mRNA_E-siliculosus-1a_F_contig1423.2494.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1423.2494.1
Unique NamemRNA_E-siliculosus-1a_F_contig1423.2494.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: D8LEU3_ECTSI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU3_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 5.280e-98
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 575
            MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS
Sbjct:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
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BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A836CHF0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF0_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.770e-46
Identity = 80/153 (52.29%), Postives = 108/153 (70.59%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAE-GEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGA---ADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 575
            MIVC+A+I + N PL +RTY D   GE++ D  +R H+IVH+SLDVV E + G +           + DMFLGHLCP+DEY VYGY+TST++K+LAVLE+    R+ EL  +  T+H FYVNY  NPFSPL +P+ S +F+L+VDRQ+N YN+
Sbjct:    1 MIVCLAVISKANAPLLVRTYVDPSLGEDQADTTIRFHHIVHTSLDVVQEARAGDRHVPACRRWCAATRDMFLGHLCPMDEYEVYGYVTSTQVKILAVLEETVTSRKSELAALLHTIHGFYVNYQLNPFSPLNQPIGSERFKLAVDRQVNGYNA 153
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BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: W7T3S0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3S0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.410e-33
Identity = 71/152 (46.71%), Postives = 99/152 (65.13%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVG---RKGASGAADVST-DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYN 572
            MI CIA++G++NE L+L+ +  A+ +   D  L  H I HS+LD   ER      R   S  +  ST DMFLG+LCPI+E+RVYGY TST++K LA+L + N +RE +LK VF  +H  YV+YL++PFSPL   + S +F   V+RQ+  YN
Sbjct:    1 MIACIAVVGKKNELLYLKPFL-AQPDASSDYFLSFHFIAHSALDAFDERSKSVSRRPSPSFPSPASTNDMFLGYLCPIEEFRVYGYKTSTQIKFLAILTENNPVRENDLKSVFQGLHILYVSYLQSPFSPLTGKITSERFSKGVERQVVVYN 151
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BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A8K1FMJ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMJ4_PYTOL)

HSP 1 Score: 123 bits (308), Expect = 6.020e-30
Identity = 68/149 (45.64%), Postives = 97/149 (65.10%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 575
            MI C+A+IG  N PLF+RT+       EED +L  H I H +LD++ E KV  +GAS  A    DM+LG L PI++YRVYGY+T+T +KL+A+LED + +RE EL+  FS +H  YVN + NPF+P+ + + S +F   V   +  +NS
Sbjct:    1 MISCVAVIGAANSPLFIRTF-------EEDEDLGFHYIAHVALDII-EEKV--RGASNIA-AKDDMYLGFLGPIEDYRVYGYVTNTSVKLVAILED-SPVRESELRSFFSELHKLYVNAVSNPFAPIGERITSQQFDKKVYNLVLQHNS 137
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: D0N1W2_PHYIT (Trafficking protein particle complex subunit 2-like protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0N1W2_PHYIT)

HSP 1 Score: 117 bits (293), Expect = 8.510e-28
Identity = 65/149 (43.62%), Postives = 91/149 (61.07%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 575
            MI C+A+IG  N PL++RT+    GEE ED  L  H I H SLDV+ E+  G    +G      DM+LG L PI++YRVYGY+T+T +K + VL+D   +RE EL+  F+ VH  YVN + NPF+PL + + S  F   V   +  +N+
Sbjct:    1 MIACVAVIGAANSPLYIRTF----GEEGED--LGFHYIAHVSLDVIEEKLRG----AGITSSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPLGERLTSQTFDKRVSNLVVQHNT 138
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: K3WRF7_GLOUD (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF7_GLOUD)

HSP 1 Score: 115 bits (288), Expect = 4.360e-27
Identity = 62/149 (41.61%), Postives = 94/149 (63.09%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 575
            MI C+A+IG  N PL++RT+     +EEED  L  H I H SLD++ E K+   G   A D   DM+LG L PI++YRVYGY+T+T +K +A+++D + +RE EL+  F+ +H  YVN + NPF+P+ + + S  F   V   +  +N+
Sbjct:    1 MISCVAVIGAANSPLYVRTF-----DEEED--LGFHYIAHVSLDII-EEKLRSAGIMAAKD---DMYLGFLGPIEDYRVYGYVTNTSIKFVAIMQD-SPVRESELRSFFAEMHKMYVNAMSNPFAPIGERITSQNFEKKVYNLVLQHNT 137
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A7S2WDT6_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDT6_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.050e-26
Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 3 
Query:  132 IVCIAIIGRQNEPLFLRTYTDAEGE-------EEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRE--PELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQIND 566
            I C++++GR NEPLF+R Y   E          E+DA LR H ++H+SLDVV E+    +  S  A   T MFLG+LCP+DE+ +YGY+T+T  KL+  LED         ++  +F  +H+  +    NPF+PL K V S  F+  +D+ + +
Sbjct:   15 IACVSVVGRTNEPLFMRVYASEEAPFDALNPGSEQDA-LRFHYMIHASLDVVDEKHRPPRTESSPAPTKTSMFLGYLCPVDEFHLYGYVTNTHNKLIVALEDQAGTGGGIADMTGLFKRIHDLLIKQALNPFAPLGKVVASTNFQNGIDKLVQE 167
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BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: W4GM96_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GM96_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.920e-26
Identity = 60/144 (41.67%), Postives = 89/144 (61.81%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQI 560
            MI C+AI+G  N PLF+R Y        ED +L  H + H +LD+V ER    K          DM+LG L P++++RVYGY+T+T +KLLA+++D   ++E +++  FS +HN YVN + NPF+ L + + SAKF    DRQ+
Sbjct:    1 MIACVAIVGANNNPLFVRAYA-------EDDDLSFHYVAHIALDIVEERVKQSKD---------DMYLGFLGPVEDFRVYGYVTNTLVKLLAIVQDT-PMKESDMRAFFSVMHNLYVNAMSNPFAVLGERIASAKF----DRQV 123
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BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A7S3U8L7_9SPIT (Trafficking protein particle complex subunit 2-like protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U8L7_9SPIT)

HSP 1 Score: 110 bits (276), Expect = 2.730e-25
Identity = 57/145 (39.31%), Postives = 91/145 (62.76%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDS-AKFRLSVDRQI 560
            MIV +A++GR+N PL++R +   E   +  A LR H IVH+++D + E+    K + G      DM+LG L PI+EYRVYGYMT++R+KL+ VL+D  ++++ E++ +F  +H  YV+ + NPF  L   ++  A F   V R +
Sbjct:    1 MIVAVAVLGRENNPLYMRAF--GELSMDSTATLRFHFIVHAAIDYIEEKLGQAKTSPGNTAPKLDMYLGFLYPIEEYRVYGYMTNSRVKLITVLDD-EEVKDSEMRALFRRLHTLYVDTISNPFHKLDSELNGCASFEKQVGRVV 142
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Match: A0A6G0XKF3_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKF3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.930e-25
Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 3 
Query:  129 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 575
            MI C+AI+G  N PLF+R++       EE+  L  H I H +LD+V ER               DM+LG L P++++RVYGY+T+T +K L V+ D   ++E EL+  F+ VH  YVN + NPF+ L + + S KF+  V   +  +NS
Sbjct:    1 MIACVAIVGANNNPLFVRSF-------EEEDELSFHYIAHVALDIVEER---------VKQSRDDMYLGFLGPVEDFRVYGYITNTAVKFLTVVPDA-PVKESELRAFFAEVHKLYVNAMSNPFAQLGERITSNKFQTKVHGLVQQFNS 132
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU3_ECTSI5.280e-98100.00Trafficking protein particle complex subunit 2-lik... [more]
A0A836CHF0_9STRA2.770e-4652.29Trafficking protein particle complex subunit 2-lik... [more]
W7T3S0_9STRA5.410e-3346.71Trafficking protein particle complex subunit 2-lik... [more]
A0A8K1FMJ4_PYTOL6.020e-3045.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0N1W2_PHYIT8.510e-2843.62Trafficking protein particle complex subunit 2-lik... [more]
K3WRF7_GLOUD4.360e-2741.61Trafficking protein particle complex subunit 2-lik... [more]
A0A7S2WDT6_9STRA1.050e-2638.31Trafficking protein particle complex subunit 2-lik... [more]
W4GM96_9STRA3.920e-2641.67Trafficking protein particle complex subunit 2-lik... [more]
A0A7S3U8L7_9SPIT2.730e-2539.31Trafficking protein particle complex subunit 2-lik... [more]
A0A6G0XKF3_9STRA3.930e-2538.93Trafficking protein particle complex subunit 2-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1423contigE-siliculosus-1a_F_contig1423:7302..10237 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size450
Model size1397
Exons4
Ec32 orthologEc-21_005600.1
Ec32 ortholog descriptionSedlin
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko01009,ko02000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC3.1.3.48
EggNOG OGsKOG3444@1,KOG3444@2759
EggNOG free text desc.ER to Golgi vesicle-mediated transport
GOsGO:0003008,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007600,GO:0008150,GO:0009987,GO:0012505,GO:0016043,GO:0016050,GO:0016192,GO:0017016,GO:0017112,GO:0017137,GO:0019233,GO:0019899,GO:0022607,GO:0030008,GO:0031267,GO:0032501,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0050877,GO:0051020,GO:0051179,GO:0051234,GO:0051259,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0065003,GO:0065007,GO:0065009,GO:0071840,GO:0090114,GO:0098772,GO:0099023
KEGG Pathwayko04146,map04146
KEGG TC2.A.29.20.1
KEGG koko:K13354,ko:K17622,ko:K20301
Preferred nameTRAPPC2L
Seed eggNOG ortholog2880.D8LEU3
Seed ortholog evalue1.2e-79
Seed ortholog score302.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1423.2494.1prot_E-siliculosus-1a_F_contig1423.2494.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1423 7430..9418 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927937.8661208-UTR-E-siliculosus-1a_F_contig1423:7301..74291622927937.8661208-UTR-E-siliculosus-1a_F_contig1423:7301..7429Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1423 7302..7429 +
1696318745.014265-UTR-E-siliculosus-1a_F_contig1423:7301..74291696318745.014265-UTR-E-siliculosus-1a_F_contig1423:7301..7429Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1423 7302..7429 +
1622927937.9385643-UTR-E-siliculosus-1a_F_contig1423:9418..102371622927937.9385643-UTR-E-siliculosus-1a_F_contig1423:9418..10237Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1423 9419..10237 +
1696318745.071019-UTR-E-siliculosus-1a_F_contig1423:9418..102371696318745.071019-UTR-E-siliculosus-1a_F_contig1423:9418..10237Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1423 9419..10237 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927937.8795874-CDS-E-siliculosus-1a_F_contig1423:7429..74621622927937.8795874-CDS-E-siliculosus-1a_F_contig1423:7429..7462Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1423 7430..7462 +
1696318745.0305314-CDS-E-siliculosus-1a_F_contig1423:7429..74621696318745.0305314-CDS-E-siliculosus-1a_F_contig1423:7429..7462Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1423 7430..7462 +
1622927937.8925388-CDS-E-siliculosus-1a_F_contig1423:7845..79631622927937.8925388-CDS-E-siliculosus-1a_F_contig1423:7845..7963Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1423 7846..7963 +
1696318745.0460343-CDS-E-siliculosus-1a_F_contig1423:7845..79631696318745.0460343-CDS-E-siliculosus-1a_F_contig1423:7845..7963Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1423 7846..7963 +
1622927937.9073234-CDS-E-siliculosus-1a_F_contig1423:8631..88011622927937.9073234-CDS-E-siliculosus-1a_F_contig1423:8631..8801Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1423 8632..8801 +
1696318745.0563757-CDS-E-siliculosus-1a_F_contig1423:8631..88011696318745.0563757-CDS-E-siliculosus-1a_F_contig1423:8631..8801Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1423 8632..8801 +
1622927937.9195518-CDS-E-siliculosus-1a_F_contig1423:9289..94181622927937.9195518-CDS-E-siliculosus-1a_F_contig1423:9289..9418Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1423 9290..9418 +
1696318745.063741-CDS-E-siliculosus-1a_F_contig1423:9289..94181696318745.063741-CDS-E-siliculosus-1a_F_contig1423:9289..9418Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1423 9290..9418 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1423.2494.1

>prot_E-siliculosus-1a_F_contig1423.2494.1 ID=prot_E-siliculosus-1a_F_contig1423.2494.1|Name=mRNA_E-siliculosus-1a_F_contig1423.2494.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=150bp
MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERK
VGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDI
REPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS*
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mRNA from alignment at E-siliculosus-1a_F_contig1423:7302..10237+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1423.2494.1 ID=mRNA_E-siliculosus-1a_F_contig1423.2494.1|Name=mRNA_E-siliculosus-1a_F_contig1423.2494.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2936bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1423:7302..10237+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGTCTACCTGCTGTGTGCTTTGTTCACTGCCCCGACCTGGCCAGCTCCAT
CTCTCGCACCAGATCTACAGCGCCATACACCGTACCTCCACCCTTCTGCC
TGTTGGTCCGAGTCGCAATACATTAGCGATGATCGTGTGCATCGCAATAA
TCGGTCGACAGGTGAGAGGGCAGTACTTCCTTACAGGTCCGCAACTCCAT
CTTCCCGTAGAGCAACCTGCAGCGGGCAACAAGATGTGGTGATGCGGTAC
GGGCGCGAATGTGCCTACATAATCCGCCTACCATGCGAGCTTCCTGTTGC
GAGTTGTCGAGAAGTGAAAACTTTGTCGAAACAGGGTACCACTGTACATG
AAGCAAGTGTATTACCATTACGCAGGACATACCTCGCAGAGAGCGGCACA
AGTCTGGGCTGGTTCGAACGGCACTCTTGGACGCATGTGCTCTCTCCATC
TCTTCCTCTTGCTTAGGCAGATCCTTTCCTCTTGCCGATCCTTACACCGT
TTCCACGCCTGCTTGCTCTTTGCTTATTTTCACGGCTTGTTCAGAACGAG
CCGCTGTTTCTGCGAACGTACACCGACGCGGAGGGCGAGGAGGAAGAGGA
CGCCAACCTCCGCCTGCACAACATCGTACACAGCTCGCTCGACGTGGTCG
GCGAGCGAAAAGGTATGCTCGCAACTTGTTTTCCGGCCTGTAGGTTTCGC
CTACAGTGATATGATGCAGCAGCAGTATTTTTAGGTGCTGTTGTTGATTG
TTCAACATCTCATGGGTGGGGAGGTCAGAACCCAGCTGAATCGATCCACC
GGAGACTACCACAAGTAGGCGTGTGAGAGATTGCAGGAAACAAGGACTTT
TGGCGGCGGTAGAGGCTTTGGTGTCTTATGCATCATGCTCGCGTTCTGCA
ATCGTTATGCGATTTGCGGGTCGTCGGTCGCTTCGCCCACATCTGTACTA
CCTCTGTTGCCAGCGCAGTAGGCCCGCACTATAAGAAGTATTGTCGTTAA
ACCACAGCACTTTGTTGCCGGGTACACGCGGACCCAGCCGCTGAGAAGCT
GTGCCGTTCGCTGATTGAGAAGTGTCGCAATGTTCACAGAGGGTTGAAGC
TTCCAAAGCGCACACCAACTAAAATCAACCCTTCTCGCACTGCACTGTTT
TGCAGAGTATGAAAGTACTGGTTGGAGGTCAAATTGTTTCGATGGTGAAG
ACAACTGGTACCCACTACCGTAGTATTTCAAAACCCCTAGTATTTTGACC
ACTAGCAATCTTACACCTTATGCATCCACCTGTGGTGACGCACCGTGCGT
CTTTGTCACCTCGACCGGTGGTACTGACAGTAGGCCGAAAAGGCGCTTCC
GGCGCGGCGGATGTGTCAACTGACATGTTTCTGGGACACCTCTGCCCGAT
CGACGAGTACCGAGTTTACGGCTACATGACGAGCACTCGCCTCAAGCTGT
TGGCGGTGTTGGAGGACGTGAACGATATCCGAGAACCAGAACTAAAGAGG
GTGAGCGAGGAATCAAGGGACACAAGCCAACCCGTGTCCATGTTTTGACC
CCATCGACTAGAGGAACCATTGAGGGCGTGTGCACATGTGAGGGTGACGG
TGCGGGCCAATTCTACATTGTCACGGTTGTGGGCTGGCTTTGTTAGTGCC
GGAAGACAAAAGATACCCCGAGAAGCAACCGATTGCACCTACCACGCACC
TTTGGCGAATGAAGCAAGGTCGCGTGTGTGTGTCGTACACGAGAGAGGGT
TGATTGAGTAGCTCCCACCTCGAAGTGTGTTGGAACTCTGTGCAGCACGC
AGCTCGGTTGGCACCGGGCAGCACCGCGGCAGCAACGTATGCCGCTTGTT
TACGTGTTTTCTTGGTACGCCCATGGCTCGCAGACAGTTCTCTGCAGCAG
TGTGTCCCTATGCAATCGACCTTACTGTTTTTGGCCCCCCGTCGCCGCCG
CTGCCGCCGGTGATATTGTCTGCTGTACGCCTGACCAGGTATTTTCGACC
GTGCACAACTTTTACGTGAACTACCTCCGAAATCCTTTCTCCCCCCTGGC
GAAACCCGTGGATTCGGCGAAGTTCCGTCTATCGGTAGACCGACAAATCA
ACGACTACAACTCGTGACGAGTGGTCGTGTTGGCGTCTTTCTCGTGTCGT
GGTGCTGTTTACAAGCTGAGAAGATGGGGCGGTGGTGGCTCACTGCCGAG
CTTCATCGTGTCTTCCGTCACCAAGTTGCAGCGAATGGACAACCCAGGGC
CTCGAGGCTGTCCTGTTGTATGATAGTACCTTCGGCTTTCCCTAAGGGCT
GCACCCTCTAGTAATCAACGCTTCCGTCGGCCACTTCTGGGCTTGAAAGG
AGAAATACGTGCGTTTGCGTTTCCCCTGCCTGGAAATGTGGACCGTGGCT
TGTCAGGCGTGCAATCATCGTCCGGCATTCCGTCCTGAACGCAAACGACC
GGCGGGATTTCAAGTCCCAGCTTTGTGCGTTTTGAATGCTGCCTCGGGCA
CGCCTTATCGCCCGTACTTCAGGCGTGTACGACGTGTTGATTGCTACTGT
GCATCGTCATCGGCGTTAAGCCAACAGGTGACACCAGCAACCCAGAAGCC
GATTTGGGCCGACGATAAGCAAAGAAGCGATTGAGAAGGCACCGTACGGA
GGGAGATTGGTGTGGTATCAGTACGTCAGTGCTTCTCCGCAAACACACTG
TGGAACAGGCTACATTTTGGAGCGGACGAAACCTTCGTTTTGATGTTGTC
TGACACGTCACAGAATTTCTTCAGTAAAGTAGACAGGACCTTGCGCAGTA
CGTGCATCGCGATTCGTTTGGCCACGTACGATAGGTGGGAATCGTTTCAG
AGGCTGGTCGAGTTGCCAAGTACTTTCGATTCAATAACGCGTGCTGCCCA
AAGCTCATGCATGATCCTGTACATGTCCAAGGCCCA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1423:7302..10237+

>mRNA_E-siliculosus-1a_F_contig1423.2494.1 ID=mRNA_E-siliculosus-1a_F_contig1423.2494.1|Name=mRNA_E-siliculosus-1a_F_contig1423.2494.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=900bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1423:7302..10237+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATCGTGTGCATCGCAATAATCGGTCGACAGATGATCGTGTGCATCGC
AATAATCGGTCGACAGAACGAGCCGCTGTTTCTGCGAACGTACACCGACG
CGGAGGGCGAGGAGGAAGAGGACGCCAACCTCCGCCTGCACAACATCGTA
CACAGCTCGCTCGACGTGGTCGGCGAGCGAAAAGAACGAGCCGCTGTTTC
TGCGAACGTACACCGACGCGGAGGGCGAGGAGGAAGAGGACGCCAACCTC
CGCCTGCACAACATCGTACACAGCTCGCTCGACGTGGTCGGCGAGCGAAA
AGTAGGCCGAAAAGGCGCTTCCGGCGCGGCGGATGTGTCAACTGACATGT
TTCTGGGACACCTCTGCCCGATCGACGAGTACCGAGTTTACGGCTACATG
ACGAGCACTCGCCTCAAGCTGTTGGCGGTGTTGGAGGACGTGAACGATAT
CCGAGAACCAGAACTAAAGAGGTAGGCCGAAAAGGCGCTTCCGGCGCGGC
GGATGTGTCAACTGACATGTTTCTGGGACACCTCTGCCCGATCGACGAGT
ACCGAGTTTACGGCTACATGACGAGCACTCGCCTCAAGCTGTTGGCGGTG
TTGGAGGACGTGAACGATATCCGAGAACCAGAACTAAAGAGGGTATTTTC
GACCGTGCACAACTTTTACGTGAACTACCTCCGAAATCCTTTCTCCCCCC
TGGCGAAACCCGTGGATTCGGCGAAGTTCCGTCTATCGGTAGACCGACAA
ATCAACGACTACAACTCGTGAGTATTTTCGACCGTGCACAACTTTTACGT
GAACTACCTCCGAAATCCTTTCTCCCCCCTGGCGAAACCCGTGGATTCGG
CGAAGTTCCGTCTATCGGTAGACCGACAAATCAACGACTACAACTCGTGA
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