEYLTEQNS
ELTYIQIKAEVQVVAGMMYTLHYRGNDAAGECLEERTLVVYDKPWLDERT
LKSDTVTECT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000010Cystatin_dom