prot_E-siliculosus-1a_F_contig1447.2612.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1447.2612.1
Unique Nameprot_E-siliculosus-1a_F_contig1447.2612.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length373
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1447.2612.1 vs. uniprot
Match: D8LCB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB1_ECTSI)

HSP 1 Score: 627 bits (1617), Expect = 4.840e-225
Identity = 329/372 (88.44%), Postives = 340/372 (91.40%), Query Frame = 0
Query:    1 CQTFLWGGTGISTVGADGACRCACGDETWSEYSILGLPSCVPSKAHVVFGAVGVLMTMTSLVHAAYQLYRQVKYHRQVIAASTSSVEKCRRWLHIAVIVHAVIGLCYFGMVLLLDSERLWVSTIFMFGIGQTMMTISGILTVHMWIYCNDPRLIRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAAAKSLQAVCMVSAVAFLGLIVFCDFIILKSATALLRTVNKYLRNTVGRSERSNSIVAGTVGSLQLLKAARKNIKFALYFCVVVSLLTALFLMIGLFTTYGVTAPLIFFGIPYGFSPPAWFVFNVQLHAGRSRSRTGTDVVSGASSVIRKVSSVATRIVSRFKGAVFGSERSVVPAVAPSSP 372
            CQT LWGGTGISTVGADGACRCACG+ETWSEY+I+GLPSCVPSKAHVVFG VGVLM  TSL H+AYQLYRQVK+HRQVI AS SSVEKCRRWLHI VI+HAVIGLCYFGMVLLLDSERLW+STIFM   GQTMMTI GILTV MWIYCNDPRL RETPEILAISEALERPTGCFVSNTVMCVGPAIATVLA AKSLQA   VSAVAFLGLIVFCDFIILKS TALLRTVNKYLRNTV RSERSNSIVAGTVGSL LLKAARKNIKFALYFC+VVSLLTA FLMI LFTTYG TAPLIFFGIPYGFSPP WFVFNVQLHAGRSRSRT TDVVSGASSVI KVSSVAT IVSR KGAV GS+R VVPA+ P+SP
Sbjct:    6 CQTILWGGTGISTVGADGACRCACGNETWSEYNIVGLPSCVPSKAHVVFGTVGVLMATTSLCHSAYQLYRQVKHHRQVITASISSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMSTIFMLSAGQTMMTIGGILTVRMWIYCNDPRLTRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAVAKSLQAAGKVSAVAFLGLIVFCDFIILKSGTALLRTVNKYLRNTVERSERSNSIVAGTVGSLPLLKAARKNIKFALYFCLVVSLLTA-FLMICLFTTYGATAPLIFFGIPYGFSPPVWFVFNVQLHAGRSRSRTSTDVVSGASSVIWKVSSVATTIVSRVKGAVLGSKRFVVPALTPASP 376          
BLAST of mRNA_E-siliculosus-1a_F_contig1447.2612.1 vs. uniprot
Match: A0A6H5KM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM92_9PHAE)

HSP 1 Score: 608 bits (1568), Expect = 4.220e-217
Identity = 321/400 (80.25%), Postives = 341/400 (85.25%), Query Frame = 0
Query:    1 CQTFLWGGTGISTVGADGACRCACGDETWSEYSILGLPSCVPSKAHVVFGAVGVLMTMTSLVHAAYQLYRQVKYHRQVIAASTSSVEKCRRWLHIAVIVHAVIGLCYFGMVLLLDSERLWVSTIFMFGIGQTMMTISGILTVHMWIYC------------------------------NDPRLIRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAAAKSLQAVCMVSAVAFLGLIVFCDFIILKSATALLRTVNKYLRNTVGRSERSNSIVAGTVGSLQLLKAARKNIKFALYFCVVVSLLTALFLMIGLFTTYGVTAPLIFFGIPYGFSPPAWFVFNVQLHAGRSRSRTGTDVVSGASSVIRKVSSVATRIVSRFKGAVFGSERSVVPAVAPS 370
            CQT LWGGTGISTVGADG CRCACGDETWSEY+ILGLPSCVPSKAH VFGAVGV +TMTSL HAAYQLYRQVKYHRQ +AASTSSVEKCRRWLHI VI+HAVIGLCYFGMVLLLDSERLW+STIFMFGIGQ MMTI GILTV MW+YC                              NDPRLIRETPE+L ISEALERPTG FVSNTVMCVGPA+ATVLAAAKSLQA CMVSAVAFLGLIVFCDFIILK+ATALL+TVNKYLRN+V RSE+SNSI+AGTVGSLQLLKAARKNIKFALYFCVVVSLLT   +MIGLFTTYG TAPLIF GIPYG SPP WFVFN+QLHAGRSR+RT  DVVS ASSVIR+V SVATRIVSR KG VFG+ERSVVP + P+
Sbjct:    6 CQTSLWGGTGISTVGADGGCRCACGDETWSEYNILGLPSCVPSKAHAVFGAVGVFVTMTSLGHAAYQLYRQVKYHRQFMAASTSSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMSTIFMFGIGQIMMTIGGILTVRMWLYCLTSDEQRSPLQLNRFPYVSPLRNHILFLASNDPRLIRETPELLMISEALERPTGLFVSNTVMCVGPAVATVLAAAKSLQAACMVSAVAFLGLIVFCDFIILKTATALLQTVNKYLRNSVVRSEKSNSIMAGTVGSLQLLKAARKNIKFALYFCVVVSLLTFSIVMIGLFTTYGATAPLIFSGIPYGCSPPVWFVFNIQLHAGRSRNRTEPDVVSRASSVIRQVPSVATRIVSRAKGVVFGNERSVVPTLTPT 405          
BLAST of mRNA_E-siliculosus-1a_F_contig1447.2612.1 vs. uniprot
Match: D7G622_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G622_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 3.020e-25
Identity = 98/334 (29.34%), Postives = 147/334 (44.01%), Query Frame = 0
Query:   93 LHIAVIVHAVIGLCYFGMVLLLDSERLWVSTIFMFGIGQTMMTISGILTVHMWIYCNDPRLIRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAAAKSLQAVCMVSAVAFLGLIVFCDFIILKSATALLRTVNKYLRNT-------VGRSERSNSIVAGTVGSLQL----------------------------------------------------LKAARKNIKFALYFCVVVSLLTALFLMIGLFTTYGVTAPLIFFGIPYGFSPPAWFVFNVQLHAGRSRSRTGTDVVSGASSVIRKVSSVATRIVSRFKGAVFGSERSVVPAV 367
            +H+  + +AV+ L YF +VLL+ +    +S + +  + Q  +++ G LTV MWIY ND RL++ +  +L IS  LE   G  +S  V+  GP +ATVLA     +A   + AV F+ LIVF D        ALLR ++  L+N+       V   +R  S++A T+G  +                                                     L+AA++ +++A+ FC  +SL     L+  +F+ YG + PLI FG+     P  W  FN+QLHAGRSR                      + I  R  G   G  R VVPAV
Sbjct:    1 MHVTAVANAVVSLFYFLLVLLVKARWHEISVLVVI-LNQITVSVCGFLTVRMWIYTNDARLMQASSTMLRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFTDTTFWIFGRALLRAIDASLQNSRMRAMKSVFEEDRRESVLA-TLGGTEADEERGRRGSGXXXXXXXXXXSSSRTWSSVGPRRRGSWWGGEGRDESELGDGELQAAKRKVRWAMGFCAHMSLQGYAILLFSIFSKYGTSMPLILFGVQMTIVPLVWHAFNIQLHAGRSRG---------------------SAIGRRSSGVDRGGRRYVVPAV 311          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1447.2612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCB1_ECTSI4.840e-22588.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM92_9PHAE4.220e-21780.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G622_ECTSI3.020e-2529.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 291..295
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 316..372
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 266..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..315
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..190
NoneNo IPR availableTMHMMTMhelixcoord: 266..288
NoneNo IPR availableTMHMMTMhelixcoord: 197..219
NoneNo IPR availableTMHMMTMhelixcoord: 293..315
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 171..193
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1447contigE-siliculosus-1a_F_contig1447:17173..19626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1447.2612.1mRNA_E-siliculosus-1a_F_contig1447.2612.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1447 17173..19626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1447.2612.1 ID=prot_E-siliculosus-1a_F_contig1447.2612.1|Name=mRNA_E-siliculosus-1a_F_contig1447.2612.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=373bp
CQTFLWGGTGISTVGADGACRCACGDETWSEYSILGLPSCVPSKAHVVFG
AVGVLMTMTSLVHAAYQLYRQVKYHRQVIAASTSSVEKCRRWLHIAVIVH
AVIGLCYFGMVLLLDSERLWVSTIFMFGIGQTMMTISGILTVHMWIYCND
PRLIRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAAAKSLQAVC
MVSAVAFLGLIVFCDFIILKSATALLRTVNKYLRNTVGRSERSNSIVAGT
VGSLQLLKAARKNIKFALYFCVVVSLLTALFLMIGLFTTYGVTAPLIFFG
IPYGFSPPAWFVFNVQLHAGRSRSRTGTDVVSGASSVIRKVSSVATRIVS
RFKGAVFGSERSVVPAVAPSSP*
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