prot_E-siliculosus-1a_F_contig1365.2181.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1365.2181.1
Unique Nameprot_E-siliculosus-1a_F_contig1365.2181.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length83
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 8.020e-54
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0
Query:    1 MGYKNLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82
            MGYK+LGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTL GHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK
Sbjct:    1 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLLGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 7.690e-49
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0
Query:    1 MGYKNLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82
            MGYK+LGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYS DFHPTEPKLVSSSADKTVLIWEPNRKRNSRK
Sbjct:  520 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSTDFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 601          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA)

HSP 1 Score: 124 bits (311), Expect = 5.340e-35
Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    1 MGYKNLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNR--KRNSRK 82
            +GY++ G DW HSLVLATGSADG+I+ FD+SKG+G ++QTLRGH DRVY+  FHPTEP+LVS SAD+TV IW P++  +RN RK
Sbjct:   41 IGYEDSGKDWAHSLVLATGSADGNIYTFDMSKGEGGDLQTLRGHNDRVYAVHFHPTEPRLVSGSADQTVRIWGPSKGGRRNGRK 124          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: R7QRT1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRT1_CHOCR)

HSP 1 Score: 82.0 bits (201), Expect = 2.190e-16
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    6 LGNDWQHSLVLATGSADGSIHVFDLS--KGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIWE 73
            +G   Q+SL+LA+GSADG+I +FD+    G G  +QTL GH+DRVY  DFHP EP L S SAD  + IW+
Sbjct:  482 IGGPIQNSLILASGSADGNICLFDVGGRPGTGALLQTLEGHKDRVYGVDFHPNEPILASCSADCGIKIWQ 551          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: A0A2V3IL28_9FLOR (WD repeat-containing protein 5B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL28_9FLOR)

HSP 1 Score: 81.6 bits (200), Expect = 2.990e-16
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    5 NLGNDWQHSLVLATGSADGSIHVFDL--SKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIW 72
            ++G+  + SLVLA+GSADG+++VFD+  S G G  +QTL GH+D  YS DFHP EP L S SAD  + IW
Sbjct:  483 SIGDAIESSLVLASGSADGNVYVFDVGGSAGTGTLVQTLIGHKDIAYSVDFHPCEPILASCSADSKINIW 552          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: A0A8H7Q4N1_MORIS (GED domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4N1_MORIS)

HSP 1 Score: 78.2 bits (191), Expect = 4.850e-15
Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 0
Query:   11 QHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82
            + S++LATGS+D  ++++++ +   + +Q L GH DRVY+A+FHPTEP L S SAD T+ +W P   R  +K
Sbjct:  422 EKSVLLATGSSDPYVYLYNIGENTAELMQRLEGHTDRVYAANFHPTEPILASCSADYTIKVWGPGAPRGKKK 493          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: A0A168T094_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T094_ABSGL)

HSP 1 Score: 77.4 bits (189), Expect = 9.130e-15
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0
Query:   11 QHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPN 75
            + S++LATGSAD  ++++++ + + + +Q + GH DRVYS +FHPTEP L S SAD TV IW P+
Sbjct:  439 EKSVLLATGSADPYVYLYNVGEDRSELMQRMEGHTDRVYSVNFHPTEPILASGSADFTVKIWGPS 503          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 73.9 bits (180), Expect = 1.510e-13
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0
Query:   14 LVLATGSADGSIHVFDLS-------KGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKR 78
            ++LATGSAD +I++ D++        G    +Q L GH DRVYS DFHP+EP L S+SAD TV IW P   R
Sbjct:  422 MLLATGSADNTIYLHDVTCRRGYGLNGSTSLLQRLEGHTDRVYSVDFHPSEPILASASADFTVKIWLPRTSR 493          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: A0A2P6MV32_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MV32_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 5.330e-13
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   13 SLVLATGSADGSIHVFDLSKGQGDEI--QTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIW 72
            S +LATGSAD  +++F++S  +G  I  Q L GH D+VYS +FHP +P L S+SAD TV +W
Sbjct:  488 SFLLATGSADSQVYIFNVSGVEGSHILLQRLEGHTDKVYSVNFHPFDPILASASADGTVRLW 549          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Match: A0A1Y2GT49_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GT49_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 3.480e-12
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0
Query:   11 QHSLVLATGSADGSIHVFDLSKGQG--DEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVLIW 72
            + SL+LA+GS D  +++FD+S G G  + +Q L GH DRVY  DFHP +  L S SAD TV +W
Sbjct:  521 ESSLLLASGSMDPYVYLFDVSAGDGQYELLQKLPGHTDRVYDVDFHPIDHVLASGSADFTVKVW 584          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF6_ECTSI8.020e-5497.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNQ7_9PHAE7.690e-4997.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z281_9STRA5.340e-3565.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
R7QRT1_CHOCR2.190e-1654.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IL28_9FLOR2.990e-1654.29WD repeat-containing protein 5B n=1 Tax=Gracilario... [more]
A0A8H7Q4N1_MORIS4.850e-1544.44GED domain-containing protein n=1 Tax=Mortierella ... [more]
A0A168T094_ABSGL9.130e-1549.23Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]
T0QW05_SAPDV1.510e-1350.00Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A2P6MV32_9EUKA5.330e-1351.61Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A1Y2GT49_9FUNG3.480e-1250.00WD40-repeat-containing domain protein n=1 Tax=Lobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 34..73
e-value: 4.7E-9
score: 46.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 36..72
e-value: 2.5E-7
score: 31.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 41..82
score: 13.984
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 9..82
e-value: 4.2E-19
score: 70.6
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 14..76
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 16..82
score: 15.056
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 13..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1365contigE-siliculosus-1a_F_contig1365:2844..3778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1365.2181.1mRNA_E-siliculosus-1a_F_contig1365.2181.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1365 2844..4149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1365.2181.1 ID=prot_E-siliculosus-1a_F_contig1365.2181.1|Name=mRNA_E-siliculosus-1a_F_contig1365.2181.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=83bp
MGYKNLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYS
ADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat