prot_E-siliculosus-1a_F_contig1440.2580.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1440.2580.1
Unique Nameprot_E-siliculosus-1a_F_contig1440.2580.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length361
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1440.2580.1 vs. uniprot
Match: A0A6H5JRU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU2_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 4.840e-26
Identity = 112/236 (47.46%), Postives = 131/236 (55.51%), Query Frame = 0 
Query:    1 MAAARERLVVSSEKLRFAFSSFEAVNEEVVARTTGVDALPLSQATARRVSEAASMAKTVALSVLKAAEAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMESEFDPPVVRDRRKQSRDNSSGTGSGHADSMSSAGLEAETGDIMVEVKTGESDMSDEAEEEGHCTPPATEDRGEENESSHDDNAVSAFG-----STDQETLEEAEATPERDGGE 231
            M AARERL  SSEKLR AF+S  AV+ E  ARTT V  LPLS AT+R VS+AA MAKTVAL+VLKAAE A A                    XXXXXXXX                     ++SE DPP V +RR  S DNS   GS    SMSS G+E  T ++ V VKT ESDMSD +EE+   +    +  G E+ESS DD+  S  G     S DQE  +EAEAT   DGG+
Sbjct:   51 MEAARERLTDSSEKLRLAFASLHAVDGEFAARTTDVGTLPLSLATSR-VSQAAGMAKTVALTVLKAAEEAMAAATTARAEAVSAFAIKATTAXXXXXXXXAVKAQGMAKATAT------VTLKSETDPPTVMERRIPSGDNSGSNGSC---SMSSTGMEVATSNMAVAVKTSESDMSD-SEEQQKLSQHDVKATGGEHESSRDDDVTSEVGNADFRSADQERQKEAEATLGIDGGQ 275
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BLAST of mRNA_E-siliculosus-1a_F_contig1440.2580.1 vs. uniprot
Match: A0A6H5KPJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ3_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 7.870e-7
Identity = 54/123 (43.90%), Postives = 62/123 (50.41%), Query Frame = 0 
Query:  120 TAMESEFDPPVVRDRRKQSRDNSSGTGSGHADSMSSAGLEAETGDIMVEVKTGESDMSDEAEEEGHC-----------TPPATEDRGEENESSHDDNAVSAFGSTDQETLEEAEATPERDGGE 231
            T ++SE DP V   RR  S   S   GSG   S S +G+EAE G +   VKT ESDMS+                   TP  TED GEE+ESSHD   VS  G+ D E   EAE TP   GGE
Sbjct:   54 TYVKSEMDPSVNY-RRTPSGYKSGNKGSG---STSCSGVEAENGGVTATVKTWESDMSEXXXXXXXXXXXXXXXXXEDTPQDTEDIGEEHESSHDGGLVSESGNADHERHGEAEVTPGMAGGE 172
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1440.2580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRU2_9PHAE4.840e-2647.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPJ3_9PHAE7.870e-743.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..125
NoneNo IPR availableCOILSCoilCoilcoord: 230..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1440contigE-siliculosus-1a_F_contig1440:24667..29946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1440.2580.1mRNA_E-siliculosus-1a_F_contig1440.2580.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1440 13913..29946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1440.2580.1 ID=prot_E-siliculosus-1a_F_contig1440.2580.1|Name=mRNA_E-siliculosus-1a_F_contig1440.2580.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=361bp
MAAARERLVVSSEKLRFAFSSFEAVNEEVVARTTGVDALPLSQATARRVS
EAASMAKTVALSVLKAAEAAEAAAATAEAVVSAVQEAKSAAAAKLSAAKA
AVEAAQAAKAAAEAAKAAATAMESEFDPPVVRDRRKQSRDNSSGTGSGHA
DSMSSAGLEAETGDIMVEVKTGESDMSDEAEEEGHCTPPATEDRGEENES
SHDDNAVSAFGSTDQETLEEAEATPERDGGEEEEEEEKQEEEEEHEAKAR
RGKRKLGGTADHPLRSSKRAAGSRRPNYAESCSESYSESGSEYEDTMSSS
TSDIEHGDVALAVETSDAGMSENEADDNDTSPNVVPAAVSIDREKGDTTE
AIRGKHDGEEE
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