prot_E-siliculosus-1a_F_contig1401.2378.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1401.2378.1
Unique Name	prot_E-siliculosus-1a_F_contig1401.2378.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	1422

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1401.2378.1 vs. uniprot
Match: D7FZT6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT6_ECTSI)

HSP 1 Score: 901 bits (2328), Expect = 5.010e-306
Identity = 995/1370 (72.63%), Postives = 999/1370 (72.92%), Query Frame = 0

Query:   55 MSRSQRHANGGGKGNADVAKYRDACPASRSDSEIVELVKRMGGDQAKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXXXXXYANGRGMDDRRGGRGGMADKMRGLRLDGDRGGYRGGXXXXXXXXXXSAPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXGWGASAKTPAAGSAWTGDGPAAXXXXXXXXXXXXXXPSASAVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMAHNGWSSSAQDPVAPGPVGSGSGSLGGXXXXXXXXXXXXXXXXXXXXXXAAAWAQSNLPATSAWSRGAATIINPKPKXXXXXXXAAAPAAPXXXXAXXXQXXXXXXXXXSAVAHPTLPVVASPGGEAVAATPPQTPRPQSSMPSVAETAAAAA-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-VPQQGDSXGGHGWQGQGSAYPGHHTSNAGXXGXXXXXXXXXXXXXXXXXXXXXXXXXSMQSQQYGYGST 1422
            MSRSQRHANGGGKGNADVAKYRDACPASRSDSEIVELVK+MGGDQAKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXXXXXYANGRGMDDRRGGRGGMADKMRGLRLDGDRGGYRGGXXXXXXXXXXSAPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX   GASAK PAAGSAWTGDGPAA    XXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMAHNGWSSSAQDPVAPGPVGSGSGSLGGXXXXXXXXXXXXXXXXXXXXXXAAAWAQSNLPATSAWSRGAATIINPKPK    XXX A        X XXX XXXXXXXXX   AHPTLPVVASPGGEAVAATPPQTPRPQ SMPSVAETAAAAA SPAIGS    V       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PS        PATAPGSQLHLQKAQAQEASAVSKPTAATGASAPGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPESQSQQTSTSVGTSAGNGWGATSGSAMGWGTKDTATSPVETPGTKPPGFSSTVTASPSVPVGAGPPPGLPPLGNVKQ VHELEAEMDSLN KPHSQFSQVSKAQSKLPAAQQPQVQ                                                                                                                                                                                     XXXXXXXXXRPARQQGGRGGYNSKPQYSNSGSLPQQ                                                                                     XXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGYAPTPPGMPAQVGYQYTPSGQAYGSIYYGQQGPVQSNPYQYGYPPHQYPPSASQYQQGGGGQRFPNMPRGYPATEYGSQGGMGMGYGQMDYSASSQYGVPP GNGYMSDVGKEQYGDFGQDQFGMPQQMSGQGGXXXXXXXXXXXXXXXXXXXXXXX              L+  S T      S +          +   XXXXXXXXXXXXXXXXXXVNSHYXXXXXXXXX NSQGSRQAQGM XXXXXXX VPQQGDS GGHGWQGQGSAYPGHHTSNAGXX XXXXXXXXXXXXXXXXXXXXXXXXXSMQSQQYGYGST
Sbjct:    1 MSRSQRHANGGGKGNADVAKYRDACPASRSDSEIVELVKKMGGDQAKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXXXXXYANGRGMDDRRGGRGGMADKMRGLRLDGDRGGYRGGXXXXXXXXXXSAPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GASAKAPAAGSAWTGDGPAAVSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMAHNGWSSSAQDPVAPGPVGSGSGSLGGXXXXXXXXXXXXXXXXXXXXXXAAAWAQSNLPATSAWSRGAATIINPKPKPVPVXXXVAX-------XXXXXXXXXXXXXXXXXAAHPTLPVVASPGGEAVAATPPQTPRPQGSMPSVAETAAAAAASPAIGSXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAPSPVTAAVVTPATAPGSQLHLQKAQAQEASAVSKPTAATGASAPGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPESQSQQTSTSVGTSAGNGWGATSGSAMGWGTKDTATSPVETPGTKPPGFSSTVTASPSVPVGAGPPPGLPPLGNVKQ-VHELEAEMDSLN-KPHSQFSQVSKAQSKLPAAQQPQVQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXRPARQQGGRGGYNSKPQYSNSGSLPQQ-------------------------------------------------------------------------------------XXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGYAPTPPGMPAQVGYQYTPSGQAYGSIYYGQQGPVQSNPYQYGYPPHQYPPSASQYQQGGGGQRFPNMPRGYPATEYGSQGGMGMGYGQMDYSASSQYGVPPNGNGYMSDVGKEQYGDFGQDQFGMPQQMSGQGGXXXXXXXXXXXXXXXXXXXXXXXGV------------LAEASLTRFPRARSFS----------AXXXXXXXXXXXXXXXXXXXXXVNSHYXXXXXXXXXXNSQGSRQAQGMXXXXXXXXXVPQQGDSQGGHGWQGQGSAYPGHHTSNAGXX-XXXXXXXXXXXXXXXXXXXXXXXXXSMQSQQYGYGST 1070

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1401.2378.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1401.2378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FZT6_ECTSI	5.010e-306	72.63	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 710..730
None	No IPR available	PANTHER	PTHR24145	FAMILY NOT NAMED	coord: 356..933

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1401	contig	E-siliculosus-1a_F_contig1401:15950..29749 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1401.2378.1	mRNA_E-siliculosus-1a_F_contig1401.2378.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1401 15950..29751 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1401.2378.1 ID=prot_E-siliculosus-1a_F_contig1401.2378.1|Name=mRNA_E-siliculosus-1a_F_contig1401.2378.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1422bp
VGLQAGPKLNQPQGKYTLASVTALADPEGPPTLVCSTRELSCKETTRGSG
RTDAMSRSQRHANGGGKGNADVAKYRDACPASRSDSEIVELVKRMGGDQA
KIQSALEDWWQNDQGEWATATTKKKKQTAPQHHHHPRGGGGGYANGRGMD
DRRGGRGGMADKMRGLRLDGDRGGYRGGGGGGGRGRGRSAPPAGGRGGGG
GRGSGGSHHSGGWGGAPAPSGGGGGGGGGAWNGSSRSSSIPPQAANASTE
SSGGWGASAKTPAAGSAWTGDGPAAVTEAAAADAGTDSSPSASAVPAASG
GGGWAAAVGGSAPTSSPGPSAAAAAASGGSSGWSGGSGAAAAAGSSSSSQ
APMAHNGWSSSAQDPVAPGPVGSGSGSLGGAAAAAGGAAAGAPQPPPPKE
EDAAAWAQSNLPATSAWSRGAATIINPKPKPVPVPPPAAAPAAPPAPAAP
AAQPVAQPAPAPSAVAHPTLPVVASPGGEAVAATPPQTPRPQSSMPSVAE
TAAAAASPAIGSPAVAVSSPSPVARPAVSAAAVAVTAPVQVASDSAAVAA
AAAVAAAPSPVTAAAVTPATAPGSQLHLQKAQAQEASAVSKPTAATGASA
PGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPESQSQQTSTSVG
TSAGNGWGATSGSAMGWGTKDTATSPVETPGTKPPGFSSTVTASPSVPVG
AGPPPGLPPLGNVKQQVHELEAEMDSLNNKPHSQFSQVSKAQSKLPAAQQ
PQVQPQQSQQQQPVQQTSQTQTTSRPQRTTSRDLPQQQQQQQQQQQQPRQ
SQPAATATQQAQPPAPQAAAAATSVTQPPAPSQQTPQPSSQQQQQQQQVP
SSASSSSLGHQGGHSQQHGQQQHQQHQPQQHQQHVPSSSPSSVSTAPPVQ
QHQHQHQHQPQHQQAHSQQQPQQQHQQQQQHHQSQQAHSQQQHQRPARQQ
GGRGGYNSKPQYSNSGSLPQQGGNSNSSSNFYGSSNSNSNSSSGLSSSAK
PAPGGVYSAPTPTSTHSGGGSGHGSSSHGSPGTASTAASKTLYGGGGGGG
GGGGGQQTGSGGGGSSSGGVSGTGGPGGMGGMQQGQQAPQQAPPPQQQQG
YAPTPPGMPAQVGYQYTPSGQAYGSIYYGQQGPVQSNPYQYGYPPHQYPP
SASQYQQGGGGQRFPNMPRGYPATEYGSQGGMGMGYGQMDYSASSQYGVP
PTGNGYMSDVGKEQYGDFGQDQFGMPQQMSGQGGGGGGGSGGTSGGAGGA
GSGGAGGGSGASGSSGLGGPSLSAVSTTAVSGGGSVAGSVSDKASSGSQL
SGGAAGGGSGGSGSGSGGGVNSHYGGGGGGGGGHNSQGSRQAQGMYGGGG
QGSVPQQGDSQGGHGWQGQGSAYPGHHTSNAGGWGGGAGMMPPGGPQHHY
QQQSPPPPGGSMQSQQYGYGST