prot_E-siliculosus-1a_F_contig1426.2510.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1426.2510.1
Unique Nameprot_E-siliculosus-1a_F_contig1426.2510.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length470
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2510.1 vs. uniprot
Match: A0A6H5J8Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Z5_9PHAE)

HSP 1 Score: 665 bits (1715), Expect = 1.110e-236
Identity = 376/470 (80.00%), Postives = 405/470 (86.17%), Query Frame = 0 
Query:    1 MDRKVRGSAMDLLAELTVLHSYIEKELEGVAVAVNDLFGKDHHAAA-TSARLQLSKKRILAALARQRILLWEFSTESEPAAVFARSEDSDGVFGSRHQNPIHEPAVGLIAD-KQCTACGPPGNPSNGLSGQPPERKLEEELQWKRGTLVRMKHLLRRKVGDLGATEAERGAIRRDMAKVDAALQELQDCQQGGLLPPRMNAGEDNEALGAPQPPKNETAREQDNSSSNNGRCYAESVLREVELRLPDGLDVLLGRIAEGVQPSRPRRPATTTDVSAPSTAMQPGTDSPCPVASEHVPKKNAGEETAEEASRQSGRAVGPDNRVGERCSGSRRSSERLPDAEREEARI--AANVSGQGLLNVSRVGAGHRTTMFAGAEEDLVLQQVKSCRQMKDGPKAVAMAARKEVAEGQAYNDSVLSVAAAAVNHGALNTKGLALSDTVAGRNRRKKPSHCIGGAFAGGLTGN-VGKEN 465
            MD  +RG AMDLLAELTVLHS++E+ELEGVAVAVNDLF +DH AAA TSARLQLSK RILAAL RQRILLWEFSTESEPAAVFARSEDSDG  GSRHQNPIH+PAVGLIAD KQCTACG PGNPS+GLSGQPP RKL+EELQWKR TLVRMKHLLRRK GDLGATEA RGAIRRDMAKVDAAL++LQ+CQ GGLLPP+M+AGEDN++LGA QP KNE AREQDNSS NNGRCYAESVLREVELRLPDGLDVLLGRIAEGV+PSR RRP TT D  APST MQPGTDSPCP+AS HVP+ N  +E A +A  QSGR VGP++RVGERCSGS RSSERL DAE EEAR   AAN  GQGLLNV RVG GHRT +FAGAEEDLVLQ+VKSC ++KD PKAV MAARK++AE    N SVLSVAAA VN GALNTKGLALS TV GRN+ KKPSH IGGAF GGL G  VGKEN
Sbjct:    1 MDHTIRGPAMDLLAELTVLHSHVERELEGVAVAVNDLFEEDHQAAASTSARLQLSKNRILAALTRQRILLWEFSTESEPAAVFARSEDSDGNLGSRHQNPIHKPAVGLIADNKQCTACGRPGNPSSGLSGQPPARKLDEELQWKRDTLVRMKHLLRRKAGDLGATEAARGAIRRDMAKVDAALRDLQECQLGGLLPPQMDAGEDNDSLGASQPQKNEKAREQDNSS-NNGRCYAESVLREVELRLPDGLDVLLGRIAEGVRPSRRRRPTTTADAPAPSTPMQPGTDSPCPMASYHVPENNTRKE-AVKAFGQSGRTVGPNDRVGERCSGSPRSSERL-DAESEEARKLRAANFRGQGLLNVGRVGTGHRTKIFAGAEEDLVLQEVKSCGRVKDSPKAVVMAARKDMAEEHTSNRSVLSVAAA-VNLGALNTKGLALSATVTGRNK-KKPSHRIGGAFTGGLAGGGVGKEN 465
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J8Z5_9PHAE1.110e-23680.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1426contigE-siliculosus-1a_F_contig1426:15711..17791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1426.2510.1mRNA_E-siliculosus-1a_F_contig1426.2510.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1426 15711..17959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1426.2510.1 ID=prot_E-siliculosus-1a_F_contig1426.2510.1|Name=mRNA_E-siliculosus-1a_F_contig1426.2510.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=470bp
MDRKVRGSAMDLLAELTVLHSYIEKELEGVAVAVNDLFGKDHHAAATSAR
LQLSKKRILAALARQRILLWEFSTESEPAAVFARSEDSDGVFGSRHQNPI
HEPAVGLIADKQCTACGPPGNPSNGLSGQPPERKLEEELQWKRGTLVRMK
HLLRRKVGDLGATEAERGAIRRDMAKVDAALQELQDCQQGGLLPPRMNAG
EDNEALGAPQPPKNETAREQDNSSSNNGRCYAESVLREVELRLPDGLDVL
LGRIAEGVQPSRPRRPATTTDVSAPSTAMQPGTDSPCPVASEHVPKKNAG
EETAEEASRQSGRAVGPDNRVGERCSGSRRSSERLPDAEREEARIAANVS
GQGLLNVSRVGAGHRTTMFAGAEEDLVLQQVKSCRQMKDGPKAVAMAARK
EVAEGQAYNDSVLSVAAAAVNHGALNTKGLALSDTVAGRNRRKKPSHCIG
GAFAGGLTGNVGKENAGCL*
back to top