prot_E-siliculosus-1a_F_contig1404.2398.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1404.2398.1
Unique Nameprot_E-siliculosus-1a_F_contig1404.2398.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length190
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1404.2398.1 vs. uniprot
Match: D7FXM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM6_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 8.630e-110
Identity = 179/190 (94.21%), Postives = 180/190 (94.74%), Query Frame = 0 
Query:    1 TEWRAGFLRERSHLCRGTRECAVRALLASARGEHGIPAWGPAGVRGRLDPLDGVRLSAVWRGLGGDRPLPHAPLELLCDYLSPPGGSSSLSQWEASVSWETASLSAGSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARERARHIGAVLGPSTKELIARMTTAPPRGDGESGDSTDGDDRA 190
            TEWRAGFLRERSHLCRGTRECAVR LLASARGEHGIPAWGP G     DPLDGVRLSAVWRGLGGDRPLPHAPLELLCDYLSPPGGSSSLSQWEASVSWET SLSAGSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARERARHIGAVLGPST+ELIARMTTAP RGDGESGD TDGDDRA
Sbjct:  332 TEWRAGFLRERSHLCRGTRECAVRTLLASARGEHGIPAWGPEG-----DPLDGVRLSAVWRGLGGDRPLPHAPLELLCDYLSPPGGSSSLSQWEASVSWETTSLSAGSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPRRGDGESGDGTDGDDRA 516
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BLAST of mRNA_E-siliculosus-1a_F_contig1404.2398.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 3.220e-103
Identity = 175/189 (92.59%), Postives = 176/189 (93.12%), Query Frame = 0 
Query:    2 EWRAGFLRERSHLCRGTRECAVRALLASARGEHGIPAWGPAGVRGRLDPLDGVRLSAVWRGLGGDRPLPHAPLELLCDYLSPPGGSSSLSQWEASVSWETASLSAGSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARERARHIGAVLGPSTKELIARMTTAPPRGDGESGDSTDGDDRA 190
            EWRAGFLRERSHLCRGTRECAVRALLASARGEHGIPAWGP G     DPLDGVRLSAVWRGLGGDRPLPH PLELL D LSPPGG SSLSQWEASVSWETASLSAGSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARERARHIGAVLGPST+ELIARMTTAPPRGDGESG  T GDDRA
Sbjct:  332 EWRAGFLRERSHLCRGTRECAVRALLASARGEHGIPAWGPEG-----DPLDGVRLSAVWRGLGGDRPLPHTPLELLRDNLSPPGGGSSLSQWEASVSWETASLSAGSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPPRGDGESGGGTHGDDRA 515
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1404.2398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXM6_ECTSI8.630e-11094.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3A9_9PHAE3.220e-10392.59Rab3 GTPase-activating protein catalytic subunit n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1404contigE-siliculosus-1a_F_contig1404:29777..32747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1404.2398.1mRNA_E-siliculosus-1a_F_contig1404.2398.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1404 29777..32748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1404.2398.1 ID=prot_E-siliculosus-1a_F_contig1404.2398.1|Name=mRNA_E-siliculosus-1a_F_contig1404.2398.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=190bp
TEWRAGFLRERSHLCRGTRECAVRALLASARGEHGIPAWGPAGVRGRLDP
LDGVRLSAVWRGLGGDRPLPHAPLELLCDYLSPPGGSSSLSQWEASVSWE
TASLSAGSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARER
ARHIGAVLGPSTKELIARMTTAPPRGDGESGDSTDGDDRA
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