prot_E-siliculosus-1a_F_contig1367.2193.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1367.2193.1
Unique Nameprot_E-siliculosus-1a_F_contig1367.2193.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length132
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: A0A6H5JHB6_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB6_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 2.750e-78
Identity = 126/131 (96.18%), Postives = 126/131 (96.18%), Query Frame = 0
Query:    1 MRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSKGGEEGR 131
            MRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLD     FIDAALIAEHSKGGEEGR
Sbjct:  337 MRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDXXXXXFIDAALIAEHSKGGEEGR 467          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: A0A836CNE1_9STRA (Peptide chain release factor 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNE1_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.300e-48
Identity = 80/120 (66.67%), Postives = 99/120 (82.50%), Query Frame = 0
Query:    1 MRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALI 120
            MR+QGAGGQHVNTTDSAVRLTHLPTG+  + QSDRSQH+N E+A+R LR K+  REE ER A R +  A LG NA+G+QIRSYV +PYQMVKDHRTG +  DV+GV+DG +DGF+++AL+
Sbjct:  244 MRSQGAGGQHVNTTDSAVRLTHLPTGITVMCQSDRSQHRNHESALRQLRGKLLAREEAERAAARAQQRASLGANAWGSQIRSYVFAPYQMVKDHRTGHKTADVAGVMDGDIDGFVESALL 363          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: A0A2P4XMB8_9STRA (Peptide chain release factor n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMB8_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.370e-44
Identity = 74/129 (57.36%), Postives = 96/129 (74.42%), Query Frame = 0
Query:    2 RAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSKGGEEG 130
            R+ G GGQHVN+TDSA+R+THLPTG+V  SQSDRSQH+N+  AM  LRAK++QR+ +E    R ++A GLG+NA+GNQIRSYVL PYQ+VKDHRT   EG+   VLDG +D FI+  L+   +    +G
Sbjct:   98 RSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLDEEVQSRQKFAQGLGENAWGNQIRSYVLHPYQLVKDHRTNYSEGNTGQVLDGDIDHFIEKMLLHHAASNNPDG 226          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: A0A421GPH8_9STRA (RF_PROK_I domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GPH8_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.060e-43
Identity = 74/124 (59.68%), Postives = 96/124 (77.42%), Query Frame = 0
Query:    2 RAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSK 125
            R+ G GGQHVNTTDSA+R+THLPTG+V  SQSDRSQH+N+  A+  LRAK++QRE E++  KR ++  GLGDNA+G+QIRSYVL PYQMVKDHRT   E + + VLDG +D FI+  L+ + + 
Sbjct:  223 RSSGPGGQHVNTTDSAIRITHLPTGIVVQSQSDRSQHRNKAEALAMLRAKLYQRELEDQARKRQQFTQGLGDNAWGSQIRSYVLHPYQMVKDHRTNYSESNTALVLDGDIDQFIEKMLLQQTAS 346          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: G4ZDJ3_PHYSP (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDJ3_PHYSP)

HSP 1 Score: 157 bits (397), Expect = 1.360e-43
Identity = 74/128 (57.81%), Postives = 99/128 (77.34%), Query Frame = 0
Query:    2 RAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSKGGEE 129
            R+ GAGGQHVNTTDSA+R+THLPTG+V  SQS+RSQH+N+  A+  LRAK++QR+ +E   K+ ++A GLG+NA+GNQIRSYVL PYQ+VKDHRT   EG+ + VLDG +D FI+  L+ + +    E
Sbjct:  321 RSSGAGGQHVNTTDSAIRITHLPTGIVVQSQSERSQHRNKAEALAVLRAKLYQRKLDEEARKKQQFAQGLGENAWGNQIRSYVLYPYQLVKDHRTNYSEGNTAQVLDGDIDHFIEKMLLHQAASSSNE 448          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: W2QJH8_PHYPN (Peptide chain release factor 2 n=9 Tax=Phytophthora TaxID=4783 RepID=W2QJH8_PHYPN)

HSP 1 Score: 157 bits (396), Expect = 1.710e-43
Identity = 75/121 (61.98%), Postives = 95/121 (78.51%), Query Frame = 0
Query:    2 RAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAE 122
            R+ G GGQHVN+TDSA+R+THLPTG+V  SQSDRSQH+N+  AM  LRAK++QR+ EE    R ++A GLGDNA+GNQIRSYVL PYQ+VKDHRT   EG+ + VLDG +D FI+  L+ +
Sbjct:  317 RSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKAEAMAILRAKLYQRKLEEEARARQQFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNTAQVLDGDIDQFIEKMLLQQ 437          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: H3GA21_PHYRM (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA21_PHYRM)

HSP 1 Score: 155 bits (393), Expect = 1.720e-43
Identity = 74/124 (59.68%), Postives = 96/124 (77.42%), Query Frame = 0
Query:    2 RAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSK 125
            R+ G GGQHVN+TDSA+R+THLPTG+V  SQSDRSQH+N+  A+  LRAK++QR+ EE   KR ++A GLGDNA+GNQIRSYVL PYQMVKDHRT   E + + VLDG +D F++  L+ + + 
Sbjct:  262 RSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKAEALAMLRAKLYQRKLEEEALKRQQFAQGLGDNAWGNQIRSYVLHPYQMVKDHRTNYSETNTAQVLDGDIDQFVEKMLLHQAAS 385          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: A0A2P4X072_9STRA (Peptide chain release factor 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X072_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.090e-43
Identity = 73/119 (61.34%), Postives = 93/119 (78.15%), Query Frame = 0
Query:    2 RAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALI 120
            R+ G GGQHVN+TDSA+R+THLPTG+V  SQSDRSQH+N+  AM  LRAK++QR+ +E    R ++A GLG+NA+GNQIRSYVL PYQ+VKDHRT   EG+   VLDG +D FI+  L+
Sbjct:  161 RSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLDEEVQSRQKFAQGLGENAWGNQIRSYVLHPYQLVKDHRTNYSEGNTGQVLDGDIDHFIEKMLL 279          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: D0NMN6_PHYIT (Peptide chain release factor, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMN6_PHYIT)

HSP 1 Score: 155 bits (391), Expect = 2.480e-43
Identity = 77/131 (58.78%), Postives = 100/131 (76.34%), Query Frame = 0
Query:    2 RAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSKGG-EEGR 131
            R+ G GGQHVN+TDSA+R+THL TG+V  SQSDRSQH+N+  AM  LRAK++QR+ EE    R ++A GLGDNA+GNQIRSYVL PYQ+VKDHRT   EG+++ VLDG +D FI+  L+ + +    +EGR
Sbjct:  248 RSSGPGGQHVNSTDSAIRITHLRTGIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKMLLHQTAPNNPDEGR 378          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Match: K3WM13_GLOUD (RF_PROK_I domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM13_GLOUD)

HSP 1 Score: 153 bits (387), Expect = 6.310e-43
Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 0
Query:    2 RAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSKGGEEGR 131
            R+ GAGGQHVNTTDSA+R+THLPTG+V  SQSDRSQH+N+  AM  LRAK++QRE E++   + ++  GLGDNA+GNQIRSYVL PY+MVKDHRT     D   VLDG LD F++  LI +    G+  R
Sbjct:  225 RSSGAGGQHVNTTDSAIRITHLPTGIVVQSQSDRSQHRNKAEAMEMLRAKLYQRELEKQVHVKQQFTQGLGDNAWGNQIRSYVLHPYKMVKDHRTNLSVTDPKLVLDGELDRFMEEMLIFQAGGAGDSDR 354          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB6_9PHAE2.750e-7896.18RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CNE1_9STRA2.300e-4866.67Peptide chain release factor 2 n=1 Tax=Tribonema m... [more]
A0A2P4XMB8_9STRA1.370e-4457.36Peptide chain release factor n=1 Tax=Phytophthora ... [more]
A0A421GPH8_9STRA1.060e-4359.68RF_PROK_I domain-containing protein n=2 Tax=Phytop... [more]
G4ZDJ3_PHYSP1.360e-4357.81RF_PROK_I domain-containing protein n=1 Tax=Phytop... [more]
W2QJH8_PHYPN1.710e-4361.98Peptide chain release factor 2 n=9 Tax=Phytophthor... [more]
H3GA21_PHYRM1.720e-4359.68RF_PROK_I domain-containing protein n=1 Tax=Phytop... [more]
A0A2P4X072_9STRA2.090e-4361.34Peptide chain release factor 2 n=1 Tax=Phytophthor... [more]
D0NMN6_PHYIT2.480e-4358.78Peptide chain release factor, putative n=2 Tax=Phy... [more]
K3WM13_GLOUD6.310e-4359.23RF_PROK_I domain-containing protein n=1 Tax=Globis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 1..95
e-value: 2.2E-31
score: 108.2
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 2..18
NoneNo IPR availableGENE3D3.30.70.1660coord: 59..130
e-value: 2.5E-8
score: 35.7
NoneNo IPR availableGENE3D3.30.160.20coord: 1..58
e-value: 3.3E-23
score: 83.4
NoneNo IPR availablePANTHERPTHR43116FAMILY NOT NAMEDcoord: 1..123
NoneNo IPR availablePANTHERPTHR43116:SF3PEPTIDE CHAIN RELEASE FACTOR PRFB1, CHLOROPLASTICcoord: 1..123
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 1..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1367contigE-siliculosus-1a_F_contig1367:31571..32668 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1367.2193.1mRNA_E-siliculosus-1a_F_contig1367.2193.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1367 31148..32719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1367.2193.1 ID=prot_E-siliculosus-1a_F_contig1367.2193.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=132bp
MRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRA
KIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQE
GDVSGVLDGGLDGFIDAALIAEHSKGGEEGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I