prot_E-siliculosus-1a_F_contig1413.2447.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1413.2447.1
Unique Nameprot_E-siliculosus-1a_F_contig1413.2447.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length296
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1413.2447.1 vs. uniprot
Match: A0A6H5KPX0_9PHAE (Mon2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX0_9PHAE)

HSP 1 Score: 437 bits (1123), Expect = 1.040e-139
Identity = 241/289 (83.39%), Postives = 251/289 (86.85%), Query Frame = 0 
Query:    2 RGFPLLLREALVLVTRAVRSELVPLVHKGSEDARDAARALIDTLGAIALVSTVDTPQPXXXXXXREAXXXXXXXXXXXXXXXSS-VAAADNDCAVENSASSDAFGLAVHELAAMCSEGASAGGWAQLGLPLRRRACWHLLRCVWSTTYRFRKLEDEVDAADAPARTPPEDMARLRYSLALRADRCTCVLATVGKVRLPPALLTPRFKKLVATKQGQENLPLLDTQARATATASPALTGAGGVEGDGEQAGPEDAVWASMAEEGEENAAVDTSSSSGVDATSRSEAVEGG 289
            RGFPLLLREAL+LVTR VRSELVPLVH+GSEDARDAARALIDTLGAIALVS VDTPQP      REA                S  AAAD+D AVENSASSDAFGLAVHELAAMCSEG+SAGGWAQLGLPLRRRACWHLLRCVWSTT+RFRKLEDEVDAADAPARTPPEDMARLR SLALRADRC  VLATVGKVRLPP LLTPRFKKLVATKQGQ+NLPL++TQARA  T SPAL GAGGV+GDGEQAGPEDAVWASMAEEGE+NAAVD SS  GVDATSRSEAVEGG
Sbjct: 1036 RGFPLLLREALMLVTRTVRSELVPLVHEGSEDARDAARALIDTLGAIALVSAVDTPQPPTPTPSREAAHSTSGGSSSANSSGDSYAAAADSDRAVENSASSDAFGLAVHELAAMCSEGSSAGGWAQLGLPLRRRACWHLLRCVWSTTHRFRKLEDEVDAADAPARTPPEDMARLRSSLALRADRCASVLATVGKVRLPPTLLTPRFKKLVATKQGQDNLPLVNTQARAATTGSPALAGAGGVDGDGEQAGPEDAVWASMAEEGEQNAAVD-SSILGVDATSRSEAVEGG 1323
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BLAST of mRNA_E-siliculosus-1a_F_contig1413.2447.1 vs. uniprot
Match: D8LQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH8_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 2.950e-120
Identity = 215/271 (79.34%), Postives = 219/271 (80.81%), Query Frame = 0 
Query:    1 ARGFPLLLREALVLVTRAVRSELVPLVHKGSEDARDAARALIDTLGAIALVSTVDTPQPXXXXXXREAXXXXXXXXXXXXXXXSSVAAADNDCAVENSASSDAFGLAVHELAAMCSEGASAGGWAQLGLPLRRRACWHLLRCVWSTTYRFRKLEDEVDAADAPARTPPEDMARLRYSLALRADRCTCVLATVGKVRLPPALLTPRFKKLVATKQGQENLPLLDTQAR-ATATASPALTGAGGVEGDGEQAGPEDAVWASMAEEGEENAAVD 270
            ARGFPLLLREAL+LVTRAVRSELVPLVHKGSEDARDAARALIDTL                                            D DCAVENSASSDAFGLAVHELAAMCSEGASAGGWAQLGLPLRRRACWHLLRC WSTTYRFRKLEDEVDAADAPARTPPEDMA+LR SLALRADRC CVLATVGKVRLPPALLTPRFKKLVATKQGQENLPLL+T+AR AT T SPAL GAGGVEGDGEQAGPEDAVWASMAEEGEENAAVD
Sbjct: 1877 ARGFPLLLREALMLVTRAVRSELVPLVHKGSEDARDAARALIDTL--------------------------------------------DGDCAVENSASSDAFGLAVHELAAMCSEGASAGGWAQLGLPLRRRACWHLLRCAWSTTYRFRKLEDEVDAADAPARTPPEDMAQLRSSLALRADRCACVLATVGKVRLPPALLTPRFKKLVATKQGQENLPLLNTEARRATTTGSPALAGAGGVEGDGEQAGPEDAVWASMAEEGEENAAVD 2103
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1413.2447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPX0_9PHAE1.040e-13983.39Mon2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LQH8_ECTSI2.950e-12079.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1413contigE-siliculosus-1a_F_contig1413:27366..30853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1413.2447.1mRNA_E-siliculosus-1a_F_contig1413.2447.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1413 27364..30853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1413.2447.1 ID=prot_E-siliculosus-1a_F_contig1413.2447.1|Name=mRNA_E-siliculosus-1a_F_contig1413.2447.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=296bp
ARGFPLLLREALVLVTRAVRSELVPLVHKGSEDARDAARALIDTLGAIAL
VSTVDTPQPPPPTPSREAAHSSSGGSSANSSGDSSVAAADNDCAVENSAS
SDAFGLAVHELAAMCSEGASAGGWAQLGLPLRRRACWHLLRCVWSTTYRF
RKLEDEVDAADAPARTPPEDMARLRYSLALRADRCTCVLATVGKVRLPPA
LLTPRFKKLVATKQGQENLPLLDTQARATATASPALTGAGGVEGDGEQAG
PEDAVWASMAEEGEENAAVDTSSSSGVDATSRSEAVEGGDKVEGGS
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