|
|
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE) HSP 1 Score: 679 bits (1753), Expect = 6.560e-239 Identity = 409/482 (84.85%), Postives = 419/482 (86.93%), Query Frame = 1
Query: 277 LLLAAG---RGGVSSQFTDGGAVDLSCGLCDCSGSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFESFCYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGAASSSADAFICGEDLPAPTPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXXPAXXTAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYEDEDACILPESKPCTEATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCESLTGGEERSGFSVLRV-KLAPR 1710
L LAAG GGVSSQFTDGGAVDLSCGLCDC+GSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVY LSG GDLDSR LEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWT+DGSTFYKSFTNTKVFGTTVVEYEFESFCYENEFLSQVFLVTVL TTYKYNFEFALPGEPTSSDLSVSGAASSSA+AFICGEDLPA TPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXX XXTA+AAA XXXXXXXXXX XXXXXXXXX TETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYEDE ACILPESKPCTEATSFSNTNEGIGDYY+PACELVEGEEQLGGCNADASSLCRMCFFNTPLYV KHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRC S + + + V ++ PR
Sbjct: 49 LALAAGLVLAGGVSSQFTDGGAVDLSCGLCDCTGSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVYELSGAGDLDSRVLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTEDGSTFYKSFTNTKVFGTTVVEYEFESFCYENEFLSQVFLVTVLGTTYKYNFEFALPGEPTSSDLSVSGAASSSAEAFICGEDLPATTPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAAAAXXXXXXXXXXTEAPQAAAAATAAPVXXXXXXXXXPANTTTAAPTLPAVGNVM-TETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYEDEGACILPESKPCTEATSFSNTNEGIGDYYDPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVAKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCVSASPAPSSPALTEIPVGEITPR 529
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: D8LE46_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE46_ECTSI) HSP 1 Score: 266 bits (680), Expect = 2.370e-83 Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 1
Query: 421 RIVSVDGDYSEILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFESFCYENEFLSQVFLVTVLDTTYKYNFE 849
+IVSVDGDYSEILDTSCGTSAVAVGSTVY LSGVGDLDSRGLE+LDMTPSSTCVTADTPDTADCYSA TTTVTLTDDVYVELTFNIGIWT+DGSTFYKSFTNTKVFGTTVVEYEFESFCYEN FLSQVF VTVLDTTYKYNFE
Sbjct: 2 KIVSVDGDYSEILDTSCGTSAVAVGSTVYELSGVGDLDSRGLELLDMTPSSTCVTADTPDTADCYSASTTTVTLTDDVYVELTFNIGIWTEDGSTFYKSFTNTKVFGTTVVEYEFESFCYENAFLSQVFFVTVLDTTYKYNFE 144
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: A0A6H5JBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT9_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.900e-40 Identity = 181/498 (36.35%), Postives = 232/498 (46.59%), Query Frame = 1
Query: 274 GLLLAAGRGGVSSQFTDGGAVDLSCGLCDCSGSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTC---VTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFES----FCYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGAASSSADAFICG-------------------------------EDLPAPTPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXXPAXXTAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTETPVGGGGDDL---------AATPSPTVLVLVNNTQAPSFDYEDED-ACILPESKPCTEATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVEKHPDE-DLPDYPDCPCCVLDIYEQDA 1620
GLLLA ++ DGG V ++C CDC GSSD + VVF+NP++ + V+G+YSE+++TSCG+SA+ VGSTVY LSGV D R L V D++ V P ADCYS + + + ELTF W ++G K TN + V+ C + SQ+ V D+++ Y F+ +PG ++ DL VS SS A A C E+ P TP+PVT XXXXXXXXXXXXX + AA XX XXXXXXXXXXXXXXXXXXXXX A TP PTV VL + T AP + E E AC P PCT T FS+ N G+G YY+P C GC S LCR C+FN + E + D+ D+PDYP+CPCCV+D Y++ A
Sbjct: 67 GLLLAV----TGQEYIDGGDVSMACDECDCRGSSDSGTIVVFENPATESLVAKVEGEYSEVVETSCGSSAILVGSTVYELSGV-DFGGRSLGVADLSADDCAGDGVIPTAPSDADCYSGESP-IDVEGSTGAELTFCHCKW-NEGENVAKYATNVRASVKDYVDISVPDSGLVMCQDQGVFSQLVTVLADDSSFYYLFDLDVPGYESAEDLVVSSGPSSDAQALACSVDEEGXXXXXXXXXXXXXXXXXETPSPTTAVEEEPQTTPAPVTXXXXXXXXXXXXXXXSLQPDSSTAGQGATSSSTTAAPVEVDTPAPTPASRGLGTPXXSSAAVDAPPAPTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVTPGPTV-VLYSETLAPLTEEELEQVACTWPLDGPCTTETLFSDINRGLGAYYDPGCSGA-------GCGVGDSGLCRTCYFNLTMGEEGNDDDVDMPDYPECPCCVMDEYDRSA 549
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: A0A6H5J9W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W9_9PHAE) HSP 1 Score: 136 bits (343), Expect = 3.880e-30 Identity = 86/186 (46.24%), Postives = 110/186 (59.14%), Query Frame = 1
Query: 421 RIVSVDGDYSEILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFESF--CYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGAASSSADAFICGE--DLPAPTPSPV 966
++VSVDGD+SEI +TSCGTS +AVGSTVY LSG G L SR LE ++M+ S C P TA+CY+ T + L DV + LT + + D T Y+S +V G + V + C E F+ Q+ TV Y YNF+ +PG +SSDLSVS A A AFICGE +L PTPSPV
Sbjct: 144 QVVSVDGDHSEIAETSCGTSVMAVGSTVYELSGDGALGSRSLEAVEMSSSDDCSITGVPSTAECYTGDTA-MALDGDVSMALTICLCYYMDGSRTVYRSQVFAEVVGASAVSVPGDEIEICLEAGFIMQLTTATVEGEDYHYNFDLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELEEPTPSPV 328
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: D8LE45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE45_ECTSI) HSP 1 Score: 102 bits (254), Expect = 7.400e-23 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 1
Query: 1513 MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQR 1641
MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAF+LDGQR
Sbjct: 1 MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFSLDGQR 43
BLAST of mRNA_E-siliculosus-1a_F_contig1403.2387.1 vs. uniprot
Match: D8LE44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE44_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 2.500e-15 Identity = 58/141 (41.13%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 484 VAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTVVEYEFESF--CYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGA 900
+AVGSTVY LSG G L SR LE ++M+ S C P TA+CY+ T +TL DV + LT + + D T ++S +V G + V + C E F+ Q+ TV D Y YNF+ +PG +SSDLSVS A
Sbjct: 1 MAVGSTVYELSGDGALGSRSLEAVEMSSSDDCSITGVPSTAECYTGDTA-MTLDGDVSMTLTICLCYYMDGSKTIFRSQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVEDEDYYYNFDLVVPGRDSSSDLSVSAA 140
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Start | 0 |
| Stop | 1 |
| Cds size | 1800 |
| Model size | 1800 |
| Exons | 7 |
| Ec32 ortholog | Ec-05_004110.1 |
| Ec32 ortholog description | expressed unknown protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1403.2387.1 >prot_E-siliculosus-1a_F_contig1403.2387.1 ID=prot_E-siliculosus-1a_F_contig1403.2387.1|Name=mRNA_E-siliculosus-1a_F_contig1403.2387.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=600bp
VPLLPRTRNQNTNPTTHGLVAKHRRWQVFWAGLWWWWIMSPSSTSRRRRR SRSGSPLRSEGAAGGAEQRQQRHPRSMMMSRRTEKMLALAAGLLLAAGRG GVSSQFTDGGAVDLSCGLCDCSGSSDGVSFVVFDNPSSGERIVSVDGDYS EILDTSCGTSAVAVGSTVYALSGVGDLDSRGLEVLDMTPSSTCVTADTPD TADCYSAPTTTVTLTDDVYVELTFNIGIWTDDGSTFYKSFTNTKVFGTTV VEYEFESFCYENEFLSQVFLVTVLDTTYKYNFEFALPGEPTSSDLSVSGA ASSSADAFICGEDLPAPTPSPVTPSTPAPVTPPTEAPAKPPTEPPTAPAT PAPTTAVAAAATPGPVAAVMPTAAPQAAAAAATAAPVLASPAPVVPPANN ATAAPTLPAVGNVTTETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYED EDACILPESKPCTEATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADAS SLCRMCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCES LTGGEERSGFSVLRVKLAPRRTVGQAIRETGYAWGGLPVGGVTWDTAYT* back to topmRNA from alignment at E-siliculosus-1a_F_contig1403:11163..22574- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1403.2387.1 ID=mRNA_E-siliculosus-1a_F_contig1403.2387.1|Name=mRNA_E-siliculosus-1a_F_contig1403.2387.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11412bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1403:11163..22574- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) GTTCCCCTCCTTCCCCGAACCCGGAACCAGAACACCAACCCAACAACACA
CGGCCTGGTCGCCAAACACCGACGTTGGCAAGTGTTTTGGGCCGGCCTGT
GGTGGTGGTGGATCATGAGTCCATCGAGCACAAGCCGCAGACGAAGGAGA
AGTAGAAGCGGCAGCCCCCTGAGGAGCGAAGGAGCGGCGGGGGGGGCCGA
GCAGCGGCAGCAACGACATCCGCGAAGCATGATGATGAGTCGACGGACGG
AGAAGATGCTTGCGTTGGCAGCGGGCCTCTTGCTTGCGGCGGGAAGGGGA
GGGGTTAGCTCGCAGTTCACGGATGGCGGCGCCGTGGACCTGTCGTGCGG
GCTCTGCGACTGTAGCGGGAGCTCGGACGGCGTCTCCTTCGTGGTCTTCG
ACAACCCTTCCAGCGGGGAGCGGGTGAGAAGCCACCAGAAGAGGAAGAGG
ACAAAAGTCGGCACAGAGTTTTGAAACATATATATCCCCAAACCCGAAAC
AAACGGCCGGGGAAATGTATGGCGAGTTTTAAATTTTATTCCGAGATACT
TCCCGCGGTTGATTTGACTCATGAGTCTTGTAGTGGCTGTGGCTGCTGGT
TCGGAGCTCGCTCGCACCCACGTTTAGCAACAGAGCAACAGCAGTAGTAG
TGACAGCAGCACCGGTGGTTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GCAGGAGGAGGATTAAAACTCCGTGTGTTTGCGAACTGGAGAAACAACTT
GTGTGCCGCTGCTGCTGTGCAATCTGCGCGTTGTGGTGAAGCTTGAAACT
TTTGTATGCATCTTGGCATAGAATAAGGAATCAGGGGAGGAGGAGCAGCA
GTGGCTCGTCACTTTTCGAACCCTGGACACGAACCGCCACCAGAATGCAT
CATGGCATCATGGCACATCCGCACCCCTTCCCCCGAATGACAGCAGCCGC
CCGGGGAAAAATCACACCCCATCCCCTTGTGGTGGGACAATGCGCTGCGC
GTGGTACAGATGATGCTGTCGTGGGGCGAGAGAGAGGCCACATTATGCGC
GCACCTTGCTGCTTCAGAAACAATGTGGTGGGCAACTGGCCCACGTCTTT
GTTCCTCTCACAATCGACCAACCAACCAACCCGTCCGTTTCAAACCTCAA
ACCACACCACGCACCGCCCTTTCTGGTGTGCCCACAGCTGTTCGCAAAAC
ATTTCCTCAACACGGGGGCACGGGAACCTCCTGTGGTGCGTATCGTTTTC
TCGGGCTCAACATCTCGGGGAGGTGGTAGACTCGCGTCCTCCCCCCCCAC
CCGGCTCCCCACCGGCTCTCTTCTCAGCTGCTCCTTCCTCACCCTGAACG
GACGGGCTCCGATTCAACGTCCTCATTCAGCACATACACATTCATCTGCA
TTTGCTATGCACATGCACATACCGTAATTGTGCGTGTTATCGCACCCCCG
TGTTCGCGTTTTCGTGTAAGCCTTCTATATTTCTCCACAAAGTAGGAAGG
AGGGTGCGAACACCAACCGATACCTCTCAGGAAAGCCCTCGACGAGATGT
TTCCAAAACACCACCCTTTCCGGAGGCGATACCTCCCTGGGTGTGGTGAA
ATACGCTATTTACAAAAAACGCTAACACGGGGGGAGCCGGAGGTACCATC
TCTCCGACTCTTACGGTATGCACCCAGGGTTGAAAATGGATACAGGTCCA
CCTGCCTCTGTAGGGCAAATTAAGGACAGGGAATTACAGACGGCGATTGT
CAATTTTTCGCGGGCTGTGAAGCGAACACCAGGATTATCCACGCACGAAA
AATTTGCGATGCACTGCGCACACAAATGGAATCAAACTCTTCGGCAGCCT
GTTTCTTTTCGAAAATCCGCGTAAATTCACAGAAGGATATCCGTTGAGAC
ACGTATTACCACGGCAGTCGAAAGGGAGGTGCTGAAAGTCCTGTCAGTGA
GCGGAGGGAAAAACTGGGGTCAAATTAAGTCTGTTTAAACCTATACACTG
AATTTCACCAGTGCACCAGCTGGTGCTAAGTTCAAAGCATCATAGAAAAG
GAGGTAGATACATTTCACATCCCCTTGTAGTTCTCTCCTTGGGTCAAAGA
CGAAAATAGCAGACTATTCTTACTAAAGCCGTGCTGGAATGTACAGCGCT
ACCGACTGCTGAGTGCCATCGGCTGCTGCAAAAGCAAGCTACTTATTTTA
TTTTTTTTTCTTCGCTCAATGTCTGATGTATGCGTACAACGGTCGCACAA
CAGAGGTCAGTTACGGCAAATAGTACGTTAGGTATGCATACCTATCGCAA
CCTTTGGACTTACTGGGGTGGCTTCGAATGTCGGCACAGCCTGACTGCTG
CAATCAAATCGCATTGCAGCAAGGTTGCGATTCATCGCACAGATCGGGGT
CTCATCGCGCACGTACTGCTGTAGAAGTGTATTAGGCACAGCGGGGTGCG
ATAAAAAAAACACCTCTTTTCTTAGATACAGCAGTAGAGTCATGTTAGGA
AAAAAAAAAAAGCAAGAACCGCGTGATCGGGGCCATGACACCCGTGCTGT
GCCATGAGCCGCAACCGCCGTAGCAGTGCTGGCATATACCTGCACGCCGC
GTTTTTCATGGTGATCTATATGCATATCGTGCTATTGCAGCGTCGCTAAC
CGCAAGTGAGATATTGGACAAGATACCTGCTGAATGACAGATTCACAGCG
GTTTCCTTGGATCGGTTTACACGGCCACTCCAACCGACCGTCCGTCCTCG
CAGAGATCGCACGTACCTCGTGACTCCCATGACTGTGTCTTCTCCTTTAA
GGACTCCGTCACGAGGAGTCTTCGCATGCCATGATGAAATTCTGGATGGA
CGGATATAGCACCTTGCTGATGATGATGTTCCACAATTTGAACGGCTTGT
CCACCACATCAGCCCCGAAGTGCCTCATGTAGGCTCTGCGACATCCACAC
CCGTCTTTCCAACCTTGCCCCAGTTCCAACACACCATACACACCCTCCTC
CTGAGAATATCAAATCATCTCACCGCGAAAACATCAAACAAGTTATGCAG
GTCCTGCTCCTTCTTCACGCTATTGTACCAAGTCAAGGTTCTCTATGCAT
ATATCTGAGCCAGGGTTGACACGAAACGTGCCTGAGTGGGCAAAACCCTG
TTGTCCAGCGATGGTCTGGGCTGTCGCCTTGGCCGCTTGCGCCACGATGT
TTGCGACGCTGTTGGGTATTGTCGTCGGTGATTGGTGTTCCTTGGCTTGA
GGGTGATGGCTGGTTGCCGGTGGGTGGTAGGGCCAAGTTCGCGGAACAGG
CACTGGTGGAACGGAAGCGGGCCAGGATGTGCTACCACTATACGGATGTC
GAAATCGAGGACATTGGCGAAAAGCTCACCAAAGCGGGGTGTGGTCGCCC
TGATACGCCGTTTGGGCTAGCACAGCGGGCGATCGGCTTCGTAAAATTTC
AGGCCTTCCACTGAATATGTATCCCAAACGGCGATGTCCTCGATTTCGAC
ATTCGTATACAAAGTAGCACATCATGGCCCGTTCCCGTTCACCGGTGGCC
GGTTCCGCGAACGTGGCCCTACCACCCACCGGCAACCAGCCATCACCCTC
CAGCCAAGGACACCAATCACCGACGACAATACCCAACAGCATCGCGCACA
TGGTGGCGCAAGCGGCCAAGGCGACAGCCCAGGCCATCGCTGGATATCAG
GGCTTTGACGACGTGTCAACCCTGGCTCAGATATAGAGCTCTGCTTGGTA
GCGTGAAGAAGGAGCTGGACCTGTGTGTCTTGTTTGGTCTTTTTCGCGGT
GAGATGATTATGACTTCGTATTTTCAGGAGGAGGGTGTGTATGGTGTGTT
GGAACTGGGGTCAGAGGTCAAGGTTGGAAAGAGGGGTGTGGATGTAGCAG
AGCTTAGGACACTCTTTGGGGCTGATGTGGTGGACAAGTGTGGAACATCA
TCATCAGCAAGGTGCTACATCCGCCCATCCAGAGTTTGATCGTGGCATGC
GATAGTCTTCAGAAGGAGTGGAAAGAAGGGCACCTGCCTAACCTACCACA
TTGTACTCTGGTAGATACAGACGATCCAGCAGTAGATCGTGGCTGGAAGC
TGAGAGAAAGGGAGGAAAGCATTGCCGAAAGGCACCTAGATGGGTACAAA
TCCAGCGGGCAACAGCACGCCGTTGTCGCCATCCTGGGTCTCTTGGCGCT
CGACCAAACTCATCCTATTGCTCTGCTAGATGGTAGAGAGCAACGTTCTA
TCGTACGACAACGCCACAGGCTATGTATCCGCCTCGTGCACGTCACGTTG
TTGATCATGATGCAGCCACAGCTGATACATAGTCTACGGCGTGTGGTGCA
CCGGAGTACTGGTGCTGTTCGTCTGCCGGTGTGATCTGGTTGTATGTGGG
ACGTACATGTATCGGAGTCATCGCACAACGGGTGTGCGTCGAGATCACCC
AATGTCCCCACTGGGTGTTTCGTTCAGCACCGCACGTACTACTAGTGCTG
TCAAAATTCCGGGCGTCGACACTCATAGTAATCGACACGCCACCGCCCTC
AACGGTTGGTGTTGAGTCTGTGTACTATGTTATCCCAGGGACAGCCGATG
AAGAAAATGCAAATATGTTTCATGCATGAGCGTGTGTGTAAGGACACACA
TACACACGTAACAGCTTTCCTACAGCCCGGAAGCGCACCTGGATGCGGTC
TCTCGGTGGGGATGCGCTGGACCCTGAACCACATTCATTCAATGCCCAGA
TCGGGTATCGTACCCAAGTACCACAAACAGCCCCCCTAGTTAATACGACA
GACGATCTCGACATCTGTAACGAGTAATAAGCTGACCAATACATAGAAAT
GCCCCACTCGAGAGAAGAACATGTTCAACAAAACTGGCCACGCATTCAAC
ACAAAGCGTCGCCATCAGTTTACTCACGATGAATCCAACACATTCGTCTC
TGGCGATGATCTCAAGCCATCAACACGAAAGAGCCATCCTCAGGAAAAGT
ACCCAACAAGCGTCAGCGTCGGAACGGCGACGGACAATTCTGGAAAACAG
AGTACTGTAGACGCAAAATCTCGATCAAGATAACGTTCCAACCTCTTGGC
CAGAAGAACCAGGCATTCGGCAAGCACGGCGGTCTCACTTGAGCAAAACA
TTCATAATGTCATCATCAGCATTTCTGTGCCAAATCACGGGTACTTCTTC
TTCTTCGTTTTCGTGGGGAATGCTTCATACAAACACATATACCCTGTGTC
CTTCCTCCTGTGTGACGCCAGCCGTTTGGGTCCGGAAAACACGCCTACGT
GCACGTTCGTACCCGTAAGGATGATGCGAGATGACGCACGGGGGTGTATC
ATCAGCGATTTTCATAAAAAGCGTGATTTATGCACAAACCACGAGGGTGG
GGTATGTACCACTGCCGGCAAGGGTGGCTTTGGAAATATCACGTCGAGGG
CTTTTCCTGAGAGGTATGGGTTGGTGTTCGCACCCTCGTGGTTGTGGAGC
AATCATCAAGCTATGAAAACCACCACCAACACTCAGGCACGGACTCTGGC
ATCCTTCGGCACTTTTGCGTGTCACAAACTGACGTCGAAAGGATATAAGG
GACGAAGCACACAAAAACTACACGTACGCACGCAATGCTAGCCCGATTTT
TTGGACGGGATTGTTATTTTCTTGACCCCCCCCCCTCTTTGTAGGGATGC
GAGGTCAATGGTCTAACGATTACGGCATGCACGACTATGAGTGCACCCCC
CCCCCTCTCCCTCCTGTTTCTGGCTCATCCATCGTTGTGACGCATAGCCT
GGGCCGCCGAAATACCGGCGCATCGCTCCGTCCCGGCAACTGTAGGGACG
CTTTATGATCTAACGACTGTGTCACGCGTTTACATGAGTACAGCCCTCCC
CCCCCCCTCTGTGAGTTGTTTGCCCTTACTGAATCTACTGCTTGCCTCTC
GGTCCTGTTCACAGGCGCGTGTTCAATGGTCTAACAGCTAGGGCGTTGCG
AAACATGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCACCCCCCCTCCCCCACCCCCCCCCCCCCCCC
CCCCGCCCCCACCTCACNNNNNNNNNNCCCCCCGGCCCCTTTCACAGCCG
GGGGTTCAATGGTCTAACAGCTAGGGCGTTGCGAAACATCCCCCCCCCCC
CCCCCGCCCCCCGTCTACGGGTTCTAAAATCCTTGCGCGTGTCTCTTGGC
CCTGCTTCTCAGATTGTGTCCGTCGACGGGGATTACTCTGAGATCCTGGA
CACGAGCTGCGGGACGTCGGCCGTCGCTGTCGGCAGCACGGTCTACGCGC
TCAGCGGCGTGGGCGACTTGGACTCGAGGGGGCTGGAGGTGTTGGACATG
ACCCCGTCGAGCACGTGCGTCACGGCGGACACGCCTGACACGGCCGACTG
CTACAGGTGCGACGGGTCGCGAGGACTGCTGTTGAAAAGTGGTTTGTTTG
CTTGAAGGGTCGATCGTCCTCCCGCTGGCGGGAAGGGGTTGTGCTCGAGG
TGCCACCCTCTCGAAGGTGCTGTTTGTGGTGGCGGTGGTGGCAGTGAGAA
GGGTGCTCGAGATACCACTATCCCGAAGGCTTTGTTGCTTGCTTGTGGTG
GCGGTGAGAAGGGTACTCTAGATCCCACTCCCGAAGGTATATTTGTTTGT
TTCGTGGCACCTGCTGTACAGCCCCAGCGGGAGATGGGTTCCATTCTGCC
GGCCGCCGGAGGGATTGAAGGTTGGCGCCTTGAACCCAGTGCTGTTTTTG
GGGGTGTTGTTTTTCGTGTGTGTGTGTGTTTTTGTGTGTTTTTGTGTATT
GGGGAATCGTTCTGGCCTATTTGGTCTTGGTACCTCTTCTTCCTCGCCCC
TCAAGGTAACCAGCGAACGCAAATGGGGTACCATACTTTGGTATGAAGCC
ACCAAGCCACGAGGTTGAAGCAACATGCCCAGAAGAAGACCTCTTGTCTG
TTTGCTCTGCTGAGTAGTCGGGCTGTTTTTTTTTTTTTTTCTTGATACAG
CAAAACATTTCCATCTCTACCCATAGGCAAGGGTCTAGGATGTACTCCGT
GTATCGGTATTGAACTCATAGCGTTCGCGGGGCACCTTCTACCTTCTACC
AAGCAGCATACAAACGGCTCTGTACAGGGGATGTGGTATCTTACGCCCCC
CAAGGAACAAATACCGTAGGTTGCGTAAGGTGTCACACCCCTGGACCGAT
TTTCAATGCTCGATTGCGCCACGACGAACGGGATGCTGAAATCCAAGGAA
ACGTTGTCGGAAAGCTCTCGACGAGACGGTTCCAACGCCGCCATTTTCGG
CACCATCACGTATTTTCCTGCCCAGAAATCGAGCTTCGAAAATCGGTCCA
GGGGATGTGATATCTTACGCCCCCCAACAACTACATGTATGTTATATAGA
GGATTTTCATTGAAGTGTGTGCCGTGCTTGGCCCGTGGTGGTTGGCGAAG
CCGTCAGACTGCTTCCACGCGAAACTACCGCAAAAAACGCGAGTAGTCGC
TTAGCACCCCGAAGACCGACCTTCGTGTTGAATTGTTCTACAAGTATTGC
TCCCCTACGACCAAGGGGTTGTCAATGGCGACAAGGGTCGTTTGTTCGAG
ATGGGGTTCCGCGCGCGCATCGTCCGGTCGGTGTTTGGCACCCTCTTGGA
AGAATGTTTTATCCAGGATGTCGTGTGTTCTTTTTCTGATCCCTTGTTGT
CGTTGTTGCTGTACTTTTTTTTTGTATCCTCCTCTTGTATTTTTTTTTTT
TCTTTTCTCGTTTGTTTCCGTTTTTAGCGCCCCAACGACAACGGTCACCT
TGACCGATGACGTATACGTGGAGTTAACCTTCAACATCGGGATATGGACG
GACGACGGAAGCACCTTCTACAAGGTGTGTTCATTGAGTGTGCTCGGCAT
ACCGTAGGTTGCGTAATGTATCACACCCGCTGGACCGATTTTCAAGGCTC
GATTACTCCACGACGAAGAGGATACCGAAGTTAAAGCATACGTTTGCGGA
AAGCTCTCGACGAGACGGTTCCAACGCCGCCGTTTTTCGGCACCGTCGCT
GCTGTTGCTGCCGAGATATCGAGCTTCGAAAATTGGTCCGGGGGGTGTGA
TATCTTGTGTCATGCAACCTACGGTAGCAGTTGCGCACCGGCAGCAACAA
TACGGACAAGGACAAGGTGGTGTTGCATCTTTTTTCTTTCACGCCCGATA
CAGATGGAATTCAGGACTTTTTTGTTTTTTTGTATCTCGGTTGACTGTTC
GGTGCTTAGTACCAAGCACCTTTGTCGCCCGAAAATGCCCACCGAAAATA
CTCACACAAACGGCGGTGCCTTGAGCGCCATCCCGCTTATACCGTGGTAC
ATGCTCAATTTGCGGAACAATTTTTTGAGTGCCGCCTGTTTCTTTTGGGC
GCGTGTGATGTCCTCTTAACTTAACGCGCTCTGTCTGCCTGTGTATTTTG
CTTTGTGTTTCTCTCCCCCGCTTCTTATCGCCGTGAAATGGGATGGGATG
GGATGGGTTGGAATGGAATGGAATGGAATGGATGTGCCCCCAGTCGTTCA
CCAACACCAAGGTGTTCGGAACCACCGTGGTCGAGTACGAGTTCGAGAGC
TTCTGCTACGAGAACGAGTTCTTGTCCCAAGTCTTCTTGGTGACTGTTCT
GGTGAGTGGAAAGTTGGCGCCGAAGAGAGAATGAGAGAGAGAAAGAGTGA
GGATCAGGGGGTGTCGATCCGTGAGATCTTCCATTGGCCCGTTCGAAAGG
GACGAAGTTAATGCAGGATTACGAGAAAGTAGACCTTCTGAACACTTGTA
TTTGTGGTATAGTAGGTCCAGGAAGGATCGCCGGGACGAGCATCCTCGAG
CGAGTGACAAGCCCAATGAAGCAAACAAACCGAGGTTGGATAGAGAAAAA
CACACTGCAGGGTAATGATGCTATTCAAAGCATGGAAGCTACCGCAGCAA
GCCATGTTGCGTGGTGATGTCGAGTCTTCGCCTTGTCCTTTCGCAAGTGT
TACGTATTATCGTTCGTCTTTTGTTGTCTTGTCCTTTCCCCCCCCCCTCC
CGTCTTCCGCCCCCCCACTTGCCCTATCTCTCTACCTCTGCCTGCCGTCG
CCGCCGCCGCCGTCGTTCAACTCAACAACCCTTGGATCCTTCTGGGAATC
ATCATGGTGTGCGTATCCTCCCCGCAACCACACGTAGGACACGACGTACA
AGTACAACTTCGAGTTCGCCCTCCCGGGGGAGCCTACTTCGTCCGACCTG
TCCGTCTCGGGCGCCGCCTCCTCCAGCGCCGACGCCTTCATCTGCGGCGA
GGATCTCCCCGCGCCCACCCCGTCCCCGGTGACCCCGTCCACCCCGGCGC
CAGTCACCCCCCCGACGGAGGCCCCTGCGAAGCCCCCCACGGAGCCCCCC
ACCGCGCCGGCCACGCCCGCGCCGACGACCGCCGTCGCTGCTGCTGCGAC
CCCCGGCCCCGTCGCCGCGGTGATGCCTACGGCGGCGCCGCAAGCCGCGG
CGGCGGCGGCGACGGCGGCGCCCGTTTTGGCGTCGCCGGCGCCGGTTGTG
CCGCCGGCGAACAACGCCACTGCCGCGCCTACTCTCCCTGCCGTCGGGAA
TGTGACGACGGAGACCCCGGTCGGCGGCGGTGGTGATGATTTGGCGGCGA
CCCCGTCTCCCACCGTGCTGGTCTTGGTGAATAACACTCAGGCCCCGAGT
TTTGACTGTGAGTTTGTTTGCTGTTTTTTTTTGTGTTGTAGGTGATTTTT
TGGTAAGGTTGCTCTTGTTGCTAGGGGTTGTTCTGTAGGTGTGTGTGTGT
GTGTTTTTTTTTTCGTTCTCGTTGTTGGGTTGGTGTCGTCGAGTTGTGCA
AGTCAGTTTCTCTCGTTGTTTTATCTCGTGTGTTTTGGTTGGGCTCTTGT
TGTTGCTGCTGCTGACGTCGTCATTCGTGGGTAGTGTGGGTTCGTTGTGC
CCTCTGGCGGGTGGCTGACTGACGCGGTGCTCGTGGGAGAGATTGAGCGC
CCACCCCAGCGCCTGCAGAGAGAATGATCGTGTCACGCGTAAAAAACATG
GGTGGTGGGAAGGGGTGCAGGGGATGATAACGCCAAGCTCTTGCACCGGG
GGGGGGGGGGCAAGATGGGGTGTCCAGACCGTGTAAAAGACGCGTCCACT
TTGTGGCGCCCCTAGGTGGCTCGTTCTGTGCTGCCTGTCGTGTAGGAGAG
GTGTTGACACGGCGGTGGCCGGTTTCTGCCGTCTTCCGCCCCGCGCAGGG
CATGCGACAGTTTCCGAAATCGCACATGTGTGTACGAGACTCGTTGTTTT
GCTTGCTGCAAAGACATGCTTGGAAGTGCCGCACGAGAGTGTTTGCTTTC
GTCTCATTTTCTTTTTTCGTTCCGGAGTTCTGTTTTATATTTCCTGTCTG
TAAACGTGTCTGTCTTGTCTGTCTGTCTGTCTACGCTGCACCGGCCTTTC
ACGCCCCTCACGCTCTCGACGCTGCGCTGCACTGCTGGTGCCTAACCCTC
ATGCACGTGCAGACGAAGACGAAGACGCCTGCATCCTTCCGGAGAGCAAA
CCTTGCACGGAAGCGACGTCGTTTTCCAACACGAACGAAGGCATTGGGGA
CTATTACGAGCCGGCGTGCGAGCTCGTCGAGGGGGAAGAGCAACTGGGCG
GATGCAACGCCGGTGAGCCGCTATGGGTGTGCTGTCGGTTTGTGGGGGTT
TGTGCTCGTGGCGGGGTGAAGTAGTGTTGTTTGTTGCCATTGGCTTGTTG
GGATGTTATTGATGTTGCTGTCGCTGGACGATGGTTGGCGTTGGCATTGG
TTGGGTGTGTTACTGGTTGTTCGCTGCTGCCGTGGCTGCATGACGGTTTT
CGTTTCTCGTTTACTTGGTGAGATATGATGATGTTATGCGAGGTATTGTC
GTGCGGTCGCTCGATGGGTAGCGTGTGTGTGTGTGTGCTTCTTTATTGTT
AGCGTCGACCGCACTACCCAGTGACAATGCGTCAGTCTCAATGCGGTTAA
AAACACAAATTGAATCTGAAAGGTAATTAATGATGTGCGCATGTGCTTGC
GCAGACGCGTCGAGTCTCTGCCGCATGTGCTTCTTCAACACACCTCTCTA
CGTGGAGAAACACCCCGACGAGGACCTTCCAGACTACCCGGATTGCCCGT
GCTGCGTCCTGGACATTTACGAGCAAGACGCGTTCAACCTGGACGGCCAG
AGATGTGAGTCGCTCACCGGGGGGGAAGAACGAAGTGGGTTTTCCGTTTT
GCGTGTGAAGTTGGCTCCCCGTCGGACAGTGGGACAGGCTATCCGTGAGA
CGGGATACGCGTGGGGCGGGTTACCGGTGGGAGGGGTTACCTGGGATACG
GCATACACATGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1403:11163..22574- >mRNA_E-siliculosus-1a_F_contig1403.2387.1 ID=mRNA_E-siliculosus-1a_F_contig1403.2387.1|Name=mRNA_E-siliculosus-1a_F_contig1403.2387.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3600bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1403:11163..22574- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) GTTCCCCTCCTTCCCCGAACCCGGAACCAGAACACCAACCCAACAACACA CGGCCTGGTCGCCAAACACCGACGTTGGCAAGTGTTTTGGGCCGGCCTGT GGTGGTGGTGGATCATGAGTCCATCGAGCACAAGCCGCAGACGAAGGAGA AGTAGAAGCGGCAGCCCCCTGAGGAGCGAAGGAGCGGCGGGGGGGGCCGA GCAGCGGCAGCAACGACATCCGCGAAGCATGATGATGAGTCGACGGACGG AGAAGATGCTTGCGTTGGCAGCGGGCCTCTTGCTTGCGGCGGGAAGGGGA GGGGTTAGCTCGCAGTTCACGGATGGCGGCGCCGTGGACCTGTCGTGCGG GCTCTGCGACTGTAGCGGGAGCTCGGACGGCGTCTCCTTCGTGGTCTTCG ACAACCCTTCCAGCGGGGAGCGGGTTCCCCTCCTTCCCCGAACCCGGAAC CAGAACACCAACCCAACAACACACGGCCTGGTCGCCAAACACCGACGTTG GCAAGTGTTTTGGGCCGGCCTGTGGTGGTGGTGGATCATGAGTCCATCGA GCACAAGCCGCAGACGAAGGAGAAGTAGAAGCGGCAGCCCCCTGAGGAGC GAAGGAGCGGCGGGGGGGGCCGAGCAGCGGCAGCAACGACATCCGCGAAG CATGATGATGAGTCGACGGACGGAGAAGATGCTTGCGTTGGCAGCGGGCC TCTTGCTTGCGGCGGGAAGGGGAGGGGTTAGCTCGCAGTTCACGGATGGC GGCGCCGTGGACCTGTCGTGCGGGCTCTGCGACTGTAGCGGGAGCTCGGA CGGCGTCTCCTTCGTGGTCTTCGACAACCCTTCCAGCGGGGAGCGGATTG TGTCCGTCGACGGGGATTACTCTGAGATCCTGGACACGAGCTGCGGGACG TCGGCCGTCGCTGTCGGCAGCACGGTCTACGCGCTCAGCGGCGTGGGCGA CTTGGACTCGAGGGGGCTGGAGGTGTTGGACATGACCCCGTCGAGCACGT GCGTCACGGCGGACACGCCTGACACGGCCGACTGCTACAGATTGTGTCCG TCGACGGGGATTACTCTGAGATCCTGGACACGAGCTGCGGGACGTCGGCC GTCGCTGTCGGCAGCACGGTCTACGCGCTCAGCGGCGTGGGCGACTTGGA CTCGAGGGGGCTGGAGGTGTTGGACATGACCCCGTCGAGCACGTGCGTCA CGGCGGACACGCCTGACACGGCCGACTGCTACAGCGCCCCAACGACAACG GTCACCTTGACCGATGACGTATACGTGGAGTTAACCTTCAACATCGGGAT ATGGACGGACGACGGAAGCACCTTCTACAAGCGCCCCAACGACAACGGTC ACCTTGACCGATGACGTATACGTGGAGTTAACCTTCAACATCGGGATATG GACGGACGACGGAAGCACCTTCTACAAGTCGTTCACCAACACCAAGGTGT TCGGAACCACCGTGGTCGAGTACGAGTTCGAGAGCTTCTGCTACGAGAAC GAGTTCTTGTCCCAAGTCTTCTTGGTGACTGTTCTGTCGTTCACCAACAC CAAGGTGTTCGGAACCACCGTGGTCGAGTACGAGTTCGAGAGCTTCTGCT ACGAGAACGAGTTCTTGTCCCAAGTCTTCTTGGTGACTGTTCTGGACACG ACGTACAAGTACAACTTCGAGTTCGCCCTCCCGGGGGAGCCTACTTCGTC CGACCTGTCCGTCTCGGGCGCCGCCTCCTCCAGCGCCGACGCCTTCATCT GCGGCGAGGATCTCCCCGCGCCCACCCCGTCCCCGGTGACCCCGTCCACC CCGGCGCCAGTCACCCCCCCGACGGAGGCCCCTGCGAAGCCCCCCACGGA GCCCCCCACCGCGCCGGCCACGCCCGCGCCGACGACCGCCGTCGCTGCTG CTGCGACCCCCGGCCCCGTCGCCGCGGTGATGCCTACGGCGGCGCCGCAA GCCGCGGCGGCGGCGGCGACGGCGGCGCCCGTTTTGGCGTCGCCGGCGCC GGTTGTGCCGCCGGCGAACAACGCCACTGCCGCGCCTACTCTCCCTGCCG TCGGGAATGTGACGACGGAGACCCCGGTCGGCGGCGGTGGTGATGATTTG GCGGCGACCCCGTCTCCCACCGTGCTGGTCTTGGTGAATAACACTCAGGC CCCGAGTTTTGACTGACACGACGTACAAGTACAACTTCGAGTTCGCCCTC CCGGGGGAGCCTACTTCGTCCGACCTGTCCGTCTCGGGCGCCGCCTCCTC CAGCGCCGACGCCTTCATCTGCGGCGAGGATCTCCCCGCGCCCACCCCGT CCCCGGTGACCCCGTCCACCCCGGCGCCAGTCACCCCCCCGACGGAGGCC CCTGCGAAGCCCCCCACGGAGCCCCCCACCGCGCCGGCCACGCCCGCGCC GACGACCGCCGTCGCTGCTGCTGCGACCCCCGGCCCCGTCGCCGCGGTGA TGCCTACGGCGGCGCCGCAAGCCGCGGCGGCGGCGGCGACGGCGGCGCCC GTTTTGGCGTCGCCGGCGCCGGTTGTGCCGCCGGCGAACAACGCCACTGC CGCGCCTACTCTCCCTGCCGTCGGGAATGTGACGACGGAGACCCCGGTCG GCGGCGGTGGTGATGATTTGGCGGCGACCCCGTCTCCCACCGTGCTGGTC TTGGTGAATAACACTCAGGCCCCGAGTTTTGACTACGAAGACGAAGACGC CTGCATCCTTCCGGAGAGCAAACCTTGCACGGAAGCGACGTCGTTTTCCA ACACGAACGAAGGCATTGGGGACTATTACGAGCCGGCGTGCGAGCTCGTC GAGGGGGAAGAGCAACTGGGCGGATGCAACGCCGACGAAGACGAAGACGC CTGCATCCTTCCGGAGAGCAAACCTTGCACGGAAGCGACGTCGTTTTCCA ACACGAACGAAGGCATTGGGGACTATTACGAGCCGGCGTGCGAGCTCGTC GAGGGGGAAGAGCAACTGGGCGGATGCAACGCCGACGCGTCGAGTCTCTG CCGCATGTGCTTCTTCAACACACCTCTCTACGTGGAGAAACACCCCGACG AGGACCTTCCAGACTACCCGGATTGCCCGTGCTGCGTCCTGGACATTTAC GAGCAAGACGCGTTCAACCTGGACGGCCAGAGATGTGAGTCGCTCACCGG GGGGGAAGAACGAAGTGGGTTTTCCGTTTTGCGTGTGAAGTTGGCTCCCC GTCGGACAGTGGGACAGGCTATCCGTGAGACGGGATACGCGTGGGGCGGG TTACCGGTGGGAGGGGTTACCTGGGATACGGCATACACATGAACGCGTCG AGTCTCTGCCGCATGTGCTTCTTCAACACACCTCTCTACGTGGAGAAACA CCCCGACGAGGACCTTCCAGACTACCCGGATTGCCCGTGCTGCGTCCTGG ACATTTACGAGCAAGACGCGTTCAACCTGGACGGCCAGAGATGTGAGTCG CTCACCGGGGGGGAAGAACGAAGTGGGTTTTCCGTTTTGCGTGTGAAGTT GGCTCCCCGTCGGACAGTGGGACAGGCTATCCGTGAGACGGGATACGCGT GGGGCGGGTTACCGGTGGGAGGGGTTACCTGGGATACGGCATACACATGA back to top
|