prot_E-siliculosus-1a_F_contig1423.2494.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1423.2494.1
Unique Nameprot_E-siliculosus-1a_F_contig1423.2494.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length150
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: D8LEU3_ECTSI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU3_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 1.440e-103
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS
Sbjct:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A836CHF0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF0_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.480e-51
Identity = 80/153 (52.29%), Postives = 108/153 (70.59%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAE-GEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGA---ADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MIVC+A+I + N PL +RTY D   GE++ D  +R H+IVH+SLDVV E + G +           + DMFLGHLCP+DEY VYGY+TST++K+LAVLE+    R+ EL  +  T+H FYVNY  NPFSPL +P+ S +F+L+VDRQ+N YN+
Sbjct:    1 MIVCLAVISKANAPLLVRTYVDPSLGEDQADTTIRFHHIVHTSLDVVQEARAGDRHVPACRRWCAATRDMFLGHLCPMDEYEVYGYVTSTQVKILAVLEETVTSRKSELAALLHTIHGFYVNYQLNPFSPLNQPIGSERFKLAVDRQVNGYNA 153          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: W7T3S0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3S0_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.290e-37
Identity = 71/152 (46.71%), Postives = 99/152 (65.13%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVG---RKGASGAADVST-DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYN 148
            MI CIA++G++NE L+L+ +  A+ +   D  L  H I HS+LD   ER      R   S  +  ST DMFLG+LCPI+E+RVYGY TST++K LA+L + N +RE +LK VF  +H  YV+YL++PFSPL   + S +F   V+RQ+  YN
Sbjct:    1 MIACIAVVGKKNELLYLKPFL-AQPDASSDYFLSFHFIAHSALDAFDERSKSVSRRPSPSFPSPASTNDMFLGYLCPIEEFRVYGYKTSTQIKFLAILTENNPVRENDLKSVFQGLHILYVSYLQSPFSPLTGKITSERFSKGVERQVVVYN 151          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A8K1FMJ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMJ4_PYTOL)

HSP 1 Score: 124 bits (312), Expect = 7.680e-34
Identity = 68/149 (45.64%), Postives = 97/149 (65.10%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MI C+A+IG  N PLF+RT+       EED +L  H I H +LD++ E KV  +GAS  A    DM+LG L PI++YRVYGY+T+T +KL+A+LED + +RE EL+  FS +H  YVN + NPF+P+ + + S +F   V   +  +NS
Sbjct:    1 MISCVAVIGAANSPLFIRTF-------EEDEDLGFHYIAHVALDII-EEKV--RGASNIA-AKDDMYLGFLGPIEDYRVYGYVTNTSVKLVAILED-SPVRESELRSFFSELHKLYVNAVSNPFAPIGERITSQQFDKKVYNLVLQHNS 137          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: D0N1W2_PHYIT (Trafficking protein particle complex subunit 2-like protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0N1W2_PHYIT)

HSP 1 Score: 119 bits (297), Expect = 1.480e-31
Identity = 65/149 (43.62%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MI C+A+IG  N PL++RT+    GEE ED  L  H I H SLDV+ E+  G    +G      DM+LG L PI++YRVYGY+T+T +K + VL+D   +RE EL+  F+ VH  YVN + NPF+PL + + S  F   V   +  +N+
Sbjct:    1 MIACVAVIGAANSPLYIRTF----GEEGED--LGFHYIAHVSLDVIEEKLRG----AGITSSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPLGERLTSQTFDKRVSNLVVQHNT 138          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: K3WRF7_GLOUD (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF7_GLOUD)

HSP 1 Score: 117 bits (292), Expect = 8.420e-31
Identity = 62/149 (41.61%), Postives = 94/149 (63.09%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MI C+A+IG  N PL++RT+     +EEED  L  H I H SLD++ E K+   G   A D   DM+LG L PI++YRVYGY+T+T +K +A+++D + +RE EL+  F+ +H  YVN + NPF+P+ + + S  F   V   +  +N+
Sbjct:    1 MISCVAVIGAANSPLYVRTF-----DEEED--LGFHYIAHVSLDII-EEKLRSAGIMAAKD---DMYLGFLGPIEDYRVYGYVTNTSIKFVAIMQD-SPVRESELRSFFAEMHKMYVNAMSNPFAPIGERITSQNFEKKVYNLVLQHNT 137          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A7S2WDT6_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDT6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.870e-30
Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 0
Query:    2 IVCIAIIGRQNEPLFLRTYTDAEGE-------EEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRE--PELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQIND 146
            I C++++GR NEPLF+R Y   E          E+DA LR H ++H+SLDVV E+    +  S  A   T MFLG+LCP+DE+ +YGY+T+T  KL+  LED         ++  +F  +H+  +    NPF+PL K V S  F+  +D+ + +
Sbjct:   15 IACVSVVGRTNEPLFMRVYASEEAPFDALNPGSEQDA-LRFHYMIHASLDVVDEKHRPPRTESSPAPTKTSMFLGYLCPVDEFHLYGYVTNTHNKLIVALEDQAGTGGGIADMTGLFKRIHDLLIKQALNPFAPLGKVVASTNFQNGIDKLVQE 167          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: W4GM96_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GM96_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.840e-30
Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYN 148
            MI C+AI+G  N PLF+R Y        ED +L  H + H +LD+V ER    K          DM+LG L P++++RVYGY+T+T +KLLA+++D   ++E +++  FS +HN YVN + NPF+ L + + SAKF   V   +  +N
Sbjct:    1 MIACVAIVGANNNPLFVRAYA-------EDDDLSFHYVAHIALDIVEERVKQSKD---------DMYLGFLGPVEDFRVYGYVTNTLVKLLAIVQDT-PMKESDMRAFFSVMHNLYVNAMSNPFAVLGERIASAKFDRQVTSLVLQHN 131          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A7S3U8L7_9SPIT (Trafficking protein particle complex subunit 2-like protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U8L7_9SPIT)

HSP 1 Score: 112 bits (279), Expect = 9.760e-29
Identity = 57/145 (39.31%), Postives = 91/145 (62.76%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDS-AKFRLSVDRQI 144
            MIV +A++GR+N PL++R +   E   +  A LR H IVH+++D + E+    K + G      DM+LG L PI+EYRVYGYMT++R+KL+ VL+D  ++++ E++ +F  +H  YV+ + NPF  L   ++  A F   V R +
Sbjct:    1 MIVAVAVLGRENNPLYMRAF--GELSMDSTATLRFHFIVHAAIDYIEEKLGQAKTSPGNTAPKLDMYLGFLYPIEEYRVYGYMTNSRVKLITVLDD-EEVKDSEMRALFRRLHTLYVDTISNPFHKLDSELNGCASFEKQVGRVV 142          
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A6G0XKF3_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKF3_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.040e-28
Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MI C+AI+G  N PLF+R++       EE+  L  H I H +LD+V ER               DM+LG L P++++RVYGY+T+T +K L V+ D   ++E EL+  F+ VH  YVN + NPF+ L + + S KF+  V   +  +NS
Sbjct:    1 MIACVAIVGANNNPLFVRSF-------EEEDELSFHYIAHVALDIVEER---------VKQSRDDMYLGFLGPVEDFRVYGYITNTAVKFLTVVPDA-PVKESELRAFFAEVHKLYVNAMSNPFAQLGERITSNKFQTKVHGLVQQFNS 132          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU3_ECTSI1.440e-103100.00Trafficking protein particle complex subunit 2-lik... [more]
A0A836CHF0_9STRA6.480e-5152.29Trafficking protein particle complex subunit 2-lik... [more]
W7T3S0_9STRA4.290e-3746.71Trafficking protein particle complex subunit 2-lik... [more]
A0A8K1FMJ4_PYTOL7.680e-3445.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0N1W2_PHYIT1.480e-3143.62Trafficking protein particle complex subunit 2-lik... [more]
K3WRF7_GLOUD8.420e-3141.61Trafficking protein particle complex subunit 2-lik... [more]
A0A7S2WDT6_9STRA2.870e-3038.31Trafficking protein particle complex subunit 2-lik... [more]
W4GM96_9STRA8.840e-3039.86Trafficking protein particle complex subunit 2-lik... [more]
A0A7S3U8L7_9SPIT9.760e-2939.31Trafficking protein particle complex subunit 2-lik... [more]
A0A6G0XKF3_9STRA1.040e-2838.93Trafficking protein particle complex subunit 2-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.70coord: 1..148
e-value: 3.1E-35
score: 122.6
NoneNo IPR availablePANTHERPTHR12403:SF11TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2-LIKE PROTEINcoord: 1..148
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 7..142
e-value: 6.4E-25
score: 87.8
IPR006722Trafficking protein particle complex subunit 2PANTHERPTHR12403MBP-1 INTERACTING PROTEIN-2Acoord: 1..148
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1423contigE-siliculosus-1a_F_contig1423:7430..9418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1423.2494.1mRNA_E-siliculosus-1a_F_contig1423.2494.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1423 7302..10237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1423.2494.1 ID=prot_E-siliculosus-1a_F_contig1423.2494.1|Name=mRNA_E-siliculosus-1a_F_contig1423.2494.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=150bp
MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERK
VGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDI
REPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom_sf
IPR006722Sedlin