prot_E-siliculosus-1a_F_contig1394.2334.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1394.2334.1
Unique Nameprot_E-siliculosus-1a_F_contig1394.2334.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length319
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 1.100e-130
Identity = 199/221 (90.05%), Postives = 199/221 (90.05%), Query Frame = 0
Query:   98 MSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 318
            MSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR                      VESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC
Sbjct:    1 MSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRE---------------------VESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 200          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: D8LEW7_ECTSI (Rab22, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW7_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 4.060e-87
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query:   98 MSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 231
            MSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR
Sbjct:    1 MSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 134          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA)

HSP 1 Score: 241 bits (615), Expect = 2.330e-76
Identity = 130/215 (60.47%), Postives = 158/215 (73.49%), Query Frame = 0
Query:  105 DSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSS-GASSSCC 318
            D R+REVKVVLLGDTGVGKSSLV RF+TN FK Y ESTIGASFMSK+IMVDGSP+KFQIWDTAGQEKYHSLAPMYY+GA AAIVVYDITK  +F+TLK+W+ EL++QGP++I IAVAGNK DLES+R                      V+++ AQ+YA  IGA F+ETSAK   +V ++F  +SK+LP++E         LNL +  G+S  CC
Sbjct:    6 DQRAREVKVVLLGDTGVGKSSLVLRFITNEFKQYQESTIGASFMSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESERE---------------------VDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNK-LNLKAGKGSSGGCC 198          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA)

HSP 1 Score: 240 bits (612), Expect = 6.610e-76
Identity = 122/187 (65.24%), Postives = 146/187 (78.07%), Query Frame = 0
Query:  107 RSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 293
            ++REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMIMV+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP++I IA+AGNK DLE +R                      V S+ A+AYADEIGA+F+ETSAK+ T+V D+F+ +SK+LP
Sbjct:    7 KAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKRE---------------------VPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLP 172          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT)

HSP 1 Score: 235 bits (599), Expect = 6.540e-74
Identity = 128/218 (58.72%), Postives = 155/218 (71.10%), Query Frame = 0
Query:  105 DSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP----KREPLPPASGVDLNLDSSGASSSCC 318
            +S++REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DLE +R                      V +S A+AYA EIGA+F+ETSAK+ T+V D+F+++S+ LP    +   LP    VD        SS CC
Sbjct:    6 NSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKRE---------------------VPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESNALPEI--VDPYGGGKKKSSGCC 200          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD)

HSP 1 Score: 233 bits (593), Expect = 5.110e-73
Identity = 119/188 (63.30%), Postives = 145/188 (77.13%), Query Frame = 0
Query:  106 SRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 293
            S++REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DLE +R                      V +S A+AYA+EIGA+F+ETSAK+  +V D+F+++S+ LP
Sbjct:    6 SKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKRE---------------------VPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 172          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC)

HSP 1 Score: 227 bits (578), Expect = 8.840e-71
Identity = 117/187 (62.57%), Postives = 141/187 (75.40%), Query Frame = 0
Query:  107 RSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 293
            ++REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S +TLK W+ EL+  GP +I IA+AGNK DL+ +R                      V S  A+AYADEIGA+F+ETSAK+ T+V D+F  +S++LP
Sbjct:    6 KAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKRE---------------------VSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLP 171          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.350e-69
Identity = 117/190 (61.58%), Postives = 142/190 (74.74%), Query Frame = 0
Query:  104 MDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 293
            M + +REVKVVLLGDTGVGKSSLV RFVTNNFKPYSESTIGASFM+KM+++D +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  SF TLK W+ EL+  GP+DI IA+AGNK DL  QR                      VE   A+ YA  IGA+++ETSAK  ++V+ +FV+++ RLP
Sbjct:   85 MAAEAREVKVVLLGDTGVGKSSLVLRFVTNNFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQRE---------------------VEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLP 253          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA)

HSP 1 Score: 226 bits (575), Expect = 8.720e-68
Identity = 120/200 (60.00%), Postives = 148/200 (74.00%), Query Frame = 0
Query:   94 ISSRMSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 293
            +++ MS  G+   ++REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DL+ +R                      V S+ A+AYADEIGA+F+ETSAK+ T+V D+F  +S++LP
Sbjct:  188 LATNMSADGT---KAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKRE---------------------VSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLP 363          
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Match: F0Y0I1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0I1_AURAN)

HSP 1 Score: 219 bits (558), Expect = 9.590e-68
Identity = 117/211 (55.45%), Postives = 141/211 (66.82%), Query Frame = 0
Query:  107 RSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVFCLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSC 317
            R+RE KVVLLGDTGVGKSSL  R+VTN FKPYSESTIGASFMSKMI+VDG+P K QIWDTAGQEKYHSLAPMYYRGA AAI+V+DITK  S   LK W+ ELQ QGP+ +A+A+AGNK DL  +R                      V +  A+A+A +IGA++ ETSAKD T+V  +F +L +R P           DL  D++     C
Sbjct:    7 RTRECKVVLLGDTGVGKSSLAQRYVTNTFKPYSESTIGASFMSKMILVDGAPCKCQIWDTAGQEKYHSLAPMYYRGAAAAILVFDITKPASLDKLKAWVRELQTQGPERLALAIAGNKADLADRRA---------------------VPADDAKAFAADIGALYCETSAKDDTNVSQLFADLVRRAPAGGAARTDDAFDLGHDAAPRRGCC 196          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1394.2334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE80_9PHAE1.100e-13090.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEW7_ECTSI4.060e-87100.00Rab22, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A7S2SUM8_9STRA2.330e-7660.47Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0WNT1_9STRA6.610e-7665.24Rab5 family GTPase putative n=3 Tax=Albugo TaxID=6... [more]
D0N0I0_PHYIT6.540e-7458.72Rab5 family GTPase, putative n=2 Tax=Phytophthora ... [more]
K3X978_GLOUD5.110e-7363.30Uncharacterized protein n=22 Tax=Oomycota TaxID=47... [more]
A0A067CI89_SAPPC8.840e-7162.57Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A7S1CIP5_9STRA1.350e-6961.58Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A3R7AA57_9STRA8.720e-6860.00Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
F0Y0I1_AURAN9.590e-6855.45Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 134..150
score: 30.04
coord: 152..174
score: 47.9
coord: 214..227
score: 39.59
coord: 270..292
score: 35.63
coord: 111..132
score: 48.92
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 111..295
e-value: 7.6E-64
score: 228.1
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 113..290
e-value: 2.5E-9
score: 0.5
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 116..306
e-value: 4.5E-5
score: 23.1
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 108..295
e-value: 3.4E-21
score: 86.4
NoneNo IPR availableGENE3D3.40.50.300coord: 105..305
e-value: 1.3E-59
score: 202.9
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 106..231
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 106..231
NoneNo IPR availablePROSITEPS51419RABcoord: 106..318
score: 30.656
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 109..238
e-value: 7.4E-26
score: 88.8
IPR001806Small GTPasePFAMPF00071Rascoord: 112..292
e-value: 7.2E-52
score: 175.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 107..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1394contigE-siliculosus-1a_F_contig1394:23385..27781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1394.2334.1mRNA_E-siliculosus-1a_F_contig1394.2334.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1394 23385..27781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1394.2334.1 ID=prot_E-siliculosus-1a_F_contig1394.2334.1|Name=mRNA_E-siliculosus-1a_F_contig1394.2334.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=319bp
TTTAARDSNNSGAKDYHRPGYIPAPATAVLTEVSRDFGRQRGHSGIRTQF
SKIVALLYLVLQPGAAAGKRARDPKSLRPLLVPRASEREREREISSRMSR
RGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSK
MIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRT
LKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLKFLLWLKIPSFVF
CLCVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPP
ASGVDLNLDSSGASSSCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom