prot_E-siliculosus-1a_F_contig1445.2602.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1445.2602.1
Unique Nameprot_E-siliculosus-1a_F_contig1445.2602.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length85
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: D8LSC2_ECTSI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC2_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.000e-47
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 0
Query:    1 GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYVDRSFLLHTPEQVRMLLDCD 84
            GLQERSLSA LRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGY DRSFLLHTPEQVRMLLDCD
Sbjct:  283 GLQERSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYADRSFLLHTPEQVRMLLDCD 366          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: W7T6J5_9STRA (Conserved oligomeric Golgi complex subunit 6 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6J5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.070e-17
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    1 GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYVDR-SFLLHTPEQVRMLLDCD 84
            GL   S++  + +FY  LFTL  P FERL++P  RA AR+ T+ ++A+ HE  H L  R +SGY D  +FL HTPEQV++LLDCD
Sbjct:  636 GLDSESVTRTMEAFYRGLFTL--PQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILLDCD 718          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: A0A836CBI3_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 8.380e-16
Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    1 GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYVDR-SFLLHTPEQVRMLLDCD 84
            GL+  ++++A+ +FYS+LF+L MP+ ER+R P  +  AR+ ++  +A+AH  +H ++S   +GY D  SFL HTP+QVR++LDCD
Sbjct:  588 GLEAHTVASAMAAFYSALFSLTMPELERVRAPLVKGRARQLSSRQIADAHAHLHGVLSAPAAGYRDAASFLSHTPDQVRIILDCD 672          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: A0A7S2S2C7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.140e-15
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYVDRSFLLHTPEQVRMLLDC 83
            GL   S+  A+  FYS++F L +P FERL     R  AR+  A  +A AH++V+ LV    + Y D SFL HTPEQVRMLLDC
Sbjct:  646 GLDAASVERAMLDFYSTIFALAVPSFERLAPLEVREAARKGVAERIANAHQSVYNLVKDPANKYGDSSFLQHTPEQVRMLLDC 728          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: A0A7S2SLV6_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SLV6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.260e-13
Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 0
Query:    1 GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYVD----RSFLLHTPEQVRMLLD 82
            G+   SL +AL SFY SLF+LVMP+F+RL  P  RA AR +TA  +A ++E  +  V  ++   +D    +  LLH P+QVR L+D
Sbjct:  555 GMDIESLRSALDSFYKSLFSLVMPEFDRLTSPRLRASARNATAQTIANSYEAFYNAVMDKERSGIDEASLKGILLHNPQQVRQLVD 640          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: A0A7R9UAD7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAD7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.560e-12
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    6 SLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYVDRSFLLHTPEQVRMLLD 82
            ++   + +F  +LFT+ +PDFER+  P  +  AR  T   VA+ + T+  +V  E  GY DRSFL+H PEQVR+LLD
Sbjct:  336 AVRVVIDAFNGALFTIFVPDFERITDPDEKNTARVDTMTKVADGYATIWEMVMDEKQGYADRSFLVHAPEQVRILLD 412          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: B8BWC7_THAPS (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWC7_THAPS)

HSP 1 Score: 65.9 bits (159), Expect = 1.190e-10
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    1 GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYVDRSFLLHTPEQVRMLL 81
            GL +  + AA++ FYSSLF+  +P FE ++ P  R  AR  TA+ V + +  ++  ++ E  GY D +FL H P+QV+ LL
Sbjct:  793 GLSQSEVEAAMKQFYSSLFSPPIPTFEEIKDPELRKFARSKTALRVVDVYRELYDAMTSEKGGYADFAFLGHEPDQVKTLL 873          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: A0A8J2SC57_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC57_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.600e-10
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    2 LQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSG-YVDRSFLLHTPEQVRMLLD 82
            +   +LSAALR+FYS+LF    PD   +     RA+A+   A ++A AH +V+ L + E +G Y +  FL+H+P+QVR+LLD
Sbjct:  625 ISRETLSAALRAFYSALFQDPAPDLGAIAPDARRAEAKSLCAKILAHAHASVYALAADEGTGGYGETDFLVHSPDQVRVLLD 706          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: A0A7S3LLI7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LLI7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.900e-10
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    1 GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYVDRSF---LLHTPEQV-RMLLD 82
            G+   SL AA   FY S+F++VMP+F+RL  P  R  AR STA  +A  +  ++  +S  +SGY        L+H PEQV + +LD
Sbjct:  333 GMDPASLQAAFSKFYQSMFSMVMPEFDRLNNPRLRTTARNSTARSIAMGYVRLYNALSNPESGYSKEELERILVHAPEQVSKYILD 418          
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Match: A0A2R5GVE9_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVE9_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.660e-9
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    1 GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHR-LVSREDSGYVDR---SFLLHTPEQVRMLLD 82
            G+   +L   L SFY S+F+LVMP+F+RL  P  RA AR +TA  +A  +E  +  L     SGY      + LLH P+QVR LLD
Sbjct:  601 GMTLDALREVLDSFYKSMFSLVMPEFDRLSSPRLRASARNATAGAIAATYEQFYATLQDLSRSGYQPAQLSNILLHDPQQVRQLLD 686          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1445.2602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LSC2_ECTSI3.000e-4797.62Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
W7T6J5_9STRA1.070e-1750.59Conserved oligomeric Golgi complex subunit 6 n=5 T... [more]
A0A836CBI3_9STRA8.380e-1644.71Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S2S2C7_9STRA2.140e-1549.40Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S2SLV6_9STRA4.260e-1344.19Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7R9UAD7_9STRA2.560e-1244.16Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
B8BWC7_THAPS1.190e-1039.51Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A8J2SC57_9STRA1.600e-1042.68Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S3LLI7_9STRA3.900e-1040.70Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A2R5GVE9_9STRA2.660e-944.19Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1445contigE-siliculosus-1a_F_contig1445:65..618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1445.2602.1mRNA_E-siliculosus-1a_F_contig1445.2602.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1445 65..618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1445.2602.1 ID=prot_E-siliculosus-1a_F_contig1445.2602.1|Name=mRNA_E-siliculosus-1a_F_contig1445.2602.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=85bp
GLQERSLSAALRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAH
ETVHRLVSREDSGYVDRSFLLHTPEQVRMLLDCD*
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