prot_E-siliculosus-1a_F_contig1403.2387.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1403.2387.1
Unique Nameprot_E-siliculosus-1a_F_contig1403.2387.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length600
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE)

HSP 1 Score: 679 bits (1753), Expect = 6.560e-239
Identity = 409/482 (84.85%), Postives = 419/482 (86.93%), Query Frame = 0
Query:   93 LLLAAG---RGGVSSQFTDGGAVDLSCGLCDCSGSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFESFCYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGAASSSADAFICGEDLPAPTPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXXPAXXTAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYEDEDACILPESKPCTEATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCESLTGGEERSGFSVLRV-KLAPR 570
            L LAAG    GGVSSQFTDGGAVDLSCGLCDC+GSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVY LSG GDLDSR LEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWT+DGSTFYKSFTNTKVFGTTVVEYEFESFCYENEFLSQVFLVTVL TTYKYNFEFALPGEPTSSDLSVSGAASSSA+AFICGEDLPA TPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXX  XXTA+AAA XXXXXXXXXX               XXXXXXXXX                   TETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYEDE ACILPESKPCTEATSFSNTNEGIGDYY+PACELVEGEEQLGGCNADASSLCRMCFFNTPLYV KHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRC S +        + + V ++ PR
Sbjct:   49 LALAAGLVLAGGVSSQFTDGGAVDLSCGLCDCTGSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVYELSGAGDLDSRVLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTEDGSTFYKSFTNTKVFGTTVVEYEFESFCYENEFLSQVFLVTVLGTTYKYNFEFALPGEPTSSDLSVSGAASSSAEAFICGEDLPATTPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAAAAXXXXXXXXXXTEAPQAAAAATAAPVXXXXXXXXXPANTTTAAPTLPAVGNVM-TETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYEDEGACILPESKPCTEATSFSNTNEGIGDYYDPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVAKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCVSASPAPSSPALTEIPVGEITPR 529          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: D8LE46_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE46_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 2.370e-83
Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0
Query:  141 RIVSVDGDYSEILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFESFCYENEFLSQVFLVTVLDTTYKYNFE 283
            +IVSVDGDYSEILDTSCGTSAVAVGSTVY LSGVGDLDSRGLE+LDMTPSSTCVTADTPDTADCYSA TTTVTLTDDVYVELTFNIGIWT+DGSTFYKSFTNTKVFGTTVVEYEFESFCYEN FLSQVF VTVLDTTYKYNFE
Sbjct:    2 KIVSVDGDYSEILDTSCGTSAVAVGSTVYELSGVGDLDSRGLELLDMTPSSTCVTADTPDTADCYSASTTTVTLTDDVYVELTFNIGIWTEDGSTFYKSFTNTKVFGTTVVEYEFESFCYENAFLSQVFFVTVLDTTYKYNFE 144          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: A0A6H5JBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT9_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 1.900e-40
Identity = 181/498 (36.35%), Postives = 232/498 (46.59%), Query Frame = 0
Query:   92 GLLLAAGRGGVSSQFTDGGAVDLSCGLCDCSGSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTC---VTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFES----FCYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGAASSSADAFICG-------------------------------EDLPAPTPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXXPAXXTAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTETPVGGGGDDL---------AATPSPTVLVLVNNTQAPSFDYEDED-ACILPESKPCTEATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVEKHPDE-DLPDYPDCPCCVLDIYEQDA 540
            GLLLA        ++ DGG V ++C  CDC GSSD  + VVF+NP++   +  V+G+YSE+++TSCG+SA+ VGSTVY LSGV D   R L V D++        V    P  ADCYS  +  + +      ELTF    W ++G    K  TN +      V+          C +    SQ+  V   D+++ Y F+  +PG  ++ DL VS   SS A A  C                                E+ P  TP+PVT  XXXXXXXXXXXXX                +  AA                   XX             XXXXXXXXXXXXXXXXXXXXX                     A TP PTV VL + T AP  + E E  AC  P   PCT  T FS+ N G+G YY+P C          GC    S LCR C+FN  +  E + D+ D+PDYP+CPCCV+D Y++ A
Sbjct:   67 GLLLAV----TGQEYIDGGDVSMACDECDCRGSSDSGTIVVFENPATESLVAKVEGEYSEVVETSCGSSAILVGSTVYELSGV-DFGGRSLGVADLSADDCAGDGVIPTAPSDADCYSGESP-IDVEGSTGAELTFCHCKW-NEGENVAKYATNVRASVKDYVDISVPDSGLVMCQDQGVFSQLVTVLADDSSFYYLFDLDVPGYESAEDLVVSSGPSSDAQALACSVDEEGXXXXXXXXXXXXXXXXXETPSPTTAVEEEPQTTPAPVTXXXXXXXXXXXXXXXSLQPDSSTAGQGATSSSTTAAPVEVDTPAPTPASRGLGTPXXSSAAVDAPPAPTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVTPGPTV-VLYSETLAPLTEEELEQVACTWPLDGPCTTETLFSDINRGLGAYYDPGCSGA-------GCGVGDSGLCRTCYFNLTMGEEGNDDDVDMPDYPECPCCVMDEYDRSA 549          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: A0A6H5J9W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W9_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 3.880e-30
Identity = 86/186 (46.24%), Postives = 110/186 (59.14%), Query Frame = 0
Query:  141 RIVSVDGDYSEILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFESF--CYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGAASSSADAFICGE--DLPAPTPSPV 322
            ++VSVDGD+SEI +TSCGTS +AVGSTVY LSG G L SR LE ++M+ S  C     P TA+CY+  T  + L  DV + LT  +  + D   T Y+S    +V G + V    +    C E  F+ Q+   TV    Y YNF+  +PG  +SSDLSVS A    A AFICGE  +L  PTPSPV
Sbjct:  144 QVVSVDGDHSEIAETSCGTSVMAVGSTVYELSGDGALGSRSLEAVEMSSSDDCSITGVPSTAECYTGDTA-MALDGDVSMALTICLCYYMDGSRTVYRSQVFAEVVGASAVSVPGDEIEICLEAGFIMQLTTATVEGEDYHYNFDLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELEEPTPSPV 328          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: D8LE45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE45_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 7.400e-23
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0
Query:  505 MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQR 547
            MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAF+LDGQR
Sbjct:    1 MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFSLDGQR 43          
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: D8LE44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE44_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.500e-15
Identity = 58/141 (41.13%), Postives = 78/141 (55.32%), Query Frame = 0
Query:  162 VAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFESF--CYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGA 300
            +AVGSTVY LSG G L SR LE ++M+ S  C     P TA+CY+  T  +TL  DV + LT  +  + D   T ++S    +V G + V    +    C E  F+ Q+   TV D  Y YNF+  +PG  +SSDLSVS A
Sbjct:    1 MAVGSTVYELSGDGALGSRSLEAVEMSSSDDCSITGVPSTAECYTGDTA-MTLDGDVSMTLTICLCYYMDGSKTIFRSQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVEDEDYYYNFDLVVPGRDSSSDLSVSAA 140          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5J9X3_9PHAE6.560e-23984.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE46_ECTSI2.370e-8395.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JBT9_9PHAE1.900e-4036.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9W9_9PHAE3.880e-3046.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE45_ECTSI7.400e-2397.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LE44_ECTSI2.500e-1541.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..599
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1403contigE-siliculosus-1a_F_contig1403:11163..22574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1403.2387.1mRNA_E-siliculosus-1a_F_contig1403.2387.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1403 11163..22574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1403.2387.1 ID=prot_E-siliculosus-1a_F_contig1403.2387.1|Name=mRNA_E-siliculosus-1a_F_contig1403.2387.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=600bp
VPLLPRTRNQNTNPTTHGLVAKHRRWQVFWAGLWWWWIMSPSSTSRRRRR
SRSGSPLRSEGAAGGAEQRQQRHPRSMMMSRRTEKMLALAAGLLLAAGRG
GVSSQFTDGGAVDLSCGLCDCSGSSDGVSFVVFDNPSSGERIVSVDGDYS
EILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPD
TADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTV
VEYEFESFCYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGA
ASSSADAFICGEDLPAPTPSPVTPSTPAPVTPPTEAPAKPPTEPPTAPAT
PAPTTAVAAAATPGPVAAVMPTAAPQAAAAAATAAPVLASPAPVVPPANN
ATAAPTLPAVGNVTTETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYED
EDACILPESKPCTEATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADAS
SLCRMCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCES
LTGGEERSGFSVLRVKLAPRRTVGQAIRETGYAWGGLPVGGVTWDTAYT*
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