prot_E-siliculosus-1a_F_contig14037.2393.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14037.2393.1
Unique Nameprot_E-siliculosus-1a_F_contig14037.2393.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length78
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.260e-45
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query:    1 MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR
Sbjct:  586 MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 663          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: D8LP31_ECTSI (EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP31_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.960e-45
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0
Query:    1 MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            MRDGNRRLFVNS GEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR
Sbjct:  604 MRDGNRRLFVNSNGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 681          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.940e-30
Identity = 53/73 (72.60%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    6 RRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            RRLFVN+KG+ WT  D  SRFK+IG +WLGI NF PHVCRTFW+THALNSGQ++ SN++DFSS+LQVSS TLR
Sbjct:  580 RRLFVNTKGQSWTQKDISSRFKRIGMHWLGISNFGPHVCRTFWSTHALNSGQISGSNLEDFSSFLQVSSTTLR 652          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 5.480e-30
Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    6 RRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            RRLFVN+KG+ WT  D  SRFK+IG +WLGI NF PHVCRTFW+THALNSGQ++ SN++DFSS++QVSS TLR
Sbjct:  580 RRLFVNTKGQSWTQKDISSRFKRIGMHWLGISNFGPHVCRTFWSTHALNSGQISGSNLEDFSSFIQVSSTTLR 652          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 5.540e-30
Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    3 DGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            +G RRLFVN++G+GW   D  SRFKKIG  WL IENF PHVCR+FWA+ ALNSGQVNS+N++DFSS+LQVSSATLR
Sbjct:  615 NGRRRLFVNARGQGWNQKDISSRFKKIGIEWLSIENFGPHVCRSFWASSALNSGQVNSNNLEDFSSFLQVSSATLR 690          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 9.100e-29
Identity = 54/77 (70.13%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    3 DGNR-RLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            DGN  RLFVNSKG+ WT  D  SRFK+IG  WLGI+NF PHVCR+FW+THAL+SGQV++SN+++FSS+LQVSS+TLR
Sbjct:  601 DGNGGRLFVNSKGQSWTQKDVSSRFKRIGMQWLGIQNFGPHVCRSFWSTHALSSGQVSASNLENFSSFLQVSSSTLR 677          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: D7FL01_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL01_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.790e-27
Identity = 53/78 (67.95%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            M D  RRLF+NSKGE WT  D  SRFK IGA WLGI+ F PH CR+F+ATHALN+GQV  +N+++FSS+LQVSSATLR
Sbjct:  425 MGDDTRRLFLNSKGESWTQKDIGSRFKIIGANWLGIQKFCPHACRSFYATHALNTGQVTPANVENFSSFLQVSSATLR 502          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: D7FZG9_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG9_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 4.440e-27
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    1 MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            M+D  R+L +NSKG G+  ND  S FKKIGA+WLG+ NF  H CRTFWAT ALNSGQV+ SNI+DF S+LQVSS+TLR
Sbjct:  406 MKDSKRKLLLNSKGRGYVQNDINSPFKKIGAHWLGLPNFCVHTCRTFWATAALNSGQVDPSNIEDFGSFLQVSSSTLR 483          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 9.820e-27
Identity = 51/78 (65.38%), Postives = 64/78 (82.05%), Query Frame = 0
Query:    1 MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            M+D  R+L +NSKG+G+  +D +S FKKIGA+WLG+ NF  H CRTFWAT ALNSGQV+ SNI+DF S+LQVSS+TLR
Sbjct: 1131 MKDDKRKLLLNSKGQGYVQSDIKSPFKKIGAHWLGLPNFCVHTCRTFWATAALNSGQVDPSNIEDFGSFLQVSSSTLR 1208          
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K)

HSP 1 Score: 110 bits (275), Expect = 1.800e-26
Identity = 52/78 (66.67%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLR 78
            M+D  R+L +NSKG G   ND  S FKKIGA+WLG+ NF  H CRTFWAT ALNSGQV+ SNI+DF S+LQVSS+TLR
Sbjct:  596 MKDSKRKLLLNSKGRGCVQNDINSPFKKIGAHWLGLPNFCVHTCRTFWATAALNSGQVDPSNIEDFGSFLQVSSSTLR 673          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JVT4_9PHAE1.260e-45100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP31_ECTSI3.960e-4598.72EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP... [more]
A0A6H5L2T2_9PHAE2.940e-3072.60Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0T8_9PHAE5.480e-3071.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9C0_9PHAE5.540e-3072.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B2KWI6_ECTSI9.100e-2970.13EsV-1-213-like protein 2 n=1 Tax=Ectocarpus silicu... [more]
D7FL01_ECTSI1.790e-2767.95EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FZG9_ECTSI4.440e-2766.67EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JJP2_9PHAE9.820e-2765.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN77_ESV1K1.800e-2666.67EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K[more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 2..77
e-value: 1.6E-6
score: 29.6
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 3..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14037contigE-siliculosus-1a_F_contig14037:954..1187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14037.2393.1mRNA_E-siliculosus-1a_F_contig14037.2393.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14037 943..1187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14037.2393.1 ID=prot_E-siliculosus-1a_F_contig14037.2393.1|Name=mRNA_E-siliculosus-1a_F_contig14037.2393.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=78bp
MRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWAT
HALNSGQVNSSNIDDFSSYLQVSSATLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011010DNA_brk_join_enz
IPR013762Integrase-like_cat_sf