prot_E-siliculosus-1a_F_contig13785.2252.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13785.2252.1
Unique Nameprot_E-siliculosus-1a_F_contig13785.2252.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length411
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A2D6PJL8_HALSX (DNA-directed DNA polymerase (Fragment) n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A2D6PJL8_HALSX)

HSP 1 Score: 752 bits (1942), Expect = 6.770e-267
Identity = 378/411 (91.97%), Postives = 390/411 (94.89%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR   GQG LNID+IPLDD  TFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQH+LLKPVL+PTYGIILYQEQVMQIAQVMAGY+LGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+L LTVTPPDVNVGGYKFTVDT+ RVVYGLGAIRGVGEGPIGAIVEAR  DGP+ D+FDFCRRID KRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGM+DMFG AFV A++  S+VYAEY   REWTDRERLSGE DT
Sbjct:  212 GLVKFDFLGLRTLTIIDWALEMVDKVRDAAGQGPLNIDAIPLDDGKTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHDLLKPVLTPTYGIILYQEQVMQIAQVMAGYTLGQADMLRRAMGKKKPEEMAKQRXGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLXLTVTPPDVNVGGYKFTVDTEGRVVYGLGAIRGVGEGPIGAIVEARNADGPFNDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMMDMFGXAFV-AEEEASDVYAEYRHVREWTDRERLSGEXDT 621          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: UPI001D0A525A (DNA polymerase III subunit alpha n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0A525A)

HSP 1 Score: 762 bits (1968), Expect = 4.950e-266
Identity = 384/412 (93.20%), Postives = 396/412 (96.12%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDS-NVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR   GQGALNID+IPLDD  TFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVL+PTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFM+GCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIV ARQ  GP+KD+FDFCRRID KRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQ+LGMLDMFGDAF  A+++ + +VYAEY  AREW+DRERLSGEKDT
Sbjct:  556 GLVKFDFLGLRTLTIIDWALEMVDKVRDAAGQGALNIDAIPLDDGKTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLTPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMDGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVAARQEGGPFKDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQSLGMLDMFGDAFAAAEEDTAVDVYAEYRHAREWSDRERLSGEKDT 967          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A7Z0LKE3_9GAMM (DNA polymerase III subunit alpha n=1 Tax=Halomonas salicampi TaxID=1449798 RepID=A0A7Z0LKE3_9GAMM)

HSP 1 Score: 761 bits (1965), Expect = 1.280e-265
Identity = 379/411 (92.21%), Postives = 396/411 (96.35%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR+V G+G LNID+IPLDD PTF+MLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQH+LL+PVL PTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFM+GCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+LKLTVTPPDVNVGGYKFTVD+DARVVYGLGAIRGVGEGPIGAIVEAR  +GP+ D+FDFCRRID KRMNKRTLEALIRSGALDNLGPNRAVLFA+MEDALKAAAQNH NQNLGMLDMFGDAF  A+DND  VYAEYLG REW+DRERL+GEK+T
Sbjct:  556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVEGEGPLNIDAIPLDDVPTFDMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHKLLEPVLKPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMDGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLKLTVTPPDVNVGGYKFTVDSDARVVYGLGAIRGVGEGPIGAIVEARDAEGPFTDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPNRAVLFASMEDALKAAAQNHTNQNLGMLDMFGDAFEAAEDND--VYAEYLGVREWSDRERLAGEKET 964          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: H0J691_9GAMM (DNA polymerase III subunit alpha n=103 Tax=root TaxID=1 RepID=H0J691_9GAMM)

HSP 1 Score: 754 bits (1948), Expect = 4.850e-263
Identity = 380/411 (92.46%), Postives = 392/411 (95.38%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWAL+MVDKVR VNGQ  LNID+IPLDD  TFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCA NGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGY+FTVDT+ RVVYGLGAIRGVGEGPIGAIVEAR TDGP+KD+FDFCRR+D KRMNKRTLEALIRSGALD LGPNRAVL AAMEDALKAAAQNHANQNLGMLDMFG++F  A++  S+ YAEY  AREWTDRERLSGEKDT
Sbjct:  556 GLVKFDFLGLRTLTIIDWALKMVDKVRGVNGQEPLNIDAIPLDDGKTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCADNGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYRFTVDTEGRVVYGLGAIRGVGEGPIGAIVEARNTDGPFKDLFDFCRRLDPKRMNKRTLEALIRSGALDTLGPNRAVLAAAMEDALKAAAQNHANQNLGMLDMFGESF-SAEEEASDPYAEYHNAREWTDRERLSGEKDT 965          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A556W7E4_HALSX (DNA polymerase III subunit alpha n=3 Tax=Halomonas TaxID=2745 RepID=A0A556W7E4_HALSX)

HSP 1 Score: 751 bits (1938), Expect = 1.520e-261
Identity = 378/411 (91.97%), Postives = 391/411 (95.13%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR+VN Q  L+ID+IPLDD  TFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+LKLTVTPPDVNVGGY+FTVD   RVVYGLGAIRGVGEGPIGAIV AR+++GP+KD+FDFCRRID KRMNKRTLEALIRSGALDNLGPNRAVL AA+EDALKAAAQNH NQNLGMLDMFGDAF  A+DND  VYAEY   REWTDRERL+GEKDT
Sbjct:  556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVNDQAPLDIDAIPLDDGATFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLKLTVTPPDVNVGGYRFTVDEQGRVVYGLGAIRGVGEGPIGAIVAARESEGPFKDMFDFCRRIDPKRMNKRTLEALIRSGALDNLGPNRAVLAAAVEDALKAAAQNHTNQNLGMLDMFGDAFEAAEDND--VYAEYRQVREWTDRERLAGEKDT 964          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A5R8MGP1_9GAMM (DNA polymerase III subunit alpha n=17 Tax=Halomonas TaxID=2745 RepID=A0A5R8MGP1_9GAMM)

HSP 1 Score: 743 bits (1918), Expect = 1.670e-258
Identity = 368/411 (89.54%), Postives = 388/411 (94.40%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR+V GQG LNID+IPLDDAPTFEMLK+AETTAVFQLESRGMKELIKRLLPDSL+DMIALVALFRPGPLQSGMVDDFINRKHGRAE+SYPHPDYQHELLKPVL PTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+L LTVTPPDVNVGGYKFTVD  ARVVYGLGAIRGVGEGPIGAIVEAR+  GP+ D+FDFCRR+D KRMNKRTLEALIRSGALD LGP+RAVL AA+EDALKAAAQN  NQNLGM+DMFG+AF E D+ + + Y +Y  AREWTD+ERL+GEKDT
Sbjct:  556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVEGQGPLNIDTIPLDDAPTFEMLKKAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKHGRAEISYPHPDYQHELLKPVLGPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLGLTVTPPDVNVGGYKFTVDEQARVVYGLGAIRGVGEGPIGAIVEAREAGGPFADLFDFCRRVDPKRMNKRTLEALIRSGALDTLGPSRAVLTAALEDALKAAAQNQTNQNLGMMDMFGEAFAEPDEGEQDAYGDYHHAREWTDKERLAGEKDT 966          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A7W5PAD5_9GAMM (DNA polymerase III subunit alpha n=1 Tax=Halomonas campaniensis TaxID=213554 RepID=A0A7W5PAD5_9GAMM)

HSP 1 Score: 742 bits (1915), Expect = 4.460e-258
Identity = 370/411 (90.02%), Postives = 391/411 (95.13%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR+V+GQG LNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAE+SYPHPDYQHELLKPVL PTYGIILYQEQVMQIAQVMAGY+LGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+L LTVTPPDVNVG YKF+VDT+ RVVYGLGAIRGVGEGPIGAIVEAR  DGP+ D+FDFCRR+D +RMNKRTLEALIRSGALD LGPNRAVL AA++DALKAAAQ   NQNLGM+DMFG+AFV  D+ +S+ YA YLGAREWTD+ERL+GEK+T
Sbjct:  556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVSGQGPLNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEISYPHPDYQHELLKPVLEPTYGIILYQEQVMQIAQVMAGYTLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLGLTVTPPDVNVGEYKFSVDTEGRVVYGLGAIRGVGEGPIGAIVEARAADGPFADLFDFCRRVDPRRMNKRTLEALIRSGALDTLGPNRAVLAAALDDALKAAAQTQTNQNLGMIDMFGEAFV--DEAESDAYAGYLGAREWTDKERLAGEKET 964          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: W7QB73_9GAMM (DNA-directed DNA polymerase n=1 Tax=Halomonas sp. BC04 TaxID=1403540 RepID=W7QB73_9GAMM)

HSP 1 Score: 723 bits (1865), Expect = 1.340e-257
Identity = 361/411 (87.83%), Postives = 384/411 (93.43%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR+  GQG LNID+IPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSL+DMIALVALFRPGPLQSGMVDDFINRKH RAE+SYPHPDYQHELLKPVL PTYGIILYQEQVMQIAQV+AGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDK+LAGNIFDLVEKFAGYGFNKSHSAAY LVSYQTAWLK+HYPGPFMAAVMSTEMDNLDKVVPLIEECR+L LTVTPPDVNVGGYKFTVD +ARVVYGLGAIRGVGEGPIGAIVEAR+  GP+ D+FDFCRR+D +RMNKRTLEALIRSGALDNLGPNRAVL AAME ALKAAAQ   NQNLGM+DMFG+AF  AD+ +++ Y  Y   REWTD+ERL+GEK+T
Sbjct:   54 GLVKFDFLGLRTLTIIDWALEMVDKVRAAAGQGPLNIDTIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKHARAEISYPHPDYQHELLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKSHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLGLTVTPPDVNVGGYKFTVDIEARVVYGLGAIRGVGEGPIGAIVEAREAGGPFTDLFDFCRRVDPRRMNKRTLEALIRSGALDNLGPNRAVLSAAMEAALKAAAQTQTNQNLGMVDMFGEAF--ADEAEADPYEAYRQVREWTDKERLAGEKET 462          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A1P8QZQ1_9GAMM (DNA polymerase III subunit alpha n=5 Tax=Halomonas TaxID=2745 RepID=A0A1P8QZQ1_9GAMM)

HSP 1 Score: 737 bits (1903), Expect = 2.880e-256
Identity = 367/411 (89.29%), Postives = 391/411 (95.13%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR+V G+G L+ID+IPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSL+DMIALVALFRPGPLQSGMVDDFINRKHGRAE+SYPHPDYQHE LK VL PTYGIILYQEQVMQIAQV+AGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDK+LAGNIFDLVEKFAGYGFNKSHSAAY LVSYQTAWLK+HYPGPFMAAV+STEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDT+ RVVYGLGAIRGVGEGPIGAIVEAR+ DGP+KD+FDFCRR+D KRMNKRTLEALIRSGALDNLGPNRAVL AA+E ALKAAAQN +NQNLGM+DMFG+AFV+ +  D  VYA+Y  AREWTD+ERL+GEKDT
Sbjct:  556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVKGEGPLDIDTIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKHGRAEISYPHPDYQHEWLKTVLEPTYGIILYQEQVMQIAQVLAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKSHYPGPFMAAVISTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTEGRVVYGLGAIRGVGEGPIGAIVEAREADGPFKDLFDFCRRVDPKRMNKRTLEALIRSGALDNLGPNRAVLSAALEAALKAAAQNLSNQNLGMIDMFGEAFVDEEVGD--VYADYRDAREWTDKERLAGEKDT 964          
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A7X3GYY1_9GAMM (DNA polymerase III subunit alpha n=2 Tax=Halomonas TaxID=2745 RepID=A0A7X3GYY1_9GAMM)

HSP 1 Score: 736 bits (1901), Expect = 5.760e-256
Identity = 371/411 (90.27%), Postives = 387/411 (94.16%), Query Frame = 0
Query:    1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 411
            GLVKFDFLGLRTLTIIDWALEMVDKVR+V G+G L+IDSIPLDD+PTFEMLKRAETTAVFQLESRGMKELIKRLLPDSL+DMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQH LLKPVL PTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCA +GIDK+LAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR LKLTVTPPDVNVGGYKFTVD D RVVYGLGAIRGVGEGPI AIV+AR+T G + D+FDFCRRID KR+ KRTLEALIRSGALDNLGPNRAVL AA+EDALKAAAQNH+NQN GM+DMFG+AFVE DD D  VYA YL AREWTDRERLSGEK T
Sbjct:  556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVEGRGPLDIDSIPLDDSPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHALLKPVLEPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCADHGIDKELAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRQLKLTVTPPDVNVGGYKFTVDKDKRVVYGLGAIRGVGEGPIDAIVQARETGGAFTDLFDFCRRIDPKRLTKRTLEALIRSGALDNLGPNRAVLAAALEDALKAAAQNHSNQNRGMVDMFGEAFVEQDDTD--VYANYLNAREWTDRERLSGEKVT 964          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D6PJL8_HALSX6.770e-26791.97DNA-directed DNA polymerase (Fragment) n=1 Tax=Hal... [more]
UPI001D0A525A4.950e-26693.20DNA polymerase III subunit alpha n=1 Tax=Halomonas... [more]
A0A7Z0LKE3_9GAMM1.280e-26592.21DNA polymerase III subunit alpha n=1 Tax=Halomonas... [more]
H0J691_9GAMM4.850e-26392.46DNA polymerase III subunit alpha n=103 Tax=root Ta... [more]
A0A556W7E4_HALSX1.520e-26191.97DNA polymerase III subunit alpha n=3 Tax=Halomonas... [more]
A0A5R8MGP1_9GAMM1.670e-25889.54DNA polymerase III subunit alpha n=17 Tax=Halomona... [more]
A0A7W5PAD5_9GAMM4.460e-25890.02DNA polymerase III subunit alpha n=1 Tax=Halomonas... [more]
W7QB73_9GAMM1.340e-25787.83DNA-directed DNA polymerase n=1 Tax=Halomonas sp. ... [more]
A0A1P8QZQ1_9GAMM2.880e-25689.29DNA polymerase III subunit alpha n=5 Tax=Halomonas... [more]
A0A7X3GYY1_9GAMM5.760e-25690.27DNA polymerase III subunit alpha n=2 Tax=Halomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040982DNA polymerase III alpha subunit finger domainPFAMPF17657DNA_pol3_fingercoord: 12..186
e-value: 6.9E-66
score: 220.7
IPR004805DNA polymerase III, alpha subunitTIGRFAMTIGR00594TIGR00594coord: 1..410
e-value: 4.3E-168
score: 559.3
IPR004805DNA polymerase III, alpha subunitPANTHERPTHR32294FAMILY NOT NAMEDcoord: 1..410
IPR029460DNA polymerase, helix-hairpin-helix motifPFAMPF14579HHH_6coord: 260..347
e-value: 8.3E-27
score: 93.3
NoneNo IPR availablePANTHERPTHR32294:SF0DNA POLYMERASE III SUBUNIT ALPHAcoord: 1..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13785contigE-siliculosus-1a_F_contig13785:2..1234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13785.2252.1mRNA_E-siliculosus-1a_F_contig13785.2252.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13785 2..1234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13785.2252.1 ID=prot_E-siliculosus-1a_F_contig13785.2252.1|Name=mRNA_E-siliculosus-1a_F_contig13785.2252.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=411bp
GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEM
LKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVD
DFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAG
YSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVE
KFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVP
LIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAI
VEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLF
AAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWT
DRERLSGEKDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029460DNAPol_HHH
IPR004805PolC_alpha
IPR040982DNA_pol3_finger