prot_E-siliculosus-1a_F_contig13809.2267.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13809.2267.1
Unique Nameprot_E-siliculosus-1a_F_contig13809.2267.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length88
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 5.820e-44
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTPERIDDD 87
            MDWFVEEVADYEPN LDARKTTPAVQAGRKLG RHLQ LLKAVGRDCLRGTNTPDEKVKVLVGIILPEAER+VGSTSHGT ER++ D
Sbjct:  857 MDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRERLNHD 943          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: A0A6H5KC16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC16_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 8.030e-44
Identity = 76/87 (87.36%), Postives = 79/87 (90.80%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTPERIDDD 87
            MDWFVEEVADYEPN LD RKTTPAVQAGRKLGKRHLQI+LKAVGRDCLRGTNT DEKVKVLVGI+LPEA RKVG TSHGT ER + D
Sbjct:   62 MDWFVEEVADYEPNNLDTRKTTPAVQAGRKLGKRHLQIILKAVGRDCLRGTNTADEKVKVLVGIVLPEAGRKVGLTSHGTQERANHD 148          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.060e-43
Identity = 80/87 (91.95%), Postives = 81/87 (93.10%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTPERIDDD 87
            MDWFVEEVADYEPNKLDARKTT AVQAGRKLG RHLQ LLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGT ER + D
Sbjct:  672 MDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHD 758          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 1.120e-41
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTPERIDDD 87
            MDWFVEEVADYEPN +DARKTT AVQAGRKLGKRHLQ LLKAVGRDCLRGTNTPDEKVKVLVGIILPEAER+VGSTSH T ER + D
Sbjct:  645 MDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHD 731          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: D7FHJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ4_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 4.300e-16
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 MDWFVEEVAD-YEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRGTNTPDEKVKVLVGIILPEA 69
            MDWFV+ +++ YEP        T  ++AG++LG+RHL++LL AVGR CL GTN P EKV  LV +ILPEA
Sbjct:    1 MDWFVDWISEHYEPGNCGTTTETRELKAGKRLGRRHLRMLLTAVGRGCLEGTNNPREKVDALVQVILPEA 70          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.360e-15
Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGST 76
            M+WF +EV+++EP    A + TP  QAG +LGK+HLQ LL AVG  CL G N  +EKV++LV  + PE E    ST
Sbjct:  976 MEWFADEVSNFEPQHRHATRMTPEEQAGSRLGKKHLQTLLLAVGTGCLEGANNIEEKVELLVRTVFPEDEGNAVST 1051          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 6.260e-15
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGST 76
            M+WF +EVA+ EP    A +TTP  QAGR+LGK+HLQ LL AVG   L G  + +EKV++LV  +LPE E    ST
Sbjct:  949 MEWFADEVANLEPQDHHATRTTPEEQAGRRLGKKHLQTLLLAVGNGRLEGAKSIEEKVELLVRTVLPEDEGNAVST 1024          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: D7G8A7_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A7_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 3.520e-13
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTPERIDDDP 88
            M+WF EE A   PN  +  K+TP  + GR+LGKRH++++L AV R CL+GT+  +EKV+ L+ +++PEA  K  S S+      +  P
Sbjct:  483 MEWFAEEAASCVPN--NTGKSTPEEKTGRRLGKRHIRMILAAVERGCLQGTHAIEEKVEQLLKVVVPEAGAKPVSNSNAQERSFEQHP 568          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: A0A6H5JH23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH23_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.820e-8
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQ 26
            MDWFVEEVADYEPN LDARKTTPAVQ
Sbjct:   61 MDWFVEEVADYEPNNLDARKTTPAVQ 86          
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Match: A0A6H5JSF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF6_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.400e-7
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0
Query:    1 MDWFVEEVADYEPNKLDARKTTPAVQ 26
            MDWFVEEVADYEPN LDARKTTPAVQ
Sbjct:  171 MDWFVEEVADYEPNNLDARKTTPAVQ 196          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13809.2267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FUA0_ECTSI5.820e-4490.80Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5KC16_9PHAE8.030e-4487.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUA1_ECTSI1.060e-4391.95Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
D7FUA2_ECTSI1.120e-4188.51Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
D7FHJ4_ECTSI4.300e-1654.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBQ0_9PHAE3.360e-1550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPS8_ECTSI6.260e-1552.63Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7G8A7_ECTSI3.520e-1342.05Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5JH23_9PHAE1.820e-896.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSF6_9PHAE1.400e-796.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13809contigE-siliculosus-1a_F_contig13809:23..1219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13809.2267.1mRNA_E-siliculosus-1a_F_contig13809.2267.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13809 23..1219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13809.2267.1 ID=prot_E-siliculosus-1a_F_contig13809.2267.1|Name=mRNA_E-siliculosus-1a_F_contig13809.2267.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=88bp
MDWFVEEVADYEPNKLDARKTTPAVQAGRKLGKRHLQILLKAVGRDCLRG
TNTPDEKVKVLVGIILPEAERKVGSTSHGTPERIDDDP
back to top