prot_E-siliculosus-1a_F_contig1417.2463.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1417.2463.1
Unique Nameprot_E-siliculosus-1a_F_contig1417.2463.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length142
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Match: D7FH71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH71_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 1.640e-83
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
Query:    1 QAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRMAKTSGVCVGSDMKATLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGAREASGVAGSSGTPCCNSATQA 141
            QAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANE+IRYGRDRMAK SGVCVGSD+KAT AFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGA+EASGVAGSSGTPCCNSATQA
Sbjct:   66 QAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEMIRYGRDRMAKASGVCVGSDVKATFAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGAKEASGVAGSSGTPCCNSATQA 206          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Match: D7FWU3_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWU3_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 7.380e-65
Identity = 115/142 (80.99%), Postives = 125/142 (88.03%), Query Frame = 0
Query:    1 QAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRMAKTSGVCVGSDMKATLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKD-GAREASGVAGSSGTPCCNSATQA 141
            Q+ATSASV CILFLFEGAGVDTKTKYAFAALGAF MGFANE+IRYGRDRMAKTS V + SD+K T AFAVQ++LAYMLMLLVMLYEYVILIMIISGLA GHL+TLR SAGRRRAAL+D GA+    V GSSGTPCCN+ T A
Sbjct:   39 QSATSASVNCILFLFEGAGVDTKTKYAFAALGAFFMGFANEMIRYGRDRMAKTSDVSLASDLKMTAAFAVQIYLAYMLMLLVMLYEYVILIMIISGLATGHLLTLRWSAGRRRAALRDAGAKTPPEVMGSSGTPCCNTDTVA 180          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Match: A0A819B819_9BILA (Copper transport protein n=7 Tax=Adineta steineri TaxID=433720 RepID=A0A819B819_9BILA)

HSP 1 Score: 70.5 bits (171), Expect = 1.510e-12
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 0
Query:   10 CILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRMAK----TSGVCVGSDMKATLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLV 103
            CILFLF+G  VDT  KYAF  +G  CMG  N  + Y R  +      TS + +   +  +L +A+Q+ LAY +MLLVM YE  I I +I GL  GH +
Sbjct:   26 CILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYIRHCLVNNSKHTSSLLI-HQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLIGGLVLGHFI 122          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Match: A0A815NM06_9BILA (Copper transport protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815NM06_9BILA)

HSP 1 Score: 70.1 bits (170), Expect = 2.570e-11
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 0
Query:   10 CILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRMAK----TSGVCVGSDMKATLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLV 103
            CILFLF+G  VDT  KYAF  +G  CMG  N  + Y R  +      TS + +   +  +L +A+Q+ LAY +MLLVM YE  I I +I GL  GH +
Sbjct:  302 CILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYVRHCLVNNSKHTSSLFI-HQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLICGLVLGHFI 398          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Match: W7TTP6_9STRA (Copper transport protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTP6_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.050e-10
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0
Query:   10 CILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRMA------------KTSGVCVGSDMKA--------TLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGH 101
            CIL+LF+GA V+T  KYA A +G F + F+ E +R+ R  M             K   V  G  ++A         L F V MF+AY++MLLVMLYE+ I I ++ GLAAG+
Sbjct:   33 CILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGY 144          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Match: W7U9L9_9STRA (Copper transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9L9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.140e-10
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0
Query:   10 CILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRMA------------KTSGVCVGSDMKA--------TLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGH 101
            CIL+LF+GA V+T  KYA A +G F + F+ E +R+ R  M             K   V  G  ++A         L F V MF+AY++MLLVMLYE+ I I ++ GLAAG+
Sbjct:   91 CILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGY 202          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Match: A0A835YUT5_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.440e-10
Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = 0
Query:   10 CILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRMAKTSGV---CVGSDMKA-------TLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHL 102
            CI++LFEGA +DT  KY  A +G F + FANE IR+ R R          C  SDM A        L +  QM +AY LML+VM YE  +   I+ GL AG+L
Sbjct:   44 CIIWLFEGAVLDTAGKYTGAVIGTFLLAFANEGIRWLRSRAMSGKAPFTRCHLSDMPAFARDVVLALMYGFQMLIAYWLMLIVMTYEVFLFTAILLGLTAGYL 146          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Match: A0A0L0D9P1_THETB (Copper transport protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9P1_THETB)

HSP 1 Score: 59.7 bits (143), Expect = 3.600e-8
Identity = 47/127 (37.01%), Postives = 65/127 (51.18%), Query Frame = 0
Query:   10 CILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRMAKTSG-----------------VC------VGSDMKATLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRR 113
            CIL+LF+GA VDT  KYA A +G+F +  A   ++  R+R++  +                  +C      +G D+     FA+QM LAY +MLLVMLYE  I   II G     L+ +RL   RRR
Sbjct:   29 CILWLFQGAVVDTPGKYALACIGSFSLVLAMVFLQLVRERVSLWASRRSSSXXXXXXXXXXPSLCSGGLPMLGLDLAVAALFALQMVLAYWIMLLVMLYEAWIFTSIIIGFFVSQLLAIRL---RRR 152          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FH71_ECTSI1.640e-8396.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWU3_ECTSI7.380e-6580.99Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
A0A819B819_9BILA1.510e-1243.88Copper transport protein n=7 Tax=Adineta steineri ... [more]
A0A815NM06_9BILA2.570e-1143.88Copper transport protein n=1 Tax=Adineta steineri ... [more]
W7TTP6_9STRA1.050e-1041.07Copper transport protein n=1 Tax=Nannochloropsis g... [more]
W7U9L9_9STRA2.140e-1041.07Copper transport protein n=3 Tax=Monodopsidaceae T... [more]
A0A835YUT5_9STRA2.440e-1043.69Copper transport protein n=1 Tax=Tribonema minus T... [more]
A0A0L0D9P1_THETB3.600e-837.01Copper transport protein n=1 Tax=Thecamonas trahen... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 64..103
e-value: 8.1E-6
score: 26.5
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 9..108
NoneNo IPR availablePANTHERPTHR12483:SF27COPPER TRANSPORTER 1A, ISOFORM C-RELATEDcoord: 9..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availableTMHMMTMhelixcoord: 64..83
NoneNo IPR availableTMHMMTMhelixcoord: 26..43
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1417contigE-siliculosus-1a_F_contig1417:84..2108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1417.2463.1mRNA_E-siliculosus-1a_F_contig1417.2463.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1417 84..2108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1417.2463.1 ID=prot_E-siliculosus-1a_F_contig1417.2463.1|Name=mRNA_E-siliculosus-1a_F_contig1417.2463.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=142bp
QAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEIIRYGRDRM
AKTSGVCVGSDMKATLAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAG
HLVTLRLSAGRRRAALKDGAREASGVAGSSGTPCCNSATQA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter