mRNA_E-siliculosus-1a_F_contig13785.2252.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A2D6PJL8_HALSX (DNA-directed DNA polymerase (Fragment) n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A2D6PJL8_HALSX) HSP 1 Score: 752 bits (1942), Expect = 6.770e-267 Identity = 378/411 (91.97%), Postives = 390/411 (94.89%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR GQG LNID+IPLDD TFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQH+LLKPVL+PTYGIILYQEQVMQIAQVMAGY+LGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+L LTVTPPDVNVGGYKFTVDT+ RVVYGLGAIRGVGEGPIGAIVEAR DGP+ D+FDFCRRID KRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGM+DMFG AFV A++ S+VYAEY REWTDRERLSGE DT
Sbjct: 212 GLVKFDFLGLRTLTIIDWALEMVDKVRDAAGQGPLNIDAIPLDDGKTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHDLLKPVLTPTYGIILYQEQVMQIAQVMAGYTLGQADMLRRAMGKKKPEEMAKQRXGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLXLTVTPPDVNVGGYKFTVDTEGRVVYGLGAIRGVGEGPIGAIVEARNADGPFNDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMMDMFGXAFV-AEEEASDVYAEYRHVREWTDRERLSGEXDT 621
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: UPI001D0A525A (DNA polymerase III subunit alpha n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0A525A) HSP 1 Score: 762 bits (1968), Expect = 4.950e-266 Identity = 384/412 (93.20%), Postives = 396/412 (96.12%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDS-NVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR GQGALNID+IPLDD TFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVL+PTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFM+GCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIV ARQ GP+KD+FDFCRRID KRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQ+LGMLDMFGDAF A+++ + +VYAEY AREW+DRERLSGEKDT
Sbjct: 556 GLVKFDFLGLRTLTIIDWALEMVDKVRDAAGQGALNIDAIPLDDGKTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLTPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMDGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVAARQEGGPFKDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQSLGMLDMFGDAFAAAEEDTAVDVYAEYRHAREWSDRERLSGEKDT 967
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A7Z0LKE3_9GAMM (DNA polymerase III subunit alpha n=1 Tax=Halomonas salicampi TaxID=1449798 RepID=A0A7Z0LKE3_9GAMM) HSP 1 Score: 761 bits (1965), Expect = 1.280e-265 Identity = 379/411 (92.21%), Postives = 396/411 (96.35%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR+V G+G LNID+IPLDD PTF+MLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQH+LL+PVL PTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFM+GCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+LKLTVTPPDVNVGGYKFTVD+DARVVYGLGAIRGVGEGPIGAIVEAR +GP+ D+FDFCRRID KRMNKRTLEALIRSGALDNLGPNRAVLFA+MEDALKAAAQNH NQNLGMLDMFGDAF A+DND VYAEYLG REW+DRERL+GEK+T
Sbjct: 556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVEGEGPLNIDAIPLDDVPTFDMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHKLLEPVLKPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMDGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLKLTVTPPDVNVGGYKFTVDSDARVVYGLGAIRGVGEGPIGAIVEARDAEGPFTDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPNRAVLFASMEDALKAAAQNHTNQNLGMLDMFGDAFEAAEDND--VYAEYLGVREWSDRERLAGEKET 964
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: H0J691_9GAMM (DNA polymerase III subunit alpha n=103 Tax=root TaxID=1 RepID=H0J691_9GAMM) HSP 1 Score: 754 bits (1948), Expect = 4.850e-263 Identity = 380/411 (92.46%), Postives = 392/411 (95.38%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWAL+MVDKVR VNGQ LNID+IPLDD TFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCA NGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGY+FTVDT+ RVVYGLGAIRGVGEGPIGAIVEAR TDGP+KD+FDFCRR+D KRMNKRTLEALIRSGALD LGPNRAVL AAMEDALKAAAQNHANQNLGMLDMFG++F A++ S+ YAEY AREWTDRERLSGEKDT
Sbjct: 556 GLVKFDFLGLRTLTIIDWALKMVDKVRGVNGQEPLNIDAIPLDDGKTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCADNGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYRFTVDTEGRVVYGLGAIRGVGEGPIGAIVEARNTDGPFKDLFDFCRRLDPKRMNKRTLEALIRSGALDTLGPNRAVLAAAMEDALKAAAQNHANQNLGMLDMFGESF-SAEEEASDPYAEYHNAREWTDRERLSGEKDT 965
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A556W7E4_HALSX (DNA polymerase III subunit alpha n=3 Tax=Halomonas TaxID=2745 RepID=A0A556W7E4_HALSX) HSP 1 Score: 751 bits (1938), Expect = 1.520e-261 Identity = 378/411 (91.97%), Postives = 391/411 (95.13%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR+VN Q L+ID+IPLDD TFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+LKLTVTPPDVNVGGY+FTVD RVVYGLGAIRGVGEGPIGAIV AR+++GP+KD+FDFCRRID KRMNKRTLEALIRSGALDNLGPNRAVL AA+EDALKAAAQNH NQNLGMLDMFGDAF A+DND VYAEY REWTDRERL+GEKDT
Sbjct: 556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVNDQAPLDIDAIPLDDGATFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLKLTVTPPDVNVGGYRFTVDEQGRVVYGLGAIRGVGEGPIGAIVAARESEGPFKDMFDFCRRIDPKRMNKRTLEALIRSGALDNLGPNRAVLAAAVEDALKAAAQNHTNQNLGMLDMFGDAFEAAEDND--VYAEYRQVREWTDRERLAGEKDT 964
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A5R8MGP1_9GAMM (DNA polymerase III subunit alpha n=17 Tax=Halomonas TaxID=2745 RepID=A0A5R8MGP1_9GAMM) HSP 1 Score: 743 bits (1918), Expect = 1.670e-258 Identity = 368/411 (89.54%), Postives = 388/411 (94.40%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR+V GQG LNID+IPLDDAPTFEMLK+AETTAVFQLESRGMKELIKRLLPDSL+DMIALVALFRPGPLQSGMVDDFINRKHGRAE+SYPHPDYQHELLKPVL PTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+L LTVTPPDVNVGGYKFTVD ARVVYGLGAIRGVGEGPIGAIVEAR+ GP+ D+FDFCRR+D KRMNKRTLEALIRSGALD LGP+RAVL AA+EDALKAAAQN NQNLGM+DMFG+AF E D+ + + Y +Y AREWTD+ERL+GEKDT
Sbjct: 556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVEGQGPLNIDTIPLDDAPTFEMLKKAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKHGRAEISYPHPDYQHELLKPVLGPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLGLTVTPPDVNVGGYKFTVDEQARVVYGLGAIRGVGEGPIGAIVEAREAGGPFADLFDFCRRVDPKRMNKRTLEALIRSGALDTLGPSRAVLTAALEDALKAAAQNQTNQNLGMMDMFGEAFAEPDEGEQDAYGDYHHAREWTDKERLAGEKDT 966
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A7W5PAD5_9GAMM (DNA polymerase III subunit alpha n=1 Tax=Halomonas campaniensis TaxID=213554 RepID=A0A7W5PAD5_9GAMM) HSP 1 Score: 742 bits (1915), Expect = 4.460e-258 Identity = 370/411 (90.02%), Postives = 391/411 (95.13%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR+V+GQG LNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAE+SYPHPDYQHELLKPVL PTYGIILYQEQVMQIAQVMAGY+LGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR+L LTVTPPDVNVG YKF+VDT+ RVVYGLGAIRGVGEGPIGAIVEAR DGP+ D+FDFCRR+D +RMNKRTLEALIRSGALD LGPNRAVL AA++DALKAAAQ NQNLGM+DMFG+AFV D+ +S+ YA YLGAREWTD+ERL+GEK+T
Sbjct: 556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVSGQGPLNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEISYPHPDYQHELLKPVLEPTYGIILYQEQVMQIAQVMAGYTLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLGLTVTPPDVNVGEYKFSVDTEGRVVYGLGAIRGVGEGPIGAIVEARAADGPFADLFDFCRRVDPRRMNKRTLEALIRSGALDTLGPNRAVLAAALDDALKAAAQTQTNQNLGMIDMFGEAFV--DEAESDAYAGYLGAREWTDKERLAGEKET 964
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: W7QB73_9GAMM (DNA-directed DNA polymerase n=1 Tax=Halomonas sp. BC04 TaxID=1403540 RepID=W7QB73_9GAMM) HSP 1 Score: 723 bits (1865), Expect = 1.340e-257 Identity = 361/411 (87.83%), Postives = 384/411 (93.43%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR+ GQG LNID+IPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSL+DMIALVALFRPGPLQSGMVDDFINRKH RAE+SYPHPDYQHELLKPVL PTYGIILYQEQVMQIAQV+AGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDK+LAGNIFDLVEKFAGYGFNKSHSAAY LVSYQTAWLK+HYPGPFMAAVMSTEMDNLDKVVPLIEECR+L LTVTPPDVNVGGYKFTVD +ARVVYGLGAIRGVGEGPIGAIVEAR+ GP+ D+FDFCRR+D +RMNKRTLEALIRSGALDNLGPNRAVL AAME ALKAAAQ NQNLGM+DMFG+AF AD+ +++ Y Y REWTD+ERL+GEK+T
Sbjct: 54 GLVKFDFLGLRTLTIIDWALEMVDKVRAAAGQGPLNIDTIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKHARAEISYPHPDYQHELLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKSHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLGLTVTPPDVNVGGYKFTVDIEARVVYGLGAIRGVGEGPIGAIVEAREAGGPFTDLFDFCRRVDPRRMNKRTLEALIRSGALDNLGPNRAVLSAAMEAALKAAAQTQTNQNLGMVDMFGEAF--ADEAEADPYEAYRQVREWTDKERLAGEKET 462
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A1P8QZQ1_9GAMM (DNA polymerase III subunit alpha n=5 Tax=Halomonas TaxID=2745 RepID=A0A1P8QZQ1_9GAMM) HSP 1 Score: 737 bits (1903), Expect = 2.880e-256 Identity = 367/411 (89.29%), Postives = 391/411 (95.13%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR+V G+G L+ID+IPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSL+DMIALVALFRPGPLQSGMVDDFINRKHGRAE+SYPHPDYQHE LK VL PTYGIILYQEQVMQIAQV+AGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCAANGIDK+LAGNIFDLVEKFAGYGFNKSHSAAY LVSYQTAWLK+HYPGPFMAAV+STEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDT+ RVVYGLGAIRGVGEGPIGAIVEAR+ DGP+KD+FDFCRR+D KRMNKRTLEALIRSGALDNLGPNRAVL AA+E ALKAAAQN +NQNLGM+DMFG+AFV+ + D VYA+Y AREWTD+ERL+GEKDT
Sbjct: 556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVKGEGPLDIDTIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKHGRAEISYPHPDYQHEWLKTVLEPTYGIILYQEQVMQIAQVLAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCAANGIDKELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKSHYPGPFMAAVISTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTEGRVVYGLGAIRGVGEGPIGAIVEAREADGPFKDLFDFCRRVDPKRMNKRTLEALIRSGALDNLGPNRAVLSAALEAALKAAAQNLSNQNLGMIDMFGEAFVDEEVGD--VYADYRDAREWTDKERLAGEKDT 964
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Match: A0A7X3GYY1_9GAMM (DNA polymerase III subunit alpha n=2 Tax=Halomonas TaxID=2745 RepID=A0A7X3GYY1_9GAMM) HSP 1 Score: 736 bits (1901), Expect = 5.760e-256 Identity = 371/411 (90.27%), Postives = 387/411 (94.16%), Query Frame = 1
Query: 1 GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTDARVVYGLGAIRGVGEGPIGAIVEARQTDGPYKDIFDFCRRIDSKRMNKRTLEALIRSGALDNLGPNRAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFVEADDNDSNVYAEYLGAREWTDRERLSGEKDT 1233
GLVKFDFLGLRTLTIIDWALEMVDKVR+V G+G L+IDSIPLDD+PTFEMLKRAETTAVFQLESRGMKELIKRLLPDSL+DMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQH LLKPVL PTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQR GFMEGCA +GIDK+LAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECR LKLTVTPPDVNVGGYKFTVD D RVVYGLGAIRGVGEGPI AIV+AR+T G + D+FDFCRRID KR+ KRTLEALIRSGALDNLGPNRAVL AA+EDALKAAAQNH+NQN GM+DMFG+AFVE DD D VYA YL AREWTDRERLSGEK T
Sbjct: 556 GLVKFDFLGLRTLTIIDWALEMVDKVRAVEGRGPLDIDSIPLDDSPTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKHGRAEVSYPHPDYQHALLKPVLEPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGKKKPEEMAKQRAGFMEGCADHGIDKELAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPGPFMAAVMSTEMDNLDKVVPLIEECRQLKLTVTPPDVNVGGYKFTVDKDKRVVYGLGAIRGVGEGPIDAIVQARETGGAFTDLFDFCRRIDPKRLTKRTLEALIRSGALDNLGPNRAVLAAALEDALKAAAQNHSNQNRGMVDMFGEAFVEQDDTD--VYANYLNAREWTDRERLSGEKVT 964 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13785.2252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig13785.2252.1 >prot_E-siliculosus-1a_F_contig13785.2252.1 ID=prot_E-siliculosus-1a_F_contig13785.2252.1|Name=mRNA_E-siliculosus-1a_F_contig13785.2252.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=411bp GLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGALNIDSIPLDDAPTFEMback to top mRNA from alignment at E-siliculosus-1a_F_contig13785:2..1234+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig13785.2252.1 ID=mRNA_E-siliculosus-1a_F_contig13785.2252.1|Name=mRNA_E-siliculosus-1a_F_contig13785.2252.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1233bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13785:2..1234+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13785:2..1234+ >mRNA_E-siliculosus-1a_F_contig13785.2252.1 ID=mRNA_E-siliculosus-1a_F_contig13785.2252.1|Name=mRNA_E-siliculosus-1a_F_contig13785.2252.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2466bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13785:2..1234+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |