prot_E-siliculosus-1a_F_contig144.2573.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig144.2573.1
Unique Name	prot_E-siliculosus-1a_F_contig144.2573.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	520

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig144.2573.1 vs. uniprot
Match: D7G6H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H1_ECTSI)

HSP 1 Score: 669 bits (1726), Expect = 3.970e-237
Identity = 461/521 (88.48%), Postives = 471/521 (90.40%), Query Frame = 0

Query:    1 MATAGCMAWASVTSDLHPLRAAGYLILSVEALVVTFWWPRLYPPAGRKRSESSARHXXXXXXSRHLSSSGSADLFGGATPSPTINGQRSNTNGGKASSRWSGDSSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGFLGKEPLETFPEKRSAVDGDVRVPLPPKSRMRYARPVLLVLLTLSASYLTTWLLLSISSARASTAVDEDAMANTRNIEAMKKGAEVERRMREEREEGASRMELEAKALHEAVVAKEARQKXXXXXXXXXXXXXXXXXAEEKRLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAARLRQXXXXXXXXXXXXXXXXXXXXXXXXXXX--AKMAATLEQKRSIGLEDALTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQAVRPCTACRLTVAPEGRVELREEGKLLWSGGQRQKKARXXXXXXXXXRKRAPRANNDREGADGSDAFRLIITDDGNAILEREGSEVVWKALDR 519
            MATAGCMAWA VTSDLHPLRAAGYLILSVEAL VTFWWPRLYPPAGRKRSESSARH      SRHLS SGSADLFGGATPSPTINGQRSNTNGGKASSRWSGDSSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGFLG+EPLETFPEKRSAVDGD+RVPLPPKSRMRYARPVL+VLLTLSASYLTTWLLLSISSAR STAVDEDAM++TR+I AMKKGAE+ERR REEREEGA RMELE KAL EAV AKEA   XXXXXXXXXXXXXXXX AEEKRLEE   XXXXXXXXXXXXXXXXXXXXXXXXXXQAARLR+XXXXXXXXXXXXXXXXXXXXXXXXXXX  AKMAATLEQ RSIGLEDAL+NGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQA                 ELREEGKLLWSGGQRQK   XXXXXXXXXRKR P AN DREGADGSD FRLI+TDDGNAILEREGSEVVWKALDR
Sbjct:    1 MATAGCMAWARVTSDLHPLRAAGYLILSVEALTVTFWWPRLYPPAGRKRSESSARHRRQHRRSRHLSRSGSADLFGGATPSPTINGQRSNTNGGKASSRWSGDSSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGFLGEEPLETFPEKRSAVDGDMRVPLPPKSRMRYARPVLIVLLTLSASYLTTWLLLSISSARVSTAVDEDAMSSTRDIVAMKKGAEMERRTREEREEGARRMELEEKALREAVAAKEAXXXXXXXXXXXXXXXXXXXDAEEKRLEEARAXXXXXXXXXXXXXXXXXXXXXXXXXXQAARLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKMAATLEQTRSIGLEDALSNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQA-----------------ELREEGKLLWSGGQRQKXXXXXXXXXXXXRKRVPSAN-DREGADGSDMFRLIVTDDGNAILEREGSEVVWKALDR 503

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig144.2573.1 vs. uniprot
Match: A0A6H5L6N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N1_9PHAE)

HSP 1 Score: 637 bits (1643), Expect = 2.680e-224
Identity = 435/519 (83.82%), Postives = 445/519 (85.74%), Query Frame = 0

Query:    1 MATAGCMAWASVTSDLHPLRAAGYLILSVEALVVTFWWPRLYPPAGRKRSESSARHXXXXXXSRHLSSSGSADLFGGATPSPTINGQRSNTNGGKASSRWSGDSSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGFLGKEPLETFPEKRSAVDGDVRVPLPPKSRMRYARPVLLVLLTLSASYLTTWLLLSISSARASTAVDEDAMANTRNIEAMKKGAEVERRMREEREEGASRMELEAKALHEAVVAKEARQKXXXXXXXXXXXXXXXXXAEEKRLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAARLRQXXXXXXXXXXXXXXXXXXXXXXXXXXXAKMAATLEQKRSIGLEDALTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQAVRPCTACRLTVAPEGRVELREEGKLLWSGGQRQKKARXXXXXXXXXRKRAPRANNDREGADGSDAFRLIITDDGNAILEREGSEVVWKALDR 519
            MATAGC+AWASVTSDLHPL AAGYLILSVEALVVTFWWPRLYPPAGRKRSESS   XXXXXXSRHL SSGS   FGGATPSPTINGQR NTNGGKASSRWSGDSSGWWES+GGLEGLSEAGRSSAPSSLVSIGGR                F G+EPLETFPEKRSAVDGDVRVPLP KSRMRYARPVLLVLLTLSASYLTTWLLLSIS AR STAVDE AM+NTR+IEAMKK AEVERR+REEREE A+RMELE KAL EAV A      XXXXXXXXXXXXXXXXX        XXXXXXXXX           XXXXXXXXXQAARLR XXXXXXXXXXXXXXXXXXXXXXXXXXX KMAATLEQ+RSIGLEDALTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQAVRPCTACRLTVAPEGRVELREEGKLLWSGGQRQKKAR         RKR PRAN DREGADGS AFRL+ITDDGNAILEREGSEVVWKAL+R
Sbjct:    1 MATAGCIAWASVTSDLHPLSAAGYLILSVEALVVTFWWPRLYPPAGRKRSESSXXXXXXXXXSRHLGSSGSTVFFGGATPSPTINGQRFNTNGGKASSRWSGDSSGWWESDGGLEGLSEAGRSSAPSSLVSIGGRXXXXXXXXXXXXXXXXFFGEEPLETFPEKRSAVDGDVRVPLPSKSRMRYARPVLLVLLTLSASYLTTWLLLSISLARISTAVDEGAMSNTRDIEAMKKAAEVERRVREEREEAANRMELEEKALQEAVAAXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERRAREEQKAXXXXXXXXXQAARLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMAATLEQRRSIGLEDALTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQAVRPCTACRLTVAPEGRVELREEGKLLWSGGQRQKKARQQKRQTTQQRKRVPRAN-DREGADGSGAFRLVITDDGNAILEREGSEVVWKALNR 517

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig144.2573.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig144.2573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G6H1_ECTSI	3.970e-237	88.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L6N1_9PHAE	2.680e-224	83.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 227..247
None	No IPR available	COILS	Coil	Coil	coord: 286..368
None	No IPR available	PANTHER	PTHR15272	CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A	coord: 64..478
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 40..187
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..39
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 188..206
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 207..519
None	No IPR available	TMHMM	TMhelix		coord: 188..207
None	No IPR available	TMHMM	TMhelix		coord: 20..42
IPR036426	Bulb-type lectin domain superfamily	GENE3D	2.90.10.10		coord: 364..517 e-value: 9.7E-8 score: 34.0
IPR036426	Bulb-type lectin domain superfamily	SUPERFAMILY	51110	alpha-D-mannose-specific plant lectins	coord: 376..515

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig144	contig	E-siliculosus-1a_F_contig144:41778..47961 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig144.2573.1	mRNA_E-siliculosus-1a_F_contig144.2573.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig144 41008..48032 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig144.2573.1 ID=prot_E-siliculosus-1a_F_contig144.2573.1|Name=mRNA_E-siliculosus-1a_F_contig144.2573.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=520bp
MATAGCMAWASVTSDLHPLRAAGYLILSVEALVVTFWWPRLYPPAGRKRS
ESSARHRRQRRRSRHLSSSGSADLFGGATPSPTINGQRSNTNGGKASSRW
SGDSSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGG
GFLGKEPLETFPEKRSAVDGDVRVPLPPKSRMRYARPVLLVLLTLSASYL
TTWLLLSISSARASTAVDEDAMANTRNIEAMKKGAEVERRMREEREEGAS
RMELEAKALHEAVVAKEARQKQREAERRKYLERKALADAEEKRLEEARAL
REKQQREQRAREERRARDEKRAKDEQAARLRQQKAREERKARDAAAAKAK
LEAEQRKKRAKMAATLEQKRSIGLEDALTNGSTELRVMPNGDLVLADNGR
PVWTARGSKKRRSLVGWIWRKIRRQQAVRPCTACRLTVAPEGRVELREEG
KLLWSGGQRQKKARQKKRQTTQQRKRAPRANNDREGADGSDAFRLIITDD
GNAILEREGSEVVWKALDR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036426	Bulb-type_lectin_dom_sf