prot_E-siliculosus-1a_F_contig14040.2399.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14040.2399.1
Unique Nameprot_E-siliculosus-1a_F_contig14040.2399.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length107
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig14040.2399.1 vs. uniprot
Match: A0A6H5KJT7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJT7_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 5.910e-61
Identity = 104/107 (97.20%), Postives = 107/107 (100.00%), Query Frame = 0 
Query:    1 ALWDTSVRYNLDEDPRKMEQHASKDAMNSKYSAAALGGEDAKVVALSSGRHMFFFAVGEGSGKQVESVGAAHGSSGTSILSMLASKDGKLLATTAAGDSRARLWRFP 107
            ALWDTSVRYNLDEDPRK+EQHASKDAMNSKYSAAALGGEDAKVVALSSGRH+FFF+VGEGSGKQVESVGAAHGSSGTSILSMLASKDGKLLATTAAGDSRARLWRFP
Sbjct:  317 ALWDTSVRYNLDEDPRKLEQHASKDAMNSKYSAAALGGEDAKVVALSSGRHIFFFSVGEGSGKQVESVGAAHGSSGTSILSMLASKDGKLLATTAAGDSRARLWRFP 423
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BLAST of mRNA_E-siliculosus-1a_F_contig14040.2399.1 vs. uniprot
Match: A0A835Z556_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z556_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.420e-7
Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 0 
Query:    2 LWDTSVRYNLDEDPRKMEQHASKDAMNSKYSAAALGGEDAKVVALSSGRHMFFFAVGEGSGKQVESVGAAHGSSGTSILSMLASKDGKLLATTAAGDSRARLWRFP 107
            +WD +VRYNLDEDPR    +   DA     +  A G    KVVA+S+G+ + +F+   G+  QV  V  A G+   SI+ + + +D   +A  A+G+  A LW+FP
Sbjct:  388 VWDITVRYNLDEDPRCQGTYPL-DATKGVPTGIAFG-PGGKVVAISAGKRLLYFSAETGA--QVGEVADACGTG--SIVGLKSPRDAHCVAVVASGNKHAFLWKFP 487
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14040.2399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJT7_9PHAE5.910e-6197.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z556_9STRA2.420e-737.74WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14040contigE-siliculosus-1a_F_contig14040:179..499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14040.2399.1mRNA_E-siliculosus-1a_F_contig14040.2399.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14040 179..499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14040.2399.1 ID=prot_E-siliculosus-1a_F_contig14040.2399.1|Name=mRNA_E-siliculosus-1a_F_contig14040.2399.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=107bp
ALWDTSVRYNLDEDPRKMEQHASKDAMNSKYSAAALGGEDAKVVALSSGR
HMFFFAVGEGSGKQVESVGAAHGSSGTSILSMLASKDGKLLATTAAGDSR
ARLWRFP
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