prot_E-siliculosus-1a_F_contig14468.2611.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14468.2611.1
Unique Nameprot_E-siliculosus-1a_F_contig14468.2611.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length162
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig14468.2611.1 vs. uniprot
Match: A0A6H5KL03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL03_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 8.960e-19
Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 0 
Query:    1 MHHERWLGFSANGKEVGTGDGFSPHRLFFQGSVRIESLPSYKLKTVDPHTIHMIKQRFEASHSRMAAAFPGDPARVQALKQEQRRQLLLLERKGHLLPDLPVDWLPDIVPEGCDDSDEG 119
            MHHE WLGFS +GK VG+G GFSP RL    +V +E+ P Y+LK V    IH +  R +AS  ++  A+ GDP + + +K +    L +L   G    DL   WLP  V     +SD G
Sbjct:  344 MHHEDWLGFSEDGKTVGSGAGFSPWRLMHAHAVHLEATPPYELKLVQDDVIHRVDMRQQASWEKLPVAYVGDPEKQKRVKLDHADSLRILRTTGTKAFDLDTSWLPLQVSGDDSESDPG 462
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BLAST of mRNA_E-siliculosus-1a_F_contig14468.2611.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.680e-18
Identity = 51/110 (46.36%), Postives = 65/110 (59.09%), Query Frame = 0 
Query:    1 MHHERWLGFSANGKEVGTGDGFSPHRLFFQGSVRIESLPSYKLKTVDPHTIHMIKQRFEASHSRMAAAFPGDPARVQALKQEQRRQLLLLERKGHLLPDLPVDWLPDIVP 110
            +HH+ WLGFSA+GK VGTG GF+  RL  +  VR+E  PSY LKTVD   I  I+ R EAS  R+ A    DP +V+A   +  R L +  R+     DL  +WLPD  P
Sbjct:  614 LHHDDWLGFSADGKTVGTGAGFTGWRLMRERDVRLEETPSYLLKTVDEEIIRKIQTRQEASWKRLPAFVSLDPEQVKAQHLDSLRVLRMQGRRNF---DLETNWLPDSFP 720
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14468.2611.1 vs. uniprot
Match: A0A6H5L233_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L233_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 9.560e-8
Identity = 31/71 (43.66%), Postives = 40/71 (56.34%), Query Frame = 0 
Query:    1 MHHERWLGFSANGKEVGTGDGFSPHRLFFQGSVRIESLPSYKLKTVDPHTIHMIKQRFEASHSRMAAAFPG 71
            MHHE WLGFS +GK VG+  GF P RL    +V +++ P Y+LK V    IH    R +AS   +  A  G
Sbjct:  161 MHHEDWLGFSEDGKTVGSRAGFRPWRLMHAHAVYLKATPPYELKLVQDEIIHRGDLRQQASWENLPVANAG 231
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14468.2611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KL03_9PHAE8.960e-1941.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJG9_9PHAE1.680e-1846.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L233_9PHAE9.560e-843.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14468contigE-siliculosus-1a_F_contig14468:175..905 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14468.2611.1mRNA_E-siliculosus-1a_F_contig14468.2611.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14468 175..905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14468.2611.1 ID=prot_E-siliculosus-1a_F_contig14468.2611.1|Name=mRNA_E-siliculosus-1a_F_contig14468.2611.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=162bp
MHHERWLGFSANGKEVGTGDGFSPHRLFFQGSVRIESLPSYKLKTVDPHT
IHMIKQRFEASHSRMAAAFPGDPARVQALKQEQRRQLLLLERKGHLLPDL
PVDWLPDIVPEGCDDSDEGLHVGGNDDGASDTDEIQSDHDSSEDEDEHGH
CAAAGRVQGRLP
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