prot_E-siliculosus-1a_F_contig13966.2341.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13966.2341.1
Unique Nameprot_E-siliculosus-1a_F_contig13966.2341.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length57
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig13966.2341.1 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 3.120e-20
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:   14 RMANEGRWTDNGQPLTLAEGRTVMPMLDQAEQAIVARLLPSHAL 57
            RMANEGRWTDNGQPLTLAEGRTVMPMLDQAEQAIVARLLPSHAL
Sbjct:   54 RMANEGRWTDNGQPLTLAEGRTVMPMLDQAEQAIVARLLPSHAL 97
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BLAST of mRNA_E-siliculosus-1a_F_contig13966.2341.1 vs. uniprot
Match: D7G3W3_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W3_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 4.720e-13
Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:   14 RMANEGRWTDNGQPLTLAEGRTVMPMLDQAEQAIVARLLPSHAL 57
            RM N GRWTDNGQPL LAEGRTV+PML Q +QA  A LLPSHAL
Sbjct:  383 RMPNGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHAL 426
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13966.2341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8R1_9PHAE3.120e-20100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3W3_ECTSI4.720e-1377.27HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13966contigE-siliculosus-1a_F_contig13966:199..369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13966.2341.1mRNA_E-siliculosus-1a_F_contig13966.2341.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13966 199..371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13966.2341.1 ID=prot_E-siliculosus-1a_F_contig13966.2341.1|Name=mRNA_E-siliculosus-1a_F_contig13966.2341.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=57bp
AAGGVVAAGGGGGRMANEGRWTDNGQPLTLAEGRTVMPMLDQAEQAIVAR
LLPSHAL
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