prot_E-siliculosus-1a_F_contig1396.2339.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1396.2339.1
Unique Nameprot_E-siliculosus-1a_F_contig1396.2339.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length318
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1396.2339.1 vs. uniprot
Match: D7FJ24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ24_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 1.710e-157
Identity = 276/317 (87.07%), Postives = 281/317 (88.64%), Query Frame = 0 
Query:    1 MVERSAHDMGLADLRELMLDLAAASLDEEVNGSCETETCRALVAVVDAMPAREYGDAFSSLVSGLCDPSARGLESRMTTFTWPLLARNVPFKRSSSSPSHGSSGHGVXXXXXXXXXXXXVTIAADGVGITVAAAAATSAAVPSLSHEVCHRLLKERFLKDTSYVDAEESPEGLGRALKALDVLLENEDDVLESETQEGYKRQYVVVALANEMAAGSMAVSRTVKPDGDECRKMVRLLEGINRELTSVMQNSVQMSKTLLDLMKSKYTPFLPASSGVQSKLSFGGKTVTSFGGENSXXXXXXXXXXXXXXXXXETESQ 317
            MVERSAHDMGLADLRELMLDLAAASLDEEVNGSCETETCRALVAVVDAMPAREYGDAFSSLV+GLCDPSARGLESR+TTFTWPLLARNVPFKRSS            XXXXXXXXXXXX                     VPSLSHEVCHRLLKERFLKDTSY DAEESP+GLGRALKALDVLLENEDDVLESETQEGYKRQYVVVALANEMAAGSMAVSRT KPDGDEC+KMVRLLE INRELTSVMQNSVQMSKTLLDLMKSKYTPFLPASSGVQSKLSFGGKTVTSFGGE+SXXXXXXXXXXXXXXXXXETESQ
Sbjct:    1 MVERSAHDMGLADLRELMLDLAAASLDEEVNGSCETETCRALVAVVDAMPAREYGDAFSSLVAGLCDPSARGLESRVTTFTWPLLARNVPFKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPSLSHEVCHRLLKERFLKDTSYADAEESPQGLGRALKALDVLLENEDDVLESETQEGYKRQYVVVALANEMAAGSMAVSRTAKPDGDECKKMVRLLEAINRELTSVMQNSVQMSKTLLDLMKSKYTPFLPASSGVQSKLSFGGKTVTSFGGEDSXXXXXXXXXXXXXXXXXETESQ 317
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1396.2339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ24_ECTSI1.710e-15787.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1396contigE-siliculosus-1a_F_contig1396:4156..8561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1396.2339.1mRNA_E-siliculosus-1a_F_contig1396.2339.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1396 4156..9882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1396.2339.1 ID=prot_E-siliculosus-1a_F_contig1396.2339.1|Name=mRNA_E-siliculosus-1a_F_contig1396.2339.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=318bp
MVERSAHDMGLADLRELMLDLAAASLDEEVNGSCETETCRALVAVVDAMP
AREYGDAFSSLVSGLCDPSARGLESRMTTFTWPLLARNVPFKRSSSSPSH
GSSGHGVVVGGGEGGNNNNVTIAADGVGITVAAAAATSAAVPSLSHEVCH
RLLKERFLKDTSYVDAEESPEGLGRALKALDVLLENEDDVLESETQEGYK
RQYVVVALANEMAAGSMAVSRTVKPDGDECRKMVRLLEGINRELTSVMQN
SVQMSKTLLDLMKSKYTPFLPASSGVQSKLSFGGKTVTSFGGENSSDDDD
DDDDDDEEEEDDETESQ*
back to top