prot_E-siliculosus-1a_F_contig1404.2397.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1404.2397.1
Unique Nameprot_E-siliculosus-1a_F_contig1404.2397.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length208
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1404.2397.1 vs. uniprot
Match: D7FXM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM6_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 1.480e-120
Identity = 193/208 (92.79%), Postives = 200/208 (96.15%), Query Frame = 0 
Query:    1 MTAGGAATAGDEGDISEFPNLASFFGEEECSLDAWLTPEPSSSSATMSSREQEADERELLEDMEAWQLLHSWFGFGDILCLHEAATNPASPSRSGDGAGTGLSLEQLLSTGVMAMEDRRCGAVLAVQQQPGGDGDGRRGRGSRDSASRRGVSVKGYATLSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELLADKALSAWGR 208
            MTAGGAATAGDEGDIS FP+LASFFGEEECSLDAWL PEPSSS+ATMSSRE+EADERE LED+EAW LL SWFGFGD+LCLHEAAT PAS SRSGDGAGTGLSLEQLLSTGVMAMEDRRCGAVLA+QQQPGGDG+GRRGRGSRDSASRRGVSVKGYATLSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELL DKALSAWGR
Sbjct:   88 MTAGGAATAGDEGDISAFPDLASFFGEEECSLDAWLAPEPSSSAATMSSREEEADEREFLEDVEAWHLLRSWFGFGDLLCLHEAATKPASSSRSGDGAGTGLSLEQLLSTGVMAMEDRRCGAVLAMQQQPGGDGNGRRGRGSRDSASRRGVSVKGYATLSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELLTDKALSAWGR 295
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BLAST of mRNA_E-siliculosus-1a_F_contig1404.2397.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.030e-113
Identity = 189/208 (90.87%), Postives = 196/208 (94.23%), Query Frame = 0 
Query:    1 MTAGGAATAGDEGDISEFPNLASFFGEEECSLDAWLTPEPSSSSATMSSREQEADERELLEDMEAWQLLHSWFGFGDILCLHEAATNPASPSRSGDGAGTGLSLEQLLSTGVMAMEDRRCGAVLAVQQQPGGDGDGRRGRGSRDSASRRGVSVKGYATLSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELLADKALSAWGR 208
            ++AGGAATAGDEGDISEFP+LASFFGEEECSLDAWL PEPSSSSATMSSRE+EADERE LEDM AW LL SWFGFGD+LCLHEAATNPAS SRSGDGAGT LSLEQLLSTGVMAMEDRRCGAVLA+QQQPGGDGDGRRGR SRDSASRRGVSVKGYATLSP GHADWTRRAETV LESEASS +PRSRLSLEALGELL DKALSAWGR
Sbjct:   87 ISAGGAATAGDEGDISEFPDLASFFGEEECSLDAWLAPEPSSSSATMSSREEEADEREFLEDMGAWHLLRSWFGFGDLLCLHEAATNPASSSRSGDGAGTVLSLEQLLSTGVMAMEDRRCGAVLAMQQQPGGDGDGRRGRCSRDSASRRGVSVKGYATLSPIGHADWTRRAETVCLESEASSAIPRSRLSLEALGELLTDKALSAWGR 294
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1404.2397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXM6_ECTSI1.480e-12092.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3A9_9PHAE1.030e-11390.87Rab3 GTPase-activating protein catalytic subunit n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1404contigE-siliculosus-1a_F_contig1404:26764..28812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1404.2397.1mRNA_E-siliculosus-1a_F_contig1404.2397.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1404 25536..28812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1404.2397.1 ID=prot_E-siliculosus-1a_F_contig1404.2397.1|Name=mRNA_E-siliculosus-1a_F_contig1404.2397.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=208bp
MTAGGAATAGDEGDISEFPNLASFFGEEECSLDAWLTPEPSSSSATMSSR
EQEADERELLEDMEAWQLLHSWFGFGDILCLHEAATNPASPSRSGDGAGT
GLSLEQLLSTGVMAMEDRRCGAVLAVQQQPGGDGDGRRGRGSRDSASRRG
VSVKGYATLSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELLAD
KALSAWGR
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