prot_E-siliculosus-1a_F_contig1413.2448.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1413.2448.1
Unique Nameprot_E-siliculosus-1a_F_contig1413.2448.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length343
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1413.2448.1 vs. uniprot
Match: A0A6H5KPX0_9PHAE (Mon2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX0_9PHAE)

HSP 1 Score: 555 bits (1431), Expect = 5.050e-184
Identity = 313/342 (91.52%), Postives = 320/342 (93.57%), Query Frame = 0
Query:    1 ETETTPQFSAARPALYAMAWAAMLEASGFEADSGGDVAAAFVQGLAAVYKAGVEEGAELCPGQEGEEERMRQLFETLDGLFAPRVAPASASGGGAPQATDPRRAVYMPKVTPGQRAILEFLQDDLRTGWRLAVRLLAKYSVVVDGSEEAXXXXXXXXXXXXGPGGVSVECVREAAAALSSVMSNGRVPKRDSAVALEGLLFDVSAPCVRRLEGLRKHKSGPDSAAAAAGAPPTRPSAAAMPGAAVASATDDAPVSSWPSLDGYSEVMQLVLALLTDGLPSVADPASFQQDQRDQERDKRLVSCLKVAIKGIGAVAECRRLKMAFLKKGLSLGSPQAAGSETT 342
            ETETTPQFSAARPALYAMAWAAMLEAS FE DS GDVAAAFVQGLAAVYKAGVEEGAELCPGQEGE+ERMRQLFETLDGLF PRVAPA+ SGG APQATDPRRAVYMPKVTPGQRAILEFLQDDLRTGWRLAVRLLAKYSVVVDGSEEA   XXXXXXX  GPGGVSVECVREAAAALSSVMSNGRVPKRDSAVALEGLLFDVSAPC+RRLEGLRKHKSGPDSAAAAA APPT+ SAAAMPGAAVASATD  PVSSWPSLD +SEVM+LVLALL DGLPSVAD ASFQQ +RDQERDKRLVSCLKVAIKGIGAVAECRRLKM FLKK LSLGS QAAGSETT
Sbjct:  685 ETETTPQFSAARPALYAMAWAAMLEASRFETDSDGDVAAAFVQGLAAVYKAGVEEGAELCPGQEGEDERMRQLFETLDGLFPPRVAPAAGSGGCAPQATDPRRAVYMPKVTPGQRAILEFLQDDLRTGWRLAVRLLAKYSVVVDGSEEASPAXXXXXXX--GPGGVSVECVREAAAALSSVMSNGRVPKRDSAVALEGLLFDVSAPCIRRLEGLRKHKSGPDSAAAAAEAPPTQLSAAAMPGAAVASATD-LPVSSWPSLDCFSEVMRLVLALLNDGLPSVADRASFQQAERDQERDKRLVSCLKVAIKGIGAVAECRRLKMGFLKKDLSLGSRQAAGSETT 1023          
BLAST of mRNA_E-siliculosus-1a_F_contig1413.2448.1 vs. uniprot
Match: D8LQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH8_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 2.470e-153
Identity = 276/301 (91.69%), Postives = 280/301 (93.02%), Query Frame = 0
Query:   42 VQGLAAVYKAGVEEGAELCPGQEGEEERMRQLFETLDGLFAPRVAPASASGGGAPQATDPRRAVYMPKVTPGQRAILEFLQDDLRTGWRLAVRLLAKYSVVVDGSEEAXXXXXXXXXXXX-GPGGVSVECVREAAAALSSVMSNGRVPKRDSAVALEGLLFDVSAPCVRRLEGLRKHKSGPDSAAAAAGAPPTRPSAAAMPGAAVASATDDAPVSSWPSLDGYSEVMQLVLALLTDGLPSVADPASFQQDQRDQERDKRLVSCLKVAIKGIGAVAECRRLKMAFLKKGLSLGSPQAAGSET 341
            VQGLAAVYKAGVEEGAELCPGQEGEEERMRQLFETLDGLFAPRVAPAS  GGGAPQATDPRRAVYMPKVTPGQRAILEFLQ+DLRTGWRLAVRLLAKYSVVVDGSEE XXXXXXXXXXXX GPGGVSVECVRE AAALSSVMSNGRVPKRDSAVALEGLLFDVSAPCVRRLEGLRKH+S PDSAAA       +    AMPGAAVASATDDAPVSSWPSLD YSEVMQLVLALLTDGLPSVADPASFQQ +RDQERDK LVSCLKVAIKGIGAVAECRRLKMAFLKK LSLGSPQAAGSET
Sbjct: 1564 VQGLAAVYKAGVEEGAELCPGQEGEEERMRQLFETLDGLFAPRVAPASGGGGGAPQATDPRRAVYMPKVTPGQRAILEFLQEDLRTGWRLAVRLLAKYSVVVDGSEEXXXXXXXXXXXXXXGPGGVSVECVREVAAALSSVMSNGRVPKRDSAVALEGLLFDVSAPCVRRLEGLRKHRSRPDSAAAXXXXXXXQRXXXAMPGAAVASATDDAPVSSWPSLDSYSEVMQLVLALLTDGLPSVADPASFQQGKRDQERDKSLVSCLKVAIKGIGAVAECRRLKMAFLKKDLSLGSPQAAGSET 1864          
BLAST of mRNA_E-siliculosus-1a_F_contig1413.2448.1 vs. uniprot
Match: A0A835YQS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS4_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.090e-18
Identity = 81/227 (35.68%), Postives = 106/227 (46.70%), Query Frame = 0
Query:    8 FSAARPALYAMAWAAMLEASGFEADSGGDVAAAFVQGLAAVYKAGVEEGAELCPGQEGEEERMR--QLFETLDGLFAPRVAPASASGGGAPQATDPRRA-VYMPKVTPGQRAILEFLQDDLRTGWRLAVRLLAKYSVVVDGSEEAXXXXXXXXXXXXGPGGVSVECVREAAAALSSVMSNGRVPKRDSAVALEGLLFDVSAPCVRRLEGLRKHKSGPDSAAAAAGAP 231
            F   R  L+A AW AM +A+ FE+D  G+VAAAF +    V+++G         G   + +     +L + LD L  PR A     G G       RR       +T  QR ILEF++D++   W  AVRLLA Y+                     GP GVS  C REAA  L S+M  GRVP    A AL GLL  +S PC    E L + + G  ++  AAG P
Sbjct: 1383 FEEQREGLWAQAWRAMRDATSFESDEFGEVAAAFARAYTQVHRSGAAAEFAAANGSSAQHDGSAAVELLDALDSLMVPRRAQPLRDGDGPTAGGQLRRTGTGGHTLTTAQRLILEFIKDEVCGCWDRAVRLLANYAF--------------------GPAGVSEACAREAAQVLISLMG-GRVPAEARAAALPGLLTHMSRPC----EALLRPEMGRAASVRAAGQP 1584          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1413.2448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KPX0_9PHAE5.050e-18491.52Mon2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LQH8_ECTSI2.470e-15391.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQS4_9STRA1.090e-1835.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1413contigE-siliculosus-1a_F_contig1413:30884..32285 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1413.2448.1mRNA_E-siliculosus-1a_F_contig1413.2448.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1413 30882..32285 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1413.2448.1 ID=prot_E-siliculosus-1a_F_contig1413.2448.1|Name=mRNA_E-siliculosus-1a_F_contig1413.2448.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=343bp
ETETTPQFSAARPALYAMAWAAMLEASGFEADSGGDVAAAFVQGLAAVYK
AGVEEGAELCPGQEGEEERMRQLFETLDGLFAPRVAPASASGGGAPQATD
PRRAVYMPKVTPGQRAILEFLQDDLRTGWRLAVRLLAKYSVVVDGSEEAS
SAAAATAAAAAGPGGVSVECVREAAAALSSVMSNGRVPKRDSAVALEGLL
FDVSAPCVRRLEGLRKHKSGPDSAAAAAGAPPTRPSAAAMPGAAVASATD
DAPVSSWPSLDGYSEVMQLVLALLTDGLPSVADPASFQQDQRDQERDKRL
VSCLKVAIKGIGAVAECRRLKMAFLKKGLSLGSPQAAGSETTP
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