mRNA_E-siliculosus-1a_F_contig141.2431.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig141.2431.1 vs. uniprot
Match: D8LE76_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE76_ECTSI) HSP 1 Score: 1021 bits (2640), Expect = 0.000e+0 Identity = 778/837 (92.95%), Postives = 791/837 (94.50%), Query Frame = 1
Query: 133 KTHSILPVGRKQKGPRLVSLEVLRLDGNRLAEGPEMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARFLNVATEAYEDVVHVVPDFPDVAGDGLPLAKTRPHDMDTFHHVNLAMVHLQGARKVDIEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQXXXXXXXXXXKRLEESAMADVNEDKEEAGVEGESSIAPSKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPAEGSEQVEAFALTGDAAAAADSANSAGEIGDTLPTITEEELPASEAGLVVGNSSTFEGELDKTGDQGQAIDERSDGERGDGGRLEAEPTSENKDPSTTSPTQNEETLQESPWLEETGGLSSREKELREGGSLGSASAGTAPNTDGKRNRSNTVKDSPARAELSKQRADIALLVAQAKEGMTYVAQSVDMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR 2643
KTHSILPVGRKQKGPRLVSLEVLRLDGNRL E P+MVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAAR LNVA EAY+DVVHVVPDFPDVAG+G PLAKTRPHD DTFHHV+LAM HL+GARKV IEIDDMTGKTDGASG SVAGSLSLQSVDMTEDSSM T SIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQ KRLEESAMADVNEDKEEAGVEG+SSIA SKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSP EGS+Q EAF LTGDA AAA+S NSAGEI DTLPTITEEE PA EAG VVGNSSTFE ELDKTGDQGQAIDERSDGER DGGR EAEP+SENKD STTSPTQ ETLQ SPWLEE GLSSREKELREGGSLGSASAGT P+TDGKRNRSNTVK+S AR ELSKQRADIALLVAQAKEGM YVAQSVDMADIKRGFVFTP+GVP+RDTAIRRELLRDGRSTLRTR
Sbjct: 534 KTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARLLNVAAEAYKDVVHVVPDFPDVAGEGPPLAKTRPHDTDTFHHVSLAMAHLRGARKVAIEIDDMTGKTDGASGGSVAGSLSLQSVDMTEDSSMATRSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQRQAAEADAEAKRLEESAMADVNEDKEEAGVEGKSSIAASKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPEEGSKQAEAFDLTGDAVAAANSTNSAGEI-DTLPTITEEEPPAPEAGEVVGNSSTFEDELDKTGDQGQAIDERSDGERRDGGRSEAEPSSENKDHSTTSPTQIGETLQGSPWLEEAAGLSSREKELREGGSLGSASAGTPPDTDGKRNRSNTVKESSARVELSKQRADIALLVAQAKEGMAYVAQSVDMADIKRGFVFTPYGVPIRDTAIRRELLRDGRSTLRTR 1369
BLAST of mRNA_E-siliculosus-1a_F_contig141.2431.1 vs. uniprot
Match: A0A6H5KSY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY7_9PHAE) HSP 1 Score: 922 bits (2384), Expect = 0.000e+0 Identity = 753/913 (82.48%), Postives = 774/913 (84.78%), Query Frame = 1
Query: 1 VPAIVGDNTALTNLNLSGNSLKGLPDTINSLSXXXXXXXXXXXLKTHSILPVGRKQKGPRLVSLEVLRLDGNRLAEGPEMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARFLNVATEAYEDVVHVVPDFPDVAGDGLPLAKTRPHDMDTFHHVNLAMVHLQGARKVDIEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAK--------------------------------VRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQXXXXXXXXXXKRLEESAMADVNEDKEEAGVEGESSIAPSKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPAEGSEQVEAFALTGDAAAAADSANSAGEIGDTLPTITEEELPASEAGLVVGNSSTFEGELDKTGDQGQAIDERSDGERGDGGRLEAEPTSENKDPSTTSPTQNEETLQESPWLEETGGLSSREKELREGGSLGSASAGTAPNTDGKRNRSNTVKDSPARAELSKQRADIALLVAQAKEGMTYVAQSVDMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR 2643
VPAIVGDNTALTNLNLSGNSLK LPDTINSL XXXXXXXXXXX KTHSILPVGRKQKGPRLVSLEVLRLDGNRL EGP+MVET KTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ P S +P + H ++ DWEEAAR LNVA EAYEDVVHVVPDFPDVAG+G LAKTRPHDMDTFHHVNLAM HLQGARKV IEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTS+DTGEREERRQQE+ERAYLREKRN GAAL AFSYADQLEQLSRPVGRSAGVWLGRAAV AEMG PGVALDDLELALVQLRKNAK VRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERK+KKAESDRKTNERLAVRQ XXXXXXX RLEESAMADV EDKE V SIA SKADSSSPDGTRSDQSAAG+TVVTAIPST+ AAVDS EGS+Q EAFALTGDA AAADSA+SAGEIGDTLPTITEEE P EAG VVGNSS E + DKTG QGQAIDER ER DGGR EAEP+SENK P TTSPTQNEE+LQES WLE GGLSSRE ELREGGSLGSAS GTAPNTDGKRN+ N+VKDSPARAELSKQRADIALLVAQAKEGM YVAQS+DMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR
Sbjct: 6 VPAIVGDNTALTNLNLSGNSLKDLPDTINSLXXXXXXXXXXXXXKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTEGPDMVETLKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------KRTP-------SPSPTK----------------HTKINGKDWEEAARLLNVAAEAYEDVVHVVPDFPDVAGEGPALAKTRPHDMDTFHHVNLAMAHLQGARKVAIEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTSMDTGEREERRQQEVERAYLREKRNXXXGAALLAFSYADQLEQLSRPVGRSAGVWLGRAAVTAEMGNPGVALDDLELALVQLRKNAKGRREQRNATSVEWGLLRGVRFSYWFRTNHCRKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKEKKAESDRKTNERLAVRQRQAXXXXXXXXRLEESAMADVKEDKEXXXVVXXXSIAASKADSSSPDGTRSDQSAAGNTVVTAIPSTKTAAVDSSEEGSKQAEAFALTGDAVAAADSADSAGEIGDTLPTITEEEPPVPEAGEVVGNSSISEDDSDKTGHQGQAIDERGARERADGGRSEAEPSSENKRPITTSPTQNEESLQESLWLEAAGGLSSRENELREGGSLGSASVGTAPNTDGKRNQRNSVKDSPARAELSKQRADIALLVAQAKEGMAYVAQSIDMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR 876
BLAST of mRNA_E-siliculosus-1a_F_contig141.2431.1 vs. uniprot
Match: D8LE77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE77_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.050e-35 Identity = 113/146 (77.40%), Postives = 117/146 (80.14%), Query Frame = 1
Query: 2779 AMAIYRDVEEAWERAQEEKESTKRIEATKRRVELEVLAAAEEKAQAEAAQTAIDKGQEGGVETQVENDDAPVESASPEASPGGPAKSPSSSTPTTKPANDTTKGQRXXXXXXXXXXXXXXXXXXELRKVLARRAAAGAKRVAGRRR 3216
AMAIY DVEEAWER QEEKESTKRIEA KRRVELEVLAAAEEK +VENDDAPVESA P+A+PG PAKSPSSSTPTTKPANDTTKGQ XXXXXXXXXXXXXXXXX ELRKVLAR AAA AK+VAGRRR
Sbjct: 25 AMAIYGDVEEAWEREQEEKESTKRIEAAKRRVELEVLAAAEEKXXXXXXXXXXXXXXXXXXXXRVENDDAPVESAFPQAAPGAPAKSPSSSTPTTKPANDTTKGQXXXXXXXXXXXXXXXXXXPELRKVLARGAAARAKKVAGRRR 170 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig141.2431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig141.2431.1 >prot_E-siliculosus-1a_F_contig141.2431.1 ID=prot_E-siliculosus-1a_F_contig141.2431.1|Name=mRNA_E-siliculosus-1a_F_contig141.2431.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1073bp VPAIVGDNTALTNLNLSGNSLKGLPDTINSLSALTRLDLSDNKLKTHSILback to top mRNA from alignment at E-siliculosus-1a_F_contig141:64158..74100- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig141.2431.1 ID=mRNA_E-siliculosus-1a_F_contig141.2431.1|Name=mRNA_E-siliculosus-1a_F_contig141.2431.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9943bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig141:64158..74100- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig141:64158..74100- >mRNA_E-siliculosus-1a_F_contig141.2431.1 ID=mRNA_E-siliculosus-1a_F_contig141.2431.1|Name=mRNA_E-siliculosus-1a_F_contig141.2431.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6438bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig141:64158..74100- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |