prot_E-siliculosus-1a_F_contig138.2261.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig138.2261.1
Unique Name	prot_E-siliculosus-1a_F_contig138.2261.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	594

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig138.2261.1 vs. uniprot
Match: D7G1J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J1_ECTSI)

HSP 1 Score: 822 bits (2124), Expect = 1.860e-296
Identity = 467/594 (78.62%), Postives = 475/594 (79.97%), Query Frame = 0

Query:    1 MAPPKLAMRNQAVQAVGEKYFQVALVGLATAGVLAIVAVSIGSTRGMFEFTIDRCDCLLTSGVEDAVAQGEECVFGQDYMGVDIGWKSFVIDKAYSTEGCLDGWEGTKDIGSPFGDGIYRKKSAVYGNGASGAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGEGESEENFCQAKPWSFEVPLYAGWTAIAHVAVMFLTSVWILSKSGLVEGILDGSKLVGGKVVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKM-GGSPMHTRNNTLRTGEIAGVSPKMALGGDIEGQAPGGHNLSSPGPVQSIPRAAAAPASKAXXXXXXXXXXXXXXXXXXXGALPRKQGGXXXXXXXXSEEEVSPAIRSSSPWDRDGEESGSSGDVETDSSLGSVARSPASVVSGKGHEKNRSEIDWGRIMDAGDNAGTAKPYDDGDEDNESPRLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV 593
            MAPPKLAMRNQAVQAVGEKYFQVAL                                                        VDIGWKSFVIDKAYSTEGCLDGWEGTKDIGSPFGDGIYRKKSAVYGNGA+GAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGEGESEE FCQAKPW+FEVPLYAGWTAIAHVAVMFLTSVWIL+KSGLVEGILDGSKLVGGK VTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKM GGSP HT++NTLRTGE AGV PK+ALGGDIEGQA GGHNLSSPGPVQSIPRA  AP SKA  XXXXXXXXXXXXXXX    LP K GGXXX     SEEEVSPAIRSS                                  GKGH K RSEIDWGRIMDAGDN GTAK YDDGDED++SP LSS MLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV
Sbjct:    1 MAPPKLAMRNQAVQAVGEKYFQVAL--------------------------------------------------------VDIGWKSFVIDKAYSTEGCLDGWEGTKDIGSPFGDGIYRKKSAVYGNGATGAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGEGESEEIFCQAKPWNFEVPLYAGWTAIAHVAVMFLTSVWILTKSGLVEGILDGSKLVGGKAVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKMQGGSPKHTKDNTLRTGERAGVRPKIALGGDIEGQATGGHNLSSPGPVQSIPRATGAPGSKAATXXXXXXXXXXXXXXX----LPGKPGGXXXRSASASEEEVSPAIRSSI---------------------------------GKGHGKTRSEIDWGRIMDAGDNDGTAKQYDDGDEDDDSPHLSSVMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV 501

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BLAST of mRNA_E-siliculosus-1a_F_contig138.2261.1 vs. uniprot
Match: A0A6H5L9G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G0_9PHAE)

HSP 1 Score: 452 bits (1164), Expect = 7.990e-153
Identity = 277/383 (72.32%), Postives = 284/383 (74.15%), Query Frame = 0

Query:  263 MFLTSVWILSKSGLVEGILDGSKLVGGKVVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKMGGSPMHTRNNTLRTGEIAGVSPKMALGGDIEGQAPGGHNLSSPGPVQSIPRAAAAPASKAXXXXXXXXXXXXXXXXXXXGALPRKQ---GGXXXXXXXXSEEEVSPAIRSSS-------------------------------------------------PWDRDGEESGSSGDVETDSSLGSVARSPASVVSGKGHEKNRSEIDWGRIMDAGDNAGTAKPYDDGDEDNESPRLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV 593
            MFLTSVWILSKSGLVEGILDGSKLV GK VT        AVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAE LVSPLRKMGGSP HT+NNTLRTGE AGV P +ALG DIEGQAPGGHNLSSPGPV+SIPRAA APASKA  XXXXXXXXXXXXXXXXX          GG        SEEEVSPAIRSS                                                  PWDRD      +GDVETDSSLG+VARSPASVVSGKGHEK RSEIDWGRIMDAG N GTAK YDDGDED++SP LSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPK RGSATHFEV
Sbjct:    1 MFLTSVWILSKSGLVEGILDGSKLVDGKAVT--------AVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEVLVSPLRKMGGSPKHTKNNTLRTGESAGVRPNIALGADIEGQAPGGHNLSSPGPVESIPRAAVAPASKAATXXXXXXXXXXXXXXXXXXXXXXXXXXPGGEGGRSASASEEEVSPAIRSSGSSGRTLNRRAHAMGIKPQSSMTSHHIIRRRQITMVNRDHVSTSKYHNKGPWDRD------AGDVETDSSLGNVARSPASVVSGKGHEKTRSEIDWGRIMDAGHNDGTAKSYDDGDEDDDSPHLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKARGSATHFEV 369

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig138.2261.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig138.2261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1J1_ECTSI	1.860e-296	78.62	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L9G0_9PHAE	7.990e-153	72.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 172..192
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 250..271
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 153..171
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 193..249
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 272..593
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 130..152
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 42..129
None	No IPR available	TMHMM	TMhelix		coord: 250..272
None	No IPR available	TMHMM	TMhelix		coord: 170..192
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 128..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig138	contig	E-siliculosus-1a_F_contig138:57687..68589 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig138.2261.1	mRNA_E-siliculosus-1a_F_contig138.2261.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig138 57635..68589 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig138.2261.1 ID=prot_E-siliculosus-1a_F_contig138.2261.1|Name=mRNA_E-siliculosus-1a_F_contig138.2261.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=594bp
MAPPKLAMRNQAVQAVGEKYFQVALVGLATAGVLAIVAVSIGSTRGMFEF
TIDRCDCLLTSGVEDAVAQGEECVFGQDYMGVDIGWKSFVIDKAYSTEGC
LDGWEGTKDIGSPFGDGIYRKKSAVYGNGASGAADASVGLFVVSAFIAII
MFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLG
DMESSLAATLFMATLDVCEDDWDTVGFPVGEGESEENFCQAKPWSFEVPL
YAGWTAIAHVAVMFLTSVWILSKSGLVEGILDGSKLVGGKVVTPRVVEYE
QAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEAL
VSPLRKMGGSPMHTRNNTLRTGEIAGVSPKMALGGDIEGQAPGGHNLSSP
GPVQSIPRAAAAPASKAATKAAKKAAKKAAKKEAKKGALPRKQGGGGGRS
ASASEEEVSPAIRSSSPWDRDGEESGSSGDVETDSSLGSVARSPASVVSG
KGHEKNRSEIDWGRIMDAGDNAGTAKPYDDGDEDNESPRLSSGMLGDLDM
MFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV*