prot_E-siliculosus-1a_F_contig1444.2598.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1444.2598.1
Unique Nameprot_E-siliculosus-1a_F_contig1444.2598.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length545
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1444.2598.1 vs. uniprot
Match: A0A6H5KWT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT0_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 2.740e-73
Identity = 134/193 (69.43%), Postives = 141/193 (73.06%), Query Frame = 0 
Query:  352 KDAIGDVLALAQKGGGAEEVRRPSPVRRLIGECKTAVVVHEGGAVEGAPGVAPRLEKDVAITNAQDGHDVVVGTAGTGDGQDGRGGLQEKCEEQQHRVPELSSLTPSTKMEKATKKSWWGGPRTPNRKIRHPCKIPPRELVPEQAQEQRREQPEEPVHESELPAAAFPATSNRAAPERRSWLSFKWNRRNISA 544
            KDAIGDV A+AQKGGGAE  RRPS VRR  GECKTAVVVHEGGAVEGAPGV   LEK+ AITNAQDGH VVV  AGTGDGQDGRGGL+EK EEQQHR PELSSLTPSTK                          PP+E VPEQA+         PVHESELPAAA PAT+NRAAPERRSWLSFKWNRRN+SA
Sbjct:   13 KDAIGDVPAVAQKGGGAEVGRRPSLVRRFSGECKTAVVVHEGGAVEGAPGVTITLEKEAAITNAQDGHGVVVEKAGTGDGQDGRGGLKEKLEEQQHRAPELSSLTPSTKS-------------------------PPQERVPEQAEXXXXXXXXXPVHESELPAAASPATTNRAAPERRSWLSFKWNRRNVSA 180
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWT0_9PHAE2.740e-7369.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1444contigE-siliculosus-1a_F_contig1444:17294..20088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1444.2598.1mRNA_E-siliculosus-1a_F_contig1444.2598.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1444 17294..20109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1444.2598.1 ID=prot_E-siliculosus-1a_F_contig1444.2598.1|Name=mRNA_E-siliculosus-1a_F_contig1444.2598.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=545bp
MESFTETKALGEEMADNLWGTGQRDFRAVTGGTEASDGSDFTPEQLAVMR
KRFSVQGMPLPDGVEHVEWQPPASTGLEHSSAIFNTISDQEGVLRRSSAG
LNKDNCHFRSWQEDNGVAKTFASDTVVKDVDGVTRSVTIARGFPQLAGRS
KSMPPADLRSSHARAQSKAIRPVVRPGTRIVSPSMGMPFRRAKPGPVSAT
EGSGQGRLQFTEEDENGSDESESPMPPGPSKDTVKGVEEGKELSENGRDS
AVGETGAETSDGSSKQTSLMARRPSCTSSNVAGDAPEITDGTKDSPQLED
GATDRVTTGPSLPSCTDGSKQACSQTPRRPSSGPASFHALHQPQNRRSLR
HKDAIGDVLALAQKGGGAEEVRRPSPVRRLIGECKTAVVVHEGGAVEGAP
GVAPRLEKDVAITNAQDGHDVVVGTAGTGDGQDGRGGLQEKCEEQQHRVP
ELSSLTPSTKMEKATKKSWWGGPRTPNRKIRHPCKIPPRELVPEQAQEQR
REQPEEPVHESELPAAAFPATSNRAAPERRSWLSFKWNRRNISA*
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