prot_E-siliculosus-1a_F_contig1433.2546.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1433.2546.1
Unique Nameprot_E-siliculosus-1a_F_contig1433.2546.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length333
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1433.2546.1 vs. uniprot
Match: D7FKP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKP8_ECTSI)

HSP 1 Score: 439 bits (1129), Expect = 3.970e-152
Identity = 260/334 (77.84%), Postives = 265/334 (79.34%), Query Frame = 0 
Query:    1 MSTTGKLSSYFTKRRGVTSSRAGPEELHVGSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEQRQGGGQEGGDAGERGSFCFNFNPADASDGPTRVPESNGARRRSGDASGLRAAQDFLTVVEKSGAQPNGKKKRTGXXXXXXXXXXX--KGEAQQSREQKSQDPVGEGPEQEIVVDCPTTSSHGTVGDGXXXXXXXXXXXXXXXXXXXXXXXXXHRQRPPGLRPPPGFTLESWKDPAITGEERRRRRFGSGVRNMVAIQRSCDARRGLIADGEVGEEKLPERKGEGLGRPGCDRARGMVGAGAPGSTAGGGSSVFAFGFDIGISFDGGN 332
            MSTTG LSSYFTKRR V SSRAGPEELHV SSSS                              DEQRQGGGQEGGDAGERGSFCFNFNPADAS  PT VPESNGA+RRSGDAS LRAAQDFLTVVEKSGAQP+GKKKRTGXXXXXXXXXXX  KGEAQQSREQKSQDPVGEGPEQ+ VVDCPT S H TVGDG               XXX       HRQRPPGLRPPPGFTLESWKDPAITGEERRRRRFGSGVRNMVAIQRSCDARRGLI DGEVGEEKLPER+G GLGRPGCDRARGMVGAGAPGST GGGSSVFAFGFDIGISFDGG+
Sbjct:    1 MSTTGTLSSYFTKRREVKSSRAGPEELHVDSSSSSGSVRARLEKKLQVKQKTGFAFNFAVDSDADEQRQGGGQEGGDAGERGSFCFNFNPADAS-APTCVPESNGAKRRSGDASSLRAAQDFLTVVEKSGAQPSGKKKRTGXXXXXXXXXXXXGKGEAQQSREQKSQDPVGEGPEQDNVVDCPTFSGHCTVGDGGGEATSSAVASLPAAXXXDSSPKREHRQRPPGLRPPPGFTLESWKDPAITGEERRRRRFGSGVRNMVAIQRSCDARRGLIPDGEVGEEKLPERQGGGLGRPGCDRARGMVGAGAPGSTTGGGSSVFAFGFDIGISFDGGS 333
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BLAST of mRNA_E-siliculosus-1a_F_contig1433.2546.1 vs. uniprot
Match: A0A836CBN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.910e-6
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0 
Query:  229 PGFTLESWKDPAITGEERRRRRFGSGVRNMVAIQRSCDARRGLIADGEVGEEKLPER 285
            PG +LESWKDP +T  ERR+ R+GSGVRN+ AIQR   A  G     E G+ + P++
Sbjct:  122 PGLSLESWKDPTLTEAERRKLRYGSGVRNIAAIQRRTKAV-GAATSQEPGDAEPPQQ 177
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1433.2546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKP8_ECTSI3.970e-15277.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBN0_9STRA1.910e-650.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1433contigE-siliculosus-1a_F_contig1433:23730..26065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1433.2546.1mRNA_E-siliculosus-1a_F_contig1433.2546.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1433 23672..26573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1433.2546.1 ID=prot_E-siliculosus-1a_F_contig1433.2546.1|Name=mRNA_E-siliculosus-1a_F_contig1433.2546.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=333bp
MSTTGKLSSYFTKRRGVTSSRAGPEELHVGSSSSSSSVRARLEKKLQVKQ
KTGFAFNFAVDSDADEQRQGGGQEGGDAGERGSFCFNFNPADASDGPTRV
PESNGARRRSGDASGLRAAQDFLTVVEKSGAQPNGKKKRTGAGKKKKKKK
GGKGEAQQSREQKSQDPVGEGPEQEIVVDCPTTSSHGTVGDGGGEATSSA
AASLPAAAASDSSPKREHRQRPPGLRPPPGFTLESWKDPAITGEERRRRR
FGSGVRNMVAIQRSCDARRGLIADGEVGEEKLPERKGEGLGRPGCDRARG
MVGAGAPGSTAGGGSSVFAFGFDIGISFDGGN*
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