prot_E-siliculosus-1a_F_contig1367.2192.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1367.2192.1
Unique Nameprot_E-siliculosus-1a_F_contig1367.2192.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length333
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1367.2192.1 vs. uniprot
Match: D8LKZ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ8_ECTSI)

HSP 1 Score: 523 bits (1348), Expect = 1.890e-185
Identity = 311/333 (93.39%), Postives = 313/333 (93.99%), Query Frame = 0 
Query:    1 MSFNRGAVVSVQYRDRAWDIKLNSAVNTACLERDTATLALELQAALHLSTPPVGLRLCVAPGAQAVICPLSAVIACPSYIAT-YQGMSWFPLLEGGGDDHQEAPPNVPPATPQTQLPGPSSDDPLLPPPLGSPLDHELSFLATGGGFTASPSEGCGRPLTAPPGDRTRGMTGPRPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSHSGSPAWGSPHGFRCEDTTTTTPEDAGARRPATAPALRRQPSSNLSGSRNENGAFGERFGRGGSVEANEETGGVAAAHHGPMPDGGGLGEDGRAVGGDADWGWCGVGPARECWA 332
            MSFNRGAVVSVQY D AWDIKLN A NTACLERDTATLALELQAAL+LSTPPVGLRL VAPGAQAVICPLSAVIACPSYIAT YQGMSWFPLLEGGGDDHQEAPPN PPA PQTQLP P SDDPLLPPPLGSPLDHELSFLATGGGFTASPSEGCGRPLTAPPGDRTRGMT P PGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSHSGSPAWGSPHGFRCE+TTTTT EDAGARRPATAPALRRQPSSNLSGSRNENG FGERFGRGGSVE NEETGGVAAAHH PMPDGGGLG DGRAVGGD DWGWCG GP RECWA
Sbjct:    1 MSFNRGAVVSVQYGDCAWDIKLNLAANTACLERDTATLALELQAALNLSTPPVGLRLRVAPGAQAVICPLSAVIACPSYIATAYQGMSWFPLLEGGGDDHQEAPPNAPPAAPQTQLPAPPSDDPLLPPPLGSPLDHELSFLATGGGFTASPSEGCGRPLTAPPGDRTRGMTRPHPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSHSGSPAWGSPHGFRCEETTTTTAEDAGARRPATAPALRRQPSSNLSGSRNENGVFGERFGRGGSVEVNEETGGVAAAHHRPMPDGGGLGGDGRAVGGDVDWGWCGAGPTRECWA 333
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKZ8_ECTSI1.890e-18593.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1367contigE-siliculosus-1a_F_contig1367:28637..30257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1367.2192.1mRNA_E-siliculosus-1a_F_contig1367.2192.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1367 28077..30623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1367.2192.1 ID=prot_E-siliculosus-1a_F_contig1367.2192.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2192.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=333bp
MSFNRGAVVSVQYRDRAWDIKLNSAVNTACLERDTATLALELQAALHLST
PPVGLRLCVAPGAQAVICPLSAVIACPSYIATYQGMSWFPLLEGGGDDHQ
EAPPNVPPATPQTQLPGPSSDDPLLPPPLGSPLDHELSFLATGGGFTASP
SEGCGRPLTAPPGDRTRGMTGPRPGRREGLGRPMSATPSDKSFGMRRIRP
GKSEGFGRPVTALPSDHSHSGSPAWGSPHGFRCEDTTTTTPEDAGARRPA
TAPALRRQPSSNLSGSRNENGAFGERFGRGGSVEANEETGGVAAAHHGPM
PDGGGLGEDGRAVGGDADWGWCGVGPARECWA*
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