prot_E-siliculosus-1a_F_contig141.2431.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig141.2431.1
Unique Nameprot_E-siliculosus-1a_F_contig141.2431.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1073
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2431.1 vs. uniprot
Match: D8LE76_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE76_ECTSI)

HSP 1 Score: 1021 bits (2640), Expect = 0.000e+0
Identity = 778/837 (92.95%), Postives = 791/837 (94.50%), Query Frame = 0 
Query:   45 KTHSILPVGRKQKGPRLVSLEVLRLDGNRLAEGPEMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARFLNVATEAYEDVVHVVPDFPDVAGDGLPLAKTRPHDMDTFHHVNLAMVHLQGARKVDIEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQXXXXXXXXXXKRLEESAMADVNEDKEEAGVEGESSIAPSKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPAEGSEQVEAFALTGDAAAAADSANSAGEIGDTLPTITEEELPASEAGLVVGNSSTFEGELDKTGDQGQAIDERSDGERGDGGRLEAEPTSENKDPSTTSPTQNEETLQESPWLEETGGLSSREKELREGGSLGSASAGTAPNTDGKRNRSNTVKDSPARAELSKQRADIALLVAQAKEGMTYVAQSVDMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR 881
            KTHSILPVGRKQKGPRLVSLEVLRLDGNRL E P+MVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAAR LNVA EAY+DVVHVVPDFPDVAG+G PLAKTRPHD DTFHHV+LAM HL+GARKV IEIDDMTGKTDGASG SVAGSLSLQSVDMTEDSSM T SIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQ          KRLEESAMADVNEDKEEAGVEG+SSIA SKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSP EGS+Q EAF LTGDA AAA+S NSAGEI DTLPTITEEE PA EAG VVGNSSTFE ELDKTGDQGQAIDERSDGER DGGR EAEP+SENKD STTSPTQ  ETLQ SPWLEE  GLSSREKELREGGSLGSASAGT P+TDGKRNRSNTVK+S AR ELSKQRADIALLVAQAKEGM YVAQSVDMADIKRGFVFTP+GVP+RDTAIRRELLRDGRSTLRTR
Sbjct:  534 KTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARLLNVAAEAYKDVVHVVPDFPDVAGEGPPLAKTRPHDTDTFHHVSLAMAHLRGARKVAIEIDDMTGKTDGASGGSVAGSLSLQSVDMTEDSSMATRSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQRQAAEADAEAKRLEESAMADVNEDKEEAGVEGKSSIAASKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPEEGSKQAEAFDLTGDAVAAANSTNSAGEI-DTLPTITEEEPPAPEAGEVVGNSSTFEDELDKTGDQGQAIDERSDGERRDGGRSEAEPSSENKDHSTTSPTQIGETLQGSPWLEEAAGLSSREKELREGGSLGSASAGTPPDTDGKRNRSNTVKESSARVELSKQRADIALLVAQAKEGMAYVAQSVDMADIKRGFVFTPYGVPIRDTAIRRELLRDGRSTLRTR 1369
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2431.1 vs. uniprot
Match: A0A6H5KSY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY7_9PHAE)

HSP 1 Score: 922 bits (2384), Expect = 0.000e+0
Identity = 753/913 (82.48%), Postives = 774/913 (84.78%), Query Frame = 0 
Query:    1 VPAIVGDNTALTNLNLSGNSLKGLPDTINSLSXXXXXXXXXXXLKTHSILPVGRKQKGPRLVSLEVLRLDGNRLAEGPEMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARFLNVATEAYEDVVHVVPDFPDVAGDGLPLAKTRPHDMDTFHHVNLAMVHLQGARKVDIEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAK--------------------------------VRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQXXXXXXXXXXKRLEESAMADVNEDKEEAGVEGESSIAPSKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPAEGSEQVEAFALTGDAAAAADSANSAGEIGDTLPTITEEELPASEAGLVVGNSSTFEGELDKTGDQGQAIDERSDGERGDGGRLEAEPTSENKDPSTTSPTQNEETLQESPWLEETGGLSSREKELREGGSLGSASAGTAPNTDGKRNRSNTVKDSPARAELSKQRADIALLVAQAKEGMTYVAQSVDMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR 881
            VPAIVGDNTALTNLNLSGNSLK LPDTINSL XXXXXXXXXXX KTHSILPVGRKQKGPRLVSLEVLRLDGNRL EGP+MVET KTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   ++ P       S +P +                H  ++  DWEEAAR LNVA EAYEDVVHVVPDFPDVAG+G  LAKTRPHDMDTFHHVNLAM HLQGARKV IEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTS+DTGEREERRQQE+ERAYLREKRN   GAAL AFSYADQLEQLSRPVGRSAGVWLGRAAV AEMG PGVALDDLELALVQLRKNAK                                VRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERK+KKAESDRKTNERLAVRQ   XXXXXXX RLEESAMADV EDKE   V    SIA SKADSSSPDGTRSDQSAAG+TVVTAIPST+ AAVDS  EGS+Q EAFALTGDA AAADSA+SAGEIGDTLPTITEEE P  EAG VVGNSS  E + DKTG QGQAIDER   ER DGGR EAEP+SENK P TTSPTQNEE+LQES WLE  GGLSSRE ELREGGSLGSAS GTAPNTDGKRN+ N+VKDSPARAELSKQRADIALLVAQAKEGM YVAQS+DMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR
Sbjct:    6 VPAIVGDNTALTNLNLSGNSLKDLPDTINSLXXXXXXXXXXXXXKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTEGPDMVETLKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------KRTP-------SPSPTK----------------HTKINGKDWEEAARLLNVAAEAYEDVVHVVPDFPDVAGEGPALAKTRPHDMDTFHHVNLAMAHLQGARKVAIEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTSMDTGEREERRQQEVERAYLREKRNXXXGAALLAFSYADQLEQLSRPVGRSAGVWLGRAAVTAEMGNPGVALDDLELALVQLRKNAKGRREQRNATSVEWGLLRGVRFSYWFRTNHCRKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKEKKAESDRKTNERLAVRQRQAXXXXXXXXRLEESAMADVKEDKEXXXVVXXXSIAASKADSSSPDGTRSDQSAAGNTVVTAIPSTKTAAVDSSEEGSKQAEAFALTGDAVAAADSADSAGEIGDTLPTITEEEPPVPEAGEVVGNSSISEDDSDKTGHQGQAIDERGARERADGGRSEAEPSSENKRPITTSPTQNEESLQESLWLEAAGGLSSRENELREGGSLGSASVGTAPNTDGKRNQRNSVKDSPARAELSKQRADIALLVAQAKEGMAYVAQSIDMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR 876
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2431.1 vs. uniprot
Match: D8LE77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE77_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.050e-35
Identity = 113/146 (77.40%), Postives = 117/146 (80.14%), Query Frame = 0 
Query:  927 AMAIYRDVEEAWERAQEEKESTKRIEATKRRVELEVLAAAEEKAQAEAAQTAIDKGQEGGVETQVENDDAPVESASPEASPGGPAKSPSSSTPTTKPANDTTKGQRXXXXXXXXXXXXXXXXXXELRKVLARRAAAGAKRVAGRRR 1072
            AMAIY DVEEAWER QEEKESTKRIEA KRRVELEVLAAAEEK                    +VENDDAPVESA P+A+PG PAKSPSSSTPTTKPANDTTKGQ XXXXXXXXXXXXXXXXX ELRKVLAR AAA AK+VAGRRR
Sbjct:   25 AMAIYGDVEEAWEREQEEKESTKRIEAAKRRVELEVLAAAEEKXXXXXXXXXXXXXXXXXXXXRVENDDAPVESAFPQAAPGAPAKSPSSSTPTTKPANDTTKGQXXXXXXXXXXXXXXXXXXPELRKVLARGAAARAKKVAGRRR 170
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig141.2431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LE76_ECTSI0.000e+092.95Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KSY7_9PHAE0.000e+082.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE77_ECTSI1.050e-3577.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 577..604
NoneNo IPR availableCOILSCoilCoilcoord: 555..575
NoneNo IPR availableCOILSCoilCoilcoord: 955..975
NoneNo IPR availableCOILSCoilCoilcoord: 1025..1048
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 178..196
e-value: 610.0
score: 0.1
coord: 8..27
e-value: 30.0
score: 10.1
coord: 245..264
e-value: 12.0
score: 13.1
coord: 31..50
e-value: 410.0
score: 1.4
coord: 61..80
e-value: 130.0
score: 5.2
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 84..104
e-value: 72.0
score: 8.6
coord: 245..267
e-value: 530.0
score: 1.5
coord: 31..52
e-value: 94.0
score: 7.6
coord: 130..148
e-value: 100.0
score: 7.4
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 109..279
coord: 174..305
NoneNo IPR availablePANTHERPTHR16083:SF17LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18coord: 2..116
coord: 60..192
coord: 174..305
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 2..116
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 60..192
NoneNo IPR availablePANTHERPTHR16083:SF17LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18coord: 109..279
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..315
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 245..268
e-value: 0.21
score: 20.7
coord: 222..244
e-value: 11.0
score: 13.0
coord: 61..84
e-value: 29.0
score: 9.4
coord: 153..175
e-value: 79.0
score: 5.9
coord: 31..55
e-value: 69.0
score: 6.4
coord: 9..30
e-value: 190.0
score: 2.7
coord: 176..199
e-value: 10.0
score: 13.2
coord: 130..152
e-value: 62.0
score: 6.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..325
e-value: 3.7E-67
score: 228.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 415..583
e-value: 3.8E-8
score: 35.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 319..545
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 33..54
score: 5.841
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 155..176
score: 6.341
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 63..84
score: 5.494
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 178..200
score: 6.033
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 132..153
score: 6.526
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 224..246
score: 5.294
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 10..31
score: 7.104
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 86..108
score: 6.803
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 247..269
score: 7.027
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 201..222
score: 5.433

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig141contigE-siliculosus-1a_F_contig141:64158..74100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig141.2431.1mRNA_E-siliculosus-1a_F_contig141.2431.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig141 64158..74100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig141.2431.1 ID=prot_E-siliculosus-1a_F_contig141.2431.1|Name=mRNA_E-siliculosus-1a_F_contig141.2431.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1073bp
VPAIVGDNTALTNLNLSGNSLKGLPDTINSLSALTRLDLSDNKLKTHSIL
PVGRKQKGPRLVSLEVLRLDGNRLAEGPEMVETFKTLTELDVSNNPIKNW
SLDVSNLRKMKHLRLRGVDLDRCPEGIGHLNKLEILDFSENRIDTLDQSM
AALFKLKRLGLRGNNIRDLGSCVGSMISLTSLDAGGNNLELISPELSRCT
ALETLDVSGGTINQLPDGLSMLTRLRVLRAQDNGLRAIPPDFETLTALEE
LRLGGNQLSSLPASLHTLTKMRYAELSRNSMESPPPVTRQWPLLTHLVLS
RNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARFLNVATEAYEDVVHV
VPDFPDVAGDGLPLAKTRPHDMDTFHHVNLAMVHLQGARKVDIEIDDMTG
KTDGASGSSVAGSLSLQSVDMTEDSSMVTTSIDTGEREERRQQELERAYL
REKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGV
ALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEE
RLLGEREAEQERKDKKAESDRKTNERLAVRQRQAAEAEAEAKRLEESAMA
DVNEDKEEAGVEGESSIAPSKADSSSPDGTRSDQSAAGDTVVTAIPSTEA
AAVDSPAEGSEQVEAFALTGDAAAAADSANSAGEIGDTLPTITEEELPAS
EAGLVVGNSSTFEGELDKTGDQGQAIDERSDGERGDGGRLEAEPTSENKD
PSTTSPTQNEETLQESPWLEETGGLSSREKELREGGSLGSASAGTAPNTD
GKRNRSNTVKDSPARAELSKQRADIALLVAQAKEGMTYVAQSVDMADIKR
GFVFTPHGVPVRDTAIRRELLRDGRSTLRTRHRRLLAVEAAKKRERARDA
GLMRRAFRQADARQKAGRAAKARKAAAMAIYRDVEEAWERAQEEKESTKR
IEATKRRVELEVLAAAEEKAQAEAAQTAIDKGQEGGVETQVENDDAPVES
ASPEASPGGPAKSPSSSTPTTKPANDTTKGQRQQKQQQEEDEEDEEEDDP
ELRKVLARRAAAGAKRVAGRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR011990TPR-like_helical_dom_sf
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp