prot_E-siliculosus-1a_F_contig1374.2239.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1374.2239.1
Unique Nameprot_E-siliculosus-1a_F_contig1374.2239.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length296
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1374.2239.1 vs. uniprot
Match: D7G5A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A1_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 2.970e-123
Identity = 272/295 (92.20%), Postives = 274/295 (92.88%), Query Frame = 0 
Query:    1 MRSTSYPRVPRALFCSALLLSQHAVVDANNWTTGRASSSRSSTLAVMQPGGRNRPIRDWKAIKREAEEKRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVSAEVLDMEEDTAEDIGIMLAKVVVIATAGVYGVKKVVAFAKAFTKARKDRKISGEEGGGVADGLSAVAATKDAKDKDKXXXXXXXXXDAEVASGGNKEGDAXXXXXXXXXXXXXXXXXXXXXXSASEMLAGMGKAAKEMKKRAKGSLENLKSGLGEATGRGDEDVQGAGEGDSPPSLPKGVDGGKVDVSYV 295
            MRSTSYPRVPRALFCSALLLSQHAVVDANNW TGRASSSRSSTLAVMQPGGRNRPIRDWKAIKREAEEKRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXX ETVSAE LDMEEDTAEDIGIMLAKVVVIATAGVYG+KKVVAFAKAFTKARKDRK SGEEGGGVADGLSAVAATKDAKDKD XXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXSASEMLAGMGKAAK+MKKRAK SLENLKSGLGEATGRGDEDVQGAGEGDSPPSLPKGV GGKVDVSYV
Sbjct:    1 MRSTSYPRVPRALFCSALLLSQHAVVDANNWATGRASSSRSSTLAVMQPGGRNRPIRDWKAIKREAEEKRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETVSAEALDMEEDTAEDIGIMLAKVVVIATAGVYGIKKVVAFAKAFTKARKDRKSSGEEGGGVADGLSAVAATKDAKDKDXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXSASEMLAGMGKAAKDMKKRAKDSLENLKSGLGEATGRGDEDVQGAGEGDSPPSLPKGVAGGKVDVSYV 293
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1374.2239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5A1_ECTSI2.970e-12392.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..295
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.624

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1374contigE-siliculosus-1a_F_contig1374:13744..17153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1374.2239.1mRNA_E-siliculosus-1a_F_contig1374.2239.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1374 13744..17153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1374.2239.1 ID=prot_E-siliculosus-1a_F_contig1374.2239.1|Name=mRNA_E-siliculosus-1a_F_contig1374.2239.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=296bp
MRSTSYPRVPRALFCSALLLSQHAVVDANNWTTGRASSSRSSTLAVMQPG
GRNRPIRDWKAIKREAEEKRKNKAEEKADEAVEAAQETVEQVVDEQVDQQ
LETVSAEVLDMEEDTAEDIGIMLAKVVVIATAGVYGVKKVVAFAKAFTKA
RKDRKISGEEGGGVADGLSAVAATKDAKDKDKDDDNDNGGGDAEVASGGN
KEGDAAAEEEEDETTDGFVTADEEEEDSASEMLAGMGKAAKEMKKRAKGS
LENLKSGLGEATGRGDEDVQGAGEGDSPPSLPKGVDGGKVDVSYV*
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