prot_E-siliculosus-1a_F_contig142.2477.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig142.2477.1
Unique Nameprot_E-siliculosus-1a_F_contig142.2477.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length184
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig142.2477.1 vs. uniprot
Match: D7G0A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A9_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 3.200e-67
Identity = 124/134 (92.54%), Postives = 125/134 (93.28%), Query Frame = 0 
Query:   51 LEKSVVPSRVSRNERGGGCRPPGAEAEQAMRSRGQTTQRACQPEANDVARRRRRRALPGGGEKRTALEARDQRRFRPDVAAGRSDTASATARRRPAAAIARHSLRNAFLVLFAAMLAAPRIDNPSSSTARLRGG 184
            LEKSVVPS VSRNERG GCRPPGAEAEQAMRSRGQT QRACQ EA DVARRRRRRALP GGEKRTALEARDQRRFRPDVAAGRSDTASATARRR A AIARHSLRNAFLVLFAAMLA PRI+NPSSSTARLRGG
Sbjct:   60 LEKSVVPSTVSRNERGEGCRPPGAEAEQAMRSRGQTNQRACQQEAKDVARRRRRRALPTGGEKRTALEARDQRRFRPDVAAGRSDTASATARRRSAPAIARHSLRNAFLVLFAAMLATPRINNPSSSTARLRGG 193
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig142.2477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0A9_ECTSI3.200e-6792.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig142contigE-siliculosus-1a_F_contig142:1835..4527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig142.2477.1mRNA_E-siliculosus-1a_F_contig142.2477.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig142 1835..4527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig142.2477.1 ID=prot_E-siliculosus-1a_F_contig142.2477.1|Name=mRNA_E-siliculosus-1a_F_contig142.2477.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=184bp
SHSLDKKIEPRNNKQQAVSSIRKQPAAGGSRSHTEDATREGVRQVEEQML
LEKSVVPSRVSRNERGGGCRPPGAEAEQAMRSRGQTTQRACQPEANDVAR
RRRRRALPGGGEKRTALEARDQRRFRPDVAAGRSDTASATARRRPAAAIA
RHSLRNAFLVLFAAMLAAPRIDNPSSSTARLRGG
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