prot_E-siliculosus-1a_F_contig1441.2583.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1441.2583.1
Unique Nameprot_E-siliculosus-1a_F_contig1441.2583.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length408
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1441.2583.1 vs. uniprot
Match: D7G8L6_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L6_ECTSI)

HSP 1 Score: 768 bits (1984), Expect = 7.600e-280
Identity = 383/407 (94.10%), Postives = 391/407 (96.07%), Query Frame = 0 
Query:    1 MWVAWRSFYIVYSCGILEQWGYLAAPTNPTTSTSILRNSTNNSTGRSEPVAQRDAPDVETGEKSDTFSTSEAEDTRPNPRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGREGETVPKAKYADDVVLPLHKCLCQKKDSEFPEPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLGTMKKRLLKKKQYQSPRGQQKFRTDLEKIWVNCCKYAGYKPGSSDDRAGIVTCTLILETMIERYYADYMEQQELVVDEGSWQAGRERRKREQFARIAHTPLNPALWPNGTCADQLDPVDGTDEETDSDDENMRIGDSVSHKRKFGSDSSEGQAALNTTAHASNSSAPLVDGAGSSAGGRFACNVEGLDQNMCALAAIGENLGGSSSKR 407
            MWVAWRSFYIVYSCGILEQWGYL APTNPTTSTSI+R+STNNSTG SEPVAQRD PDVETGEKSDTFSTSEAEDTRPNPRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGREGETVPK KYADDVVLPLHKCLCQ KDSEFPEPKKGKDPQAHLLKHLLRHDLSVMFREPVDVE NPGYLGVVTREDMMDLGTMK+RLLKKKQYQSPRGQQKFRTDLEKIWVNC KYAGYKPGSSDDRAGIV CTLIL+TMIERYYADYMEQQELVVDE SWQAGRERRKREQFARIAHTPLNPALWPNGTCADQLDPVDG+DEETDSDDENMR+GDS+ HKRKFGSD SE QAALNTTAHAS SSAPLVDG GSSAG R ACNVEGLDQNMCALAAIG+NLGGSSSKR
Sbjct:    1 MWVAWRSFYIVYSCGILEQWGYLEAPTNPTTSTSIVRDSTNNSTGVSEPVAQRDTPDVETGEKSDTFSTSEAEDTRPNPRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGREGETVPKTKYADDVVLPLHKCLCQTKDSEFPEPKKGKDPQAHLLKHLLRHDLSVMFREPVDVETNPGYLGVVTREDMMDLGTMKRRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKYAGYKPGSSDDRAGIVMCTLILKTMIERYYADYMEQQELVVDERSWQAGRERRKREQFARIAHTPLNPALWPNGTCADQLDPVDGSDEETDSDDENMRLGDSICHKRKFGSDDSEEQAALNTTAHASISSAPLVDGGGSSAGVRVACNVEGLDQNMCALAAIGKNLGGSSSKR 407
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BLAST of mRNA_E-siliculosus-1a_F_contig1441.2583.1 vs. uniprot
Match: A0A6H5LCM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCM5_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 8.930e-92
Identity = 155/224 (69.20%), Postives = 167/224 (74.55%), Query Frame = 0 
Query:   25 APTNPTTSTSILRNSTNNSTGRSEPVAQRDAPDVETGEKSDTFSTSEAEDTRPNPRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGREGETVPKAKYADDVVLPLHKCLCQKKDSEFPEPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLGTMKKRLLKKKQYQSPRGQQKFRTDLEKIWVNCCKYAGYKPGSSDDRAG 248
            APTNP TST I+ +STNNSTG S+P+AQRDAPDVETGEKSDTFS SEAEDTR  PRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGREGET+PKA+               ++  EFP+PKKGKDPQAHLLKH++RH   V                        DLGTM+KRL KKKQYQSPRGQ KFRTDLEK WV C KYAGYK GSSDDRAG
Sbjct:  245 APTNPITSTYIVSDSTNNSTGLSDPIAQRDAPDVETGEKSDTFSASEAEDTRSIPRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGREGETLPKAR---------------RRTQEFPKPKKGKDPQAHLLKHIVRHGHDV------------------------DLGTMEKRLFKKKQYQSPRGQPKFRTDLEKFWVKCWKYAGYKAGSSDDRAG 429
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BLAST of mRNA_E-siliculosus-1a_F_contig1441.2583.1 vs. uniprot
Match: D8LL59_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL59_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 6.260e-31
Identity = 83/235 (35.32%), Postives = 120/235 (51.06%), Query Frame = 0 
Query:   76 RPNPRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCA--------------GREGETVPKAKYADDVVLPLHKCLCQKKDSEFPEPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLGTMKKRLLKKKQYQSPRGQQKFRTDLEKIWVNCCKYAGY----KPGSSDDRAGIVTCTLILETMIERYYADYME--QQELVVDEGSWQAGRERRKRE 290
            R    DR  H   C+ C+    E   + +CE CPR  C +C               G++  ++   K  D  +    +C  + KD+EF  P  G  P  HLL  LLRHDLS+ FREPVD+  +P Y+  + R  MMDLGTM  +L + K+Y   RG  +F+ DL +IW NC ++AG     +P   +   GIV C L LE M +++ + YM   Q+     E +W   R+R++RE
Sbjct:  327 REGAEDRSSHLMDCASCQHSLPEGDPIGRCERCPRSFCSQCLERGLVEQGVELEALGQDCRSLLNGKQGDISIARCPECF-RGKDNEFAPPPPGGAPMDHLLSELLRHDLSLCFREPVDIVKHPDYVESIGRNAMMDLGTMLSKL-QGKRYPRRRGPGQFQEDLNRIWRNCRRFAGCDELGRPHYGNTVPGIVRCALTLEAMSDKFISSYMSDNQETAAWQESTWDFHRQRQERE 559
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1441.2583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8L6_ECTSI7.600e-28094.10Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5LCM5_9PHAE8.930e-9269.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL59_ECTSI6.260e-3135.32Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainSMARTSM00297bromo_6coord: 148..269
e-value: 0.0011
score: 20.1
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 161..237
e-value: 9.7E-12
score: 44.8
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 167..243
score: 9.366
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 138..279
e-value: 5.4E-17
score: 63.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 161..272
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING 2A-RELATEDcoord: 102..287
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 102..287
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 80..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1441contigE-siliculosus-1a_F_contig1441:8348..10026 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1441.2583.1mRNA_E-siliculosus-1a_F_contig1441.2583.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1441 7489..10026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1441.2583.1 ID=prot_E-siliculosus-1a_F_contig1441.2583.1|Name=mRNA_E-siliculosus-1a_F_contig1441.2583.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=408bp
MWVAWRSFYIVYSCGILEQWGYLAAPTNPTTSTSILRNSTNNSTGRSEPV
AQRDAPDVETGEKSDTFSTSEAEDTRPNPRDRYRHCTFCSVCEKPRTEPK
AVAKCEACPRILCRKCAGREGETVPKAKYADDVVLPLHKCLCQKKDSEFP
EPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLG
TMKKRLLKKKQYQSPRGQQKFRTDLEKIWVNCCKYAGYKPGSSDDRAGIV
TCTLILETMIERYYADYMEQQELVVDEGSWQAGRERRKREQFARIAHTPL
NPALWPNGTCADQLDPVDGTDEETDSDDENMRIGDSVSHKRKFGSDSSEG
QAALNTTAHASNSSAPLVDGAGSSAGGRFACNVEGLDQNMCALAAIGENL
GGSSSKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR036427Bromodomain-like_sf
IPR001487Bromodomain