prot_E-siliculosus-1a_F_contig13653.2184.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13653.2184.1
Unique Nameprot_E-siliculosus-1a_F_contig13653.2184.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length82
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13653.2184.1 vs. uniprot
Match: A0A5B7SWR5_9FLAO (Uncharacterized protein n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SWR5_9FLAO)

HSP 1 Score: 104 bits (259), Expect = 1.220e-27
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 MKTYIVVFVLLVLNTSALLSEPILAFVKGVNLWLFVSVEIVLLVTFYINNQLKGLNEIAKIDLSGIDLFVVDSKNKTQGKS 81
            MKT IV+  L+VLNTSALLSEP+   VKG+N WL V+ EIVLL+  YINNQLKGL+EI+KIDLSGI+LFV+  K KT  KS
Sbjct:    1 MKTSIVLLALIVLNTSALLSEPLAVLVKGINPWLLVAFEIVLLLILYINNQLKGLHEISKIDLSGIELFVIKPKGKTDSKS 81          
BLAST of mRNA_E-siliculosus-1a_F_contig13653.2184.1 vs. uniprot
Match: A0A7K0E7X4_9FLAO (Uncharacterized protein n=1 Tax=Kriegella sp. EG-1 TaxID=2664451 RepID=A0A7K0E7X4_9FLAO)

HSP 1 Score: 89.0 bits (219), Expect = 1.510e-21
Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 0
Query:    1 MKTYIVVFVLLVLNTSALLSEPILAFVKGVNLWLFVSVEIVLLVTFYINNQLKGLNEIAKIDLSGIDLFVVDSKNKTQ 78
            MKT IV+  L++LNTSALLSEP+   VK +N W  V +E+VLL+ FY+NNQL+GLNE+A IDLS I+LFV+  K  ++
Sbjct:    1 MKTSIVLLFLIILNTSALLSEPLAVIVKDLNPWFLVVLEVVLLLFFYLNNQLRGLNELANIDLSDIELFVIKPKKNSK 78          
BLAST of mRNA_E-siliculosus-1a_F_contig13653.2184.1 vs. uniprot
Match: A0A7Y1TNQ8_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y1TNQ8_9FLAO)

HSP 1 Score: 74.3 bits (181), Expect = 8.050e-16
Identity = 34/75 (45.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    1 MKTYIVVFVLLVLNTSALLSEPILAFVKGVNLWLFVSVEIVLLVTFYINNQLKGLNEIAKIDLSGIDLFVVDSKN 75
            MKT I++  L+ +NTSA+L+EPI + +KGVN+WL +S+E +L++ +YIN+ ++ + ++++IDLS + LFVV  K+
Sbjct:    1 MKTSIILIALIFINTSAILAEPIASLLKGVNVWLLLSLEDLLIIGYYINSVVQNIRKVSEIDLSNLKLFVVKKKS 75          
BLAST of mRNA_E-siliculosus-1a_F_contig13653.2184.1 vs. uniprot
Match: A0A5B7TQS7_9FLAO (Uncharacterized protein n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A5B7TQS7_9FLAO)

HSP 1 Score: 59.3 bits (142), Expect = 6.610e-10
Identity = 30/74 (40.54%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    1 MKTYIVVFVLLVLNTSALLSEPILAFVKGVNLWLFVSVEIVLLVTFYINNQLKGLNEIAKIDLSGIDLFVVDSK 74
            MKT  ++ +L++ NTSALLSE I   V+ +N WLFV++EI+L++ +Y+N  +K + +    D + ++L V  SK
Sbjct:    1 MKTSALLIILILCNTSALLSESISHLVRDINPWLFVALEILLVLGYYLNKTIKEIRQTFDFDCNDLNLLVTKSK 74          
BLAST of mRNA_E-siliculosus-1a_F_contig13653.2184.1 vs. uniprot
Match: A0A5S3PZJ9_9FLAO (Uncharacterized protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PZJ9_9FLAO)

HSP 1 Score: 58.5 bits (140), Expect = 1.300e-9
Identity = 28/74 (37.84%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    1 MKTYIVVFVLLVLNTSALLSEPILAFVKGVNLWLFVSVEIVLLVTFYINNQLKGLNEIAKIDLSGIDLFVVDSK 74
            MKT +++   L+LNT+ L++EP+   VKG+N ++ + VE VL++ ++ N  L+ LN    +D   +++FVV SK
Sbjct:    1 MKTSMIIIAALLLNTTLLVAEPLSTIVKGINPFILIGVEAVLILGYFANKWLRELNRACTLDFGYLNIFVVKSK 74          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13653.2184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5B7SWR5_9FLAO1.220e-2767.90Uncharacterized protein n=1 Tax=Aggregatimonas san... [more]
A0A7K0E7X4_9FLAO1.510e-2157.69Uncharacterized protein n=1 Tax=Kriegella sp. EG-1... [more]
A0A7Y1TNQ8_9FLAO8.050e-1645.33Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
A0A5B7TQS7_9FLAO6.610e-1040.54Uncharacterized protein n=3 Tax=Flavobacteriaceae ... [more]
A0A5S3PZJ9_9FLAO1.300e-937.84Uncharacterized protein n=1 Tax=Maribacter algarum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..81
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.504
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 32..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13653contigE-siliculosus-1a_F_contig13653:307..552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13653.2184.1mRNA_E-siliculosus-1a_F_contig13653.2184.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13653 307..552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13653.2184.1 ID=prot_E-siliculosus-1a_F_contig13653.2184.1|Name=mRNA_E-siliculosus-1a_F_contig13653.2184.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=82bp
MKTYIVVFVLLVLNTSALLSEPILAFVKGVNLWLFVSVEIVLLVTFYINN
QLKGLNEIAKIDLSGIDLFVVDSKNKTQGKS*
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