prot_E-siliculosus-1a_F_contig140.2362.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig140.2362.1
Unique Nameprot_E-siliculosus-1a_F_contig140.2362.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length53
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: D7FX14_ECTSI (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX14_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 3.480e-25
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSKK 52
            M IRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSKK
Sbjct:  186 MHIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSKK 237          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: A0A6H5JGP1_9PHAE (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 5.010e-25
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSKK 52
            MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVD VIKLSKK
Sbjct:  187 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDTVIKLSKK 238          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: A0A7S2CF89_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CF89_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.260e-18
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSK 51
            MRI++N+VRMYA MTGQTQEQI IDLDRDNFMSAQ A +YGLVD VI+LS+
Sbjct:  212 MRIKENLVRMYAQMTGQTQEQIIIDLDRDNFMSAQQAMEYGLVDQVIELSE 262          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: A0A7S2NSD7_9STRA (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSD7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.360e-17
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSKK 52
            MRIRDNIV+MY+MM+GQTQEQIT DLDRDNFMSAQ A +YGLVD V+++ ++
Sbjct:  229 MRIRDNIVKMYSMMSGQTQEQITTDLDRDNFMSAQQALEYGLVDRVVEMPRE 280          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: A0A7S0ACV0_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ACV0_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.150e-17
Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIK 48
            MRIRDNIV+MY+MMTGQT EQIT DLDRDNF+SAQ A DYGL+D +++
Sbjct:   89 MRIRDNIVKMYSMMTGQTTEQITKDLDRDNFLSAQEAVDYGLIDRILE 136          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: A0A7S0KYD1_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KYD1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.970e-17
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSKK 52
            MRIRDN+V+MY+M TGQTQ+QIT DLDRDNFMSAQ A +YGL+D V++ SK+
Sbjct:  209 MRIRDNLVKMYSMFTGQTQDQITRDLDRDNFMSAQEAVEYGLIDRVLEYSKE 260          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: A0A1Z5J5M6_FISSO (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5M6_FISSO)

HSP 1 Score: 79.0 bits (193), Expect = 2.130e-16
Identity = 36/52 (69.23%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSKK 52
            MRIRDN+V+MY+MMTGQTQ+QI  DLDRDNFMSAQ A +YGL+D V++ +K+
Sbjct:  209 MRIRDNLVKMYSMMTGQTQDQIIKDLDRDNFMSAQEALEYGLIDRVLEYNKQ 260          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: A0A7S4N7H3_9STRA (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7H3_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.180e-16
Identity = 36/52 (69.23%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLSKK 52
            MRIRDN+V+MY+MM+GQT EQIT DLDRDNFMSAQ A +YGL+D V++++K+
Sbjct:  209 MRIRDNLVKMYSMMSGQTTEQITKDLDRDNFMSAQDAMEYGLIDRVLEVAKE 260          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: F0YKH8_AURAN (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YKH8_AURAN)

HSP 1 Score: 77.4 bits (189), Expect = 2.720e-16
Identity = 34/49 (69.39%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    2 RIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLS 50
            RI++N+V++YAMMTGQTQ+QI +DLDRDNFMSAQ A DYG++D VI +S
Sbjct:  148 RIKENLVKLYAMMTGQTQDQIILDLDRDNFMSAQEACDYGIIDKVIPVS 196          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Match: A0A7S2N232_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N232_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.780e-16
Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKL 49
            MRIRDN+V+MYAMMTGQTQ+QI  DLDRDNF+SAQ A +YGLVD V+++
Sbjct:  199 MRIRDNLVKMYAMMTGQTQDQIISDLDRDNFLSAQEAMEYGLVDRVLEI 247          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig140.2362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX14_ECTSI3.480e-2598.08ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A6H5JGP1_9PHAE5.010e-2598.08ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S2CF89_9STRA7.260e-1878.43ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S2NSD7_9STRA1.360e-1773.08ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A7S0ACV0_9STRA2.150e-1775.00ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S0KYD1_9STRA3.970e-1771.15ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A1Z5J5M6_FISSO2.130e-1669.23ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A7S4N7H3_9STRA2.180e-1669.23ATP-dependent Clp protease proteolytic subunit n=2... [more]
F0YKH8_AURAN2.720e-1669.39ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A7S2N232_9STRA3.780e-1673.47ATP-dependent Clp protease proteolytic subunit n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 1..48
e-value: 3.4E-14
score: 53.1
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 1..48
NoneNo IPR availableGENE3D3.90.226.10coord: 1..51
e-value: 2.5E-11
score: 45.6
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 2..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig140contigE-siliculosus-1a_F_contig140:53..1056 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig140.2362.1mRNA_E-siliculosus-1a_F_contig140.2362.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig140 32..1056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig140.2362.1 ID=prot_E-siliculosus-1a_F_contig140.2362.1|Name=mRNA_E-siliculosus-1a_F_contig140.2362.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=53bp
MRIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIKLS
KK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom_sf
IPR023562ClpP/TepA