prot_E-siliculosus-1a_F_contig1406.2404.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1406.2404.1
Unique Nameprot_E-siliculosus-1a_F_contig1406.2404.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length246
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: A0A6H5KIY4_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY4_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 3.400e-35
Identity = 139/198 (70.20%), Postives = 142/198 (71.72%), Query Frame = 0
Query:   49 PRDDSIKPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGVKPPERXXXXXXXXXXXXXXXXXXXXXXXXEKAAAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERELTAGATSTPPARGSADAXXXXXXXXXXXXXNGAAAEGGSA 246
            PRDDSIKP+VVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEAR+RVGGRCYTKRWISSGVKPPER XXXXX                    AAAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 E+EL A ATSTPPA  SADA              GAAAEGGSA
Sbjct:  513 PRDDSIKPIVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARRRVGGRCYTKRWISSGVKPPERPXXXXXSTKGPRVARREAA-------AAAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGAAEKVPEKG-----EQELAASATSTPPAPDSADAAIAAAPDSGK---RGAAAEGGSA 695          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: D8LQQ1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ1_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.040e-15
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0
Query:   76 AGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGVKPPER 119
            +GLG ALELQKLGIEVIV EARQRVGGRCYTKRWISSGVKPPER
Sbjct:  454 SGLGGALELQKLGIEVIVGEARQRVGGRCYTKRWISSGVKPPER 497          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: UPI0003602C02 (flavin monoamine oxidase family protein n=1 Tax=Longispora albida TaxID=203523 RepID=UPI0003602C02)

HSP 1 Score: 68.6 bits (166), Expect = 1.180e-9
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   49 PRDDSIKPVVVSSLGR----PHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGV 114
            P  DSI  VV + LGR    P RV+V+GAG AGL AA ELQ+ G E +V+EA+ RVGGR YT R  + G+
Sbjct:   29 PVPDSILDVVTAGLGRREQHPKRVIVIGAGMAGLVAAFELQRQGHEPVVLEAQNRVGGRVYTMRDFAPGL 98          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: A0A7X4BVU0_9BACT (FAD-dependent oxidoreductase n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4BVU0_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 2.720e-8
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   49 PRDDSIKPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKR 108
            P +    P  +++ GRP R+VVVGAG AGL AA EL + G EV V+EAR+RVGGR  T R
Sbjct:   32 PVEPEDSPGALAATGRPMRIVVVGAGMAGLAAAYELSRAGHEVTVLEARERVGGRVLTLR 91          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: A0A7S2SPD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPD9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.980e-8
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 0
Query:   64 RPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTK 107
            R  RVVV+GAG AGL AA EL+KLG EVIV+EAR R+GGRC+++
Sbjct:  131 RLFRVVVIGAGMAGLAAARELEKLGFEVIVLEARHRIGGRCHSE 174          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: UPI0016899B31 (FAD-dependent oxidoreductase n=2 Tax=Phormidium sp. FACHB-1136 TaxID=2692848 RepID=UPI0016899B31)

HSP 1 Score: 63.5 bits (153), Expect = 5.430e-8
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0
Query:   61 SLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYT 106
            ++  P RV+VVGAG AGL AA ELQ+LG EV+VVEAR R+GGR +T
Sbjct:   31 TVSNPKRVIVVGAGLAGLAAAQELQRLGHEVVVVEARDRIGGRVWT 76          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: A0A838MFQ8_9HYPH (FAD-dependent oxidoreductase n=3 Tax=Rhizobiaceae TaxID=82115 RepID=A0A838MFQ8_9HYPH)

HSP 1 Score: 63.2 bits (152), Expect = 7.670e-8
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   53 SIKPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGVK 115
            ++KP   ++ G+P +V+VVGAG AGL AA  L + GIEVIVVEAR R+GGR  T R +   V+
Sbjct:   71 ALKPAFAAAAGKP-KVIVVGAGIAGLSAARTLMRHGIEVIVVEARDRIGGRISTDRSLGVAVE 132          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: A0A6G1SFH7_9ACAR (Lysine-specific histone demethylase 1A n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SFH7_9ACAR)

HSP 1 Score: 63.2 bits (152), Expect = 9.210e-8
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0
Query:   55 KPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKR 108
            KP + S   R  RV+V+GAG +GL AA +LQK G+EVIV+EAR RVGGR +T R
Sbjct:  259 KPPLKSGGKRAGRVIVIGAGLSGLAAARQLQKFGMEVIVLEARNRVGGRVHTYR 312          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: A0A2S9F344_9MYCO (Monooxygenase (Fragment) n=1 Tax=Mycobacterium sp. ITM-2017-0098 TaxID=2099692 RepID=A0A2S9F344_9MYCO)

HSP 1 Score: 57.4 bits (137), Expect = 9.490e-8
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   68 VVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYT 106
            VVVVGAGFAGL AA EL +LG +V+V+E R RVGGR YT
Sbjct:    4 VVVVGAGFAGLSAARELSRLGRDVVVLEGRDRVGGRSYT 42          
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Match: A0A3M2BNE9_9BACT (FAD-binding protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2BNE9_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 1.320e-7
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   64 RPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRVGGRCYTKRWISSGV 114
            R  RVVV+GAG AGLGAA ELQ+ G  V+V+EAR R+GGR +T R + + V
Sbjct:   25 RAERVVVIGAGAAGLGAAAELQRAGYSVLVIEARDRLGGRIFTDRSLGAPV 75          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1406.2404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIY4_9PHAE3.400e-3570.20PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LQQ1_ECTSI2.040e-1593.18PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
UPI0003602C021.180e-954.29flavin monoamine oxidase family protein n=1 Tax=Lo... [more]
A0A7X4BVU0_9BACT2.720e-855.00FAD-dependent oxidoreductase n=3 Tax=Gemmatimonade... [more]
A0A7S2SPD9_9STRA4.980e-868.18Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
UPI0016899B315.430e-865.22FAD-dependent oxidoreductase n=2 Tax=Phormidium sp... [more]
A0A838MFQ8_9HYPH7.670e-852.38FAD-dependent oxidoreductase n=3 Tax=Rhizobiaceae ... [more]
A0A6G1SFH7_9ACAR9.210e-859.26Lysine-specific histone demethylase 1A n=1 Tax=Ace... [more]
A0A2S9F344_9MYCO9.490e-871.79Monooxygenase (Fragment) n=1 Tax=Mycobacterium sp.... [more]
A0A3M2BNE9_9BACT1.320e-758.82FAD-binding protein n=1 Tax=Acidobacteria bacteriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13450NAD_binding_8coord: 70..108
e-value: 9.4E-10
score: 38.6
NoneNo IPR availablePANTHERPTHR10742AMINE OXIDASEcoord: 9..124
NoneNo IPR availablePANTHERPTHR10742:SF350LYSINE-SPECIFIC HISTONE DEMETHYLASE 1Acoord: 9..124
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 62..189
e-value: 5.4E-17
score: 64.9
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 59..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1406contigE-siliculosus-1a_F_contig1406:2574..3952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1406.2404.1mRNA_E-siliculosus-1a_F_contig1406.2404.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1406 2574..3952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1406.2404.1 ID=prot_E-siliculosus-1a_F_contig1406.2404.1|Name=mRNA_E-siliculosus-1a_F_contig1406.2404.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=246bp
QRQQQPQQSSRKKKRRQEDTSTADAAKKKRKVQGGGGGDSTATARKKKPR
DDSIKPVVVSSLGRPHRVVVVGAGFAGLGAALELQKLGIEVIVVEARQRV
GGRCYTKRWISSGVKPPERPPPPPPSTKGPRVARREAAAAAAAEKAAAEK
AATAEKAAGEKAAAEKAAAGETAAEGKEAAGEKAAAEKDGAGEKAAENEP
ETGERELTAGATSTPPARGSADAAAAAAAAAPDSEKNGAAAEGGSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf