prot_E-siliculosus-1a_F_contig1432.2541.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1432.2541.1
Unique Nameprot_E-siliculosus-1a_F_contig1432.2541.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length833
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2541.1 vs. uniprot
Match: A0A6H5JSB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB3_9PHAE)

HSP 1 Score: 1228 bits (3178), Expect = 0.000e+0
Identity = 752/902 (83.37%), Postives = 770/902 (85.37%), Query Frame = 0
Query:    1 MDIAEEMTAVAAVRLLASSPQDEEGIGLQCSREALVSSLERDLQGPRVRATLQGLYDMLVDGEQSHRAAVGEVLDTVSWEAFGLVVGCLERFATSPSPNSSGSVTGTFDKSSDEAETLTTSRDADDCAALSEGLALAMAEIFSPKELHLMTLEHLHAYTKARTLRVVLTILRRSTQRMATARRSKFLEASLRPALEATKRVGLVAAAGDAQAEPGLPQKSSGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADEDMLSRAAYDAAASAAETAADFVGPLMEQASAERALLAVSGLPTAGRGEGRPAAAAVATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXXXXXXXXXXXGSEDNPPAGESLARAQERLVGIVVDSPLDLRFVLLHGCRVSYASGVKRRRRRSEGGGEEGESQLPATRLGGAVGLGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRDRSKRVASKGLELACFVAERLGGFPDRTGAFAFDWEPGDEEIDGAGDXXXXXXXXXXXXREEARLCFA--------------------------------------------QRGAV--SSTTSEGTSPSSRRRPFDPHRLDLAGFLQVLVDVMVSCPLPGLRTRGHAALVALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXPS-------------------------LSSSSPFASALAGDVVCGQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNRLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQELELAVV 831
            MDI EEMTAVA VRLLAS  QDEEGIG QCSRE LVSSLERDLQGPRVRATLQGL+DMLVDGEQ+H   VGEVLDTVSWEAFGLVVGCLERFATS S N+S S+TGTF+KSSDEAETLTTSRDADDCAALSE LALAMAEIFSPKELHLM LEHLHAYTKARTLRVVLTILRRSTQ+M TARR KFLEASLRPALEATKRVGLVAAAGDA AEPGLPQKSSGSD   XXXXXXXXXXXXXXXXX           TADEDM SRAAYDAAASAAETAADF+GPLMEQASAE+ALLAVS +PTAGRGEGRPAAA VATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVC  XXXXXXXXXX GSEDNPPA ESLARAQERLVGIVVDSPLDLRFVLLHG RVS+ASGVKRRR+RSEGGGE+GES LPA +LGGAVGLGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAE LMRDRSKRVA+KGLELACFVAERLGGFPDRTGAFAFDWEPGDEEIDGAGD XXXXXXX    REEA   +                                             QR A   SST SE T+PSSRRR FDPH LDLAGFLQVLVDVMVSCPLPGLRTRGHAAL+ALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXX                           LSSSSPFASALAGDVVC QLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQN+LLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQELELA V
Sbjct:    1 MDIGEEMTAVAVVRLLASPAQDEEGIGQQCSREQLVSSLERDLQGPRVRATLQGLHDMLVDGEQNHSTPVGEVLDTVSWEAFGLVVGCLERFATSASSNNSDSITGTFEKSSDEAETLTTSRDADDCAALSERLALAMAEIFSPKELHLMALEHLHAYTKARTLRVVLTILRRSTQQMVTARRWKFLEASLRPALEATKRVGLVAAAGDAPAEPGLPQKSSGSDADEXXXXXXXXXXXXXXXXXLP---------TADEDMPSRAAYDAAASAAETAADFIGPLMEQASAEQALLAVSRVPTAGRGEGRPAAAVVATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCCTXXXXXXXXXX-GSEDNPPARESLARAQERLVGIVVDSPLDLRFVLLHGYRVSFASGVKRRRKRSEGGGEKGESHLPAAKLGGAVGLGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEALMRDRSKRVANKGLELACFVAERLGGFPDRTGAFAFDWEPGDEEIDGAGDDXXXXXXXNGGGREEAHTPYGHTRTSAHNYEFYGCPDLLSHRYFTIFRPPPTPFHPFRRDVAAWQQRDADAGSSTISENTNPSSRRRLFDPHHLDLAGFLQVLVDVMVSCPLPGLRTRGHAALMALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNKLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQELELAAV 892          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2541.1 vs. uniprot
Match: D7G1P6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P6_ECTSI)

HSP 1 Score: 1100 bits (2844), Expect = 0.000e+0
Identity = 670/831 (80.63%), Postives = 689/831 (82.91%), Query Frame = 0
Query:    1 MDIAEEMTAVAAVRLLASSPQDEEGIGLQCSREALVSSLERDLQGPRVRATLQGLYDMLVDGEQSHRAAVGEVLDTVSWEAFGLVVGCLERFATSPSPNSSGSVTGTFDKSSDEAETLTTSRDADDCAALSEGLALAMAEIFSPKELHLMTLEHLHAYTKARTLRVVLTILRRSTQRMATARRSKFLEASLRPALEATKRVGLVAAAGDAQAEPGLPQKSSGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADEDMLSRAAYDAAASAAETAADFVGPLMEQASAERALLAVSGLPTAGRGEGRPAAAAVATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXXXXXXXXXXXGSEDNPPAGESLARAQERLVGIVVDSPLDLRFVLLHGCRVSYASGVKRRRRRSEGGGEEGESQLPATRLGGAVGLGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRDRSKRVASKGLELACFVAERLGGFPDRTGAFAFDWEPGDEEIDGAGDXXXXXXXXXXXXREEARLCFAQRGAVSSTTSEGTSPSSRRRPFDPHRLDLAGFLQVLVDVMVSCPLPGLRTRGHAALVALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXPSLSSSSPFASALAGDVVCGQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNRLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQELELAVV 831
            MDIAEEMTA+AAV LLA SPQDEEGIGLQCSREALVSSLERDLQGPRVR TLQGLYDMLVDGE SHRAAVGEVLDTVSWEAFGLVVGCLERFATSPSPNSSGSVTGTF+KSSDEAETLTTSRDADDCAALSEGLALAMAEIFSPKELHLMTLEHLHAYTKART+RVVLTILRRST+RMATARRSKFLEASLRPAL+A KRVGLVAAAGDA AEPGL QKSSGSDXXXXXXXXXXXXXXXXXXXXXXX        TAD DM S AAYDAAASAAETAADF+GPLMEQASAERALLAVSGLPTAGRGEGRPAAAAVA   GGSG AVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXXXXXXXXX  GSEDNP AGESLARA+ERL+GIVVDSPLDLRF LLHGCRVSYASGVKRRRR+SEGGGEEG+SQLPA RLGGAVGL EAA+NGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRDRS+RVA+KGLELACFVAERLGGFPDR+GA+AFDWEPGDEEIDGAGD XXXXXX     R+E                                        VLVDVMVSCPLPGLRTRGHAALVA+L  ADEASRFR+LRRLVELCPWPN                                                              L RACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGAR  SGRAEAGAAWGRL LREPKKLLQNRLLVQGLLDELRGAVITA+NAGPEHFRLFILEDAAQQCLQELELAVV
Sbjct:    1 MDIAEEMTAMAAVGLLAFSPQDEEGIGLQCSREALVSSLERDLQGPRVRVTLQGLYDMLVDGEHSHRAAVGEVLDTVSWEAFGLVVGCLERFATSPSPNSSGSVTGTFEKSSDEAETLTTSRDADDCAALSEGLALAMAEIFSPKELHLMTLEHLHAYTKARTVRVVLTILRRSTERMATARRSKFLEASLRPALKAAKRVGLVAAAGDAPAEPGLRQKSSGSDXXXXXXXXXXXXXXXXXXXXXXXLLP-----TADGDMPSSAAYDAAASAAETAADFIGPLMEQASAERALLAVSGLPTAGRGEGRPAAAAVAXXXGGSGHAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXXXXXXXXXT-GSEDNPAAGESLARAEERLIGIVVDSPLDLRFALLHGCRVSYASGVKRRRRKSEGGGEEGKSQLPAARLGGAVGLAEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRDRSRRVANKGLELACFVAERLGGFPDRSGAYAFDWEPGDEEIDGAGDDXXXXXXWNGGGRQE----------------------------------------VLVDVMVSCPLPGLRTRGHAALVAILSGADEASRFRLLRRLVELCPWPN--------------------------------------------------------------LLRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARADSGRAEAGAAWGRLGLREPKKLLQNRLLVQGLLDELRGAVITANNAGPEHFRLFILEDAAQQCLQELELAVV 723          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSB3_9PHAE0.000e+083.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1P6_ECTSI0.000e+080.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 662..689
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 241..251
IPR013877YAP-binding/ALF4/GlomulinPFAMPF08568Kinetochor_Ybp2coord: 602..682
e-value: 4.3E-9
score: 35.4
IPR019516Glomulin/ALF4PANTHERPTHR15430FKBP-ASSOCIATED PROTEINcoord: 464..699

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1432contigE-siliculosus-1a_F_contig1432:16631..21454 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1432.2541.1mRNA_E-siliculosus-1a_F_contig1432.2541.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1432 16421..21959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1432.2541.1 ID=prot_E-siliculosus-1a_F_contig1432.2541.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2541.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=833bp
MDIAEEMTAVAAVRLLASSPQDEEGIGLQCSREALVSSLERDLQGPRVRA
TLQGLYDMLVDGEQSHRAAVGEVLDTVSWEAFGLVVGCLERFATSPSPNS
SGSVTGTFDKSSDEAETLTTSRDADDCAALSEGLALAMAEIFSPKELHLM
TLEHLHAYTKARTLRVVLTILRRSTQRMATARRSKFLEASLRPALEATKR
VGLVAAAGDAQAEPGLPQKSSGSDADEDPDDDGTGGDEEPPPPPPPPPPP
PLPLPTADEDMLSRAAYDAAASAAETAADFVGPLMEQASAERALLAVSGL
PTAGRGEGRPAAAAVATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALS
ALELAGETSVCCTAAAAAAAAAATGSEDNPPAGESLARAQERLVGIVVDS
PLDLRFVLLHGCRVSYASGVKRRRRRSEGGGEEGESQLPATRLGGAVGLG
EAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHA
EVLMRDRSKRVASKGLELACFVAERLGGFPDRTGAFAFDWEPGDEEIDGA
GDDGGGGGAWNGGGREEARLCFAQRGAVSSTTSEGTSPSSRRRPFDPHRL
DLAGFLQVLVDVMVSCPLPGLRTRGHAALVALLGAADEASRFRVLRRLVE
LCPWPNARGLLLDAFRREIDRALRQCGIEEEERQQQQQQQQQAAPAAPSL
SSSSPFASALAGDVVCGQLRRACRRGPLASLMADMDSRTGGLALARYAHK
LDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNRLLVQGLLDELRGAVI
TADNAGPEHFRLFILEDAAQQCLQELELAVVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019516Glomulin/ALF4
IPR013877YAP-bd/ALF4/Glomulin