prot_E-siliculosus-1a_F_contig1403.2388.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1403.2388.1
Unique Nameprot_E-siliculosus-1a_F_contig1403.2388.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length142
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2388.1 vs. uniprot
Match: D8LE47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE47_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 5.310e-93
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0
Query:    1 MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVVIDADTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKPKPEDGALALLRWLKTSGAAKKR 141
            MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVV+DADTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKPKPEDG LALLRWLKTSGAAKKR
Sbjct:    1 MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVVMDADTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKPKPEDGTLALLRWLKTSGAAKKR 141          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2388.1 vs. uniprot
Match: A0A6H5JCG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG4_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 6.070e-91
Identity = 137/141 (97.16%), Postives = 139/141 (98.58%), Query Frame = 0
Query:    1 MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVVIDADTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKPKPEDGALALLRWLKTSGAAKKR 141
            MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGS+VID DTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRA+KITAKLGEQEARLKDLNRVKAVPKPKPEDGALALLRWLK SGAAKKR
Sbjct:   68 MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSIVIDEDTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRADKITAKLGEQEARLKDLNRVKAVPKPKPEDGALALLRWLKNSGAAKKR 208          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2388.1 vs. uniprot
Match: A0A7S1BP69_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP69_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.540e-14
Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = 0
Query:    1 MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVVIDADTGKAIGGWDPAWD----IFEAPAPRPLRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKP 119
            + +LV+FG  AL+PQ V G  +W+ P++S R A  +RK++I  G++G+   D  TG    GWDPAWD    I    A   LRPPKLHKN RDR  RA  I + +   + R+    + K   KP
Sbjct:   12 IRKLVQFGEAALRPQLVNG--RWRKPQISPRYAARIRKESIACGTYGT--FDPTTGS---GWDPAWDSPGRIGTTSA---LRPPKLHKNYRDRENRATNIESLMEGMDERIDQFRKEKQDKKP 124          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2388.1 vs. uniprot
Match: A0A7S4KCW7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCW7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 9.900e-14
Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 0
Query:    4 LVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVVIDADTGKAIGGWDPAWDIFEAPAPRP---LRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKPKPEDGALALLRWLKTSGAAKK 140
            L+R G +AL+PQ V    KW+ P +S RKA V+RK AI+DG++GS   D + GK   GW+P WD      PR    LR PK  K +R R  RA KI + L + + R++     K   KP+P  G L L++ +      KK
Sbjct:   19 LIRHGEQALRPQFVN--EKWRRPLISMRKAAVIRKGAIKDGTYGS--FDPENGK---GWNPMWDT-----PRKITSLRLPKETKRERTREARASKIESLLEQADDRIETYRLEKEALKPEP--GVLNLIKKMNKGTRRKK 144          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2388.1 vs. uniprot
Match: A0A7S0AE13_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AE13_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.550e-13
Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    4 LVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVVIDADTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKPKP 121
            L R G EA KPQ V  +  W+ P VS R+A VLRK A+RDG++G+   D  TG+   GWDP WD  +      +RPPK  K +R R  RA++I   L + + +++   + +   KP+P
Sbjct:   36 LKRHGEEAFKPQFVKES--WRKPAVSGREAAVLRKAAVRDGTYGA--FDPQTGR---GWDPLWD--KPGKVSSIRPPKETKRERTRESRAQRIEQLLEQADEKIESYRKAQLEKKPEP 144          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2388.1 vs. uniprot
Match: A0A7R9ZNN0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZNN0_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.330e-9
Identity = 44/117 (37.61%), Postives = 60/117 (51.28%), Query Frame = 0
Query:    1 MNRLVRFGAEALKPQRVAG-----------AHKWQTPRVSRRKANVLRKKAIRDGSFGSVVIDADTGKAIGGWDPAWDI------FEAPAPRPLRPPKLHKNQRDRAQRAEKITAKL 100
            +  L + GAEALKPQ+V              H W+ P VS+R   VLRK+A+RDG++G+   D  TG    GWDP WD       F+      ++P K    +R R +RA+KI   L
Sbjct:    5 LRHLCQKGAEALKPQKVLSKAAENGFTYKETHVWRRPVVSKRVGKVLRKQALRDGTYGT--FDVTTGV---GWDPLWDPVLMPNQFKVSRYGRMQPKKKTSRERTREERAQKIEKNL 116          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LE47_ECTSI5.310e-9398.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCG4_9PHAE6.070e-9197.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1BP69_9STRA4.540e-1441.46Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4KCW7_9STRA9.900e-1440.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0AE13_9STRA5.550e-1339.83Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7R9ZNN0_9STRA1.330e-937.61Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1403contigE-siliculosus-1a_F_contig1403:22799..25277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1403.2388.1mRNA_E-siliculosus-1a_F_contig1403.2388.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1403 22703..25986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1403.2388.1 ID=prot_E-siliculosus-1a_F_contig1403.2388.1|Name=mRNA_E-siliculosus-1a_F_contig1403.2388.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=142bp
MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVV
IDADTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRAEKITAKL
GEQEARLKDLNRVKAVPKPKPEDGALALLRWLKTSGAAKKR*
back to top