prot_E-siliculosus-1a_F_contig13676.2194.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13676.2194.1
Unique Nameprot_E-siliculosus-1a_F_contig13676.2194.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length72
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: D7G0Q0_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Q0_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.420e-36
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    8 WRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESEK 72
            WRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESEK
Sbjct:  313 WRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESEK 377          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: A0A7S2UT53_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT53_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.930e-34
Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 0
Query:    1 VLNDFYEWRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESE 71
            VLNDFYE+RF+PL +P PTL  D+R L+NNRELSDVTFIVDGFPVYASR HLA+RSEHFRAMLYGGMRES+
Sbjct:   34 VLNDFYEYRFEPLNIPGPTLINDLRSLINNRELSDVTFIVDGFPVYASRAHLAVRSEHFRAMLYGGMRESQ 104          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: A0A7S2WPN5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPN5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.730e-25
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    1 VLNDFYEWRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRES 70
            VLND+YE+R +P+ +P  T   DMR LVNNRELSDVTF+V+G  VYASR+HLA RSEHFRAML+GGMRES
Sbjct:  337 VLNDYYEYRLEPVWIPESTYVTDMRTLVNNRELSDVTFLVEGQAVYASRIHLAARSEHFRAMLFGGMRES 406          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: A0A7R9UG27_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG27_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.640e-24
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 VLNDFYEWRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRES 70
            VLNDFYE+RFQ L + P     +MR LVNN+  SDVTFIVDG P+YA+R HLA R EHFRAMLYG MRE+
Sbjct:   47 VLNDFYEYRFQHLSIAPSAFLSEMRSLVNNQMFSDVTFIVDGIPIYATRAHLAARCEHFRAMLYGEMREA 116          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: A0A835YYB0_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.670e-23
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 0
Query:   11 QPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESE 71
            +PLLVPP TL  D+R +VN RELSDVTF+VDGFPV+ASR HLA RSEHFRAMLYGG+RES+
Sbjct:  331 EPLLVPPSTLAADLRGMVNCRELSDVTFLVDGFPVFASRAHLAARSEHFRAMLYGGLRESQ 391          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: A0A8J9S1L4_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S1L4_PHATR)

HSP 1 Score: 90.9 bits (224), Expect = 8.580e-21
Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    1 VLNDFYEWRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRES 70
            VLNDFY++R +P+L+PPPTL  D  +++NN +LSDV F+V+G  V+A R  LA RSE+FR ML GGMRES
Sbjct:   41 VLNDFYKFRLKPILMPPPTLVNDFSRMINNPDLSDVRFLVEGKDVFAHRSVLAFRSEYFRVMLCGGMRES 110          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: B7FP97_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FP97_PHATC)

HSP 1 Score: 90.9 bits (224), Expect = 9.940e-20
Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    1 VLNDFYEWRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRES 70
            VLNDFY++R +P+L+PPPTL  D  +++NN +LSDV F+V+G  V+A R  LA RSE+FR ML GGMRES
Sbjct:  307 VLNDFYKFRLKPILMPPPTLVNDFSRMINNPDLSDVRFLVEGKDVFAHRSVLAFRSEYFRVMLCGGMRES 376          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: A0A7S1U372_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U372_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.550e-19
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0
Query:   12 PLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRES 70
            P+ +PP +L  D+R L+NN++ SDVTFIV G PVYA+R HLA RSEHFRAMLYGGMRE+
Sbjct:  331 PVAIPPSSLVADLRSLINNKDFSDVTFIVGGEPVYATRAHLAARSEHFRAMLYGGMREA 389          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: A0A6U6MZ52_9DINO (Hypothetical protein n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A6U6MZ52_9DINO)

HSP 1 Score: 87.8 bits (216), Expect = 1.250e-18
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   10 FQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRES 70
            F+P+L+PP  L +D+RKL+NN   +DVTF+V+   VYA+R HLA RSEHFRA+LYGGMRES
Sbjct:  331 FEPVLIPPSILMDDLRKLINNPMFADVTFLVENQTVYATRAHLASRSEHFRALLYGGMRES 391          
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Match: B8C0A8_THAPS (BTB domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A8_THAPS)

HSP 1 Score: 85.5 bits (210), Expect = 8.180e-18
Identity = 39/70 (55.71%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    1 VLNDFYEWRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRES 70
            VLNDFY++R +P+ +PP  L  D+R+L+   ++SDVTFIV+G  V+A+R  LA+RSE+F  ML+GGMRES
Sbjct:  283 VLNDFYKFRLKPVSIPPSALVSDLRRLMIREDMSDVTFIVEGQEVFANRALLAVRSEYFDVMLFGGMRES 352          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13676.2194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Q0_ECTSI3.420e-36100.00BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2UT53_9STRA1.930e-3481.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2WPN5_9STRA1.730e-2571.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UG27_9STRA1.640e-2467.14Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835YYB0_9STRA3.670e-2377.05BTB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A8J9S1L4_PHATR8.580e-2160.00Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
B7FP97_PHATC9.940e-2060.00Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A7S1U372_9STRA3.550e-1967.80Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U6MZ52_9DINO1.250e-1863.93Hypothetical protein n=2 Tax=Brandtodinium nutricu... [more]
B8C0A8_THAPS8.180e-1855.71BTB domain-containing protein n=1 Tax=Thalassiosir... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.710.10coord: 7..72
e-value: 1.1E-16
score: 63.0
NoneNo IPR availablePANTHERPTHR46306FAMILY NOT NAMEDcoord: 19..71
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 26..71
e-value: 7.3E-7
score: 29.4
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 34..72
score: 9.889
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 15..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13676contigE-siliculosus-1a_F_contig13676:922..1137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13676.2194.1mRNA_E-siliculosus-1a_F_contig13676.2194.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13676 922..1137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13676.2194.1 ID=prot_E-siliculosus-1a_F_contig13676.2194.1|Name=mRNA_E-siliculosus-1a_F_contig13676.2194.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=72bp
VLNDFYEWRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRV
HLALRSEHFRAMLYGGMRESEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011333SKP1/BTB/POZ_sf
IPR000210BTB/POZ_dom