prot_E-siliculosus-1a_F_contig1362.2163.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1362.2163.1
Unique Nameprot_E-siliculosus-1a_F_contig1362.2163.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length291
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: A0A6H5L7W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W2_9PHAE)

HSP 1 Score: 558 bits (1437), Expect = 2.010e-200
Identity = 282/289 (97.58%), Postives = 289/289 (100.00%), Query Frame = 0
Query:    1 MSDLGGASGKPTGTTSREVRRVTNPYLDSRSNNGSSSTAGGIRQMHNRNPSVPSEFGSNAEAAERRRGQAPPPAPGPSSKIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRLKRNRTE 289
            MSD+GGASGKPTGTTSREVRRVTNPYLDSRS+NGSSSTAGGIRQMHNRNPSVPSEFGSNAEAAERRRGQAPPPAPGPS+KIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQR+KELSGHFTLRVLLCHVDVDDSETP+LEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKV+RIHEALHEPLVRKHSSSRL+RNRTE
Sbjct:    1 MSDVGGASGKPTGTTSREVRRVTNPYLDSRSSNGSSSTAGGIRQMHNRNPSVPSEFGSNAEAAERRRGQAPPPAPGPSNKIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRIKELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVSRIHEALHEPLVRKHSSSRLERNRTE 289          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: D7G4P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P9_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 1.900e-101
Identity = 151/153 (98.69%), Postives = 153/153 (100.00%), Query Frame = 0
Query:  138 MKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRLKRNRTEG 290
            M+ELSGHFTLRVLLCHVDVDDSETP+LEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRLKRNRTEG
Sbjct:   10 MQELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRLKRNRTEG 162          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: J3N456_ORYBR (HHH_2 domain-containing protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3N456_ORYBR)

HSP 1 Score: 213 bits (543), Expect = 1.780e-63
Identity = 102/206 (49.51%), Postives = 145/206 (70.39%), Query Frame = 0
Query:   74 APGPSSKIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHS 279
            AP P + I V  RQ+ N +L+H+RN  +     +V D+VLG  +CA+++S+RYHLL+P YL  R++EL  +F LRV+LCH+DV+D   P+ E+ + A+ +D TL+  WSL+E  RYLET K YE+KSADSI+E +D+D+L +L      +R VNK+DV+TL SNFGSL  V +A+  EL+ CPG+GE+KV R+H+  HEP  R  S
Sbjct:   94 APAPKNAILVSHRQKGNPLLKHIRNARWTFAD-VVPDYVLGQSSCALYLSVRYHLLHPDYLYYRIRELQKNFKLRVILCHIDVEDVVKPLHEVTRTAILHDCTLLCGWSLEECGRYLETIKVYENKSADSIREHMDNDYLSRLTHALTSIRHVNKTDVVTLGSNFGSLSQVMNASMEELARCPGIGERKVKRLHDTFHEPFKRASS 298          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: M4FED2_BRARP (Uncharacterized protein n=5 Tax=Brassicaceae TaxID=3700 RepID=M4FED2_BRARP)

HSP 1 Score: 211 bits (537), Expect = 2.090e-62
Identity = 104/204 (50.98%), Postives = 145/204 (71.08%), Query Frame = 0
Query:   77 PSSKIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSS 280
            P + I V  RQ+ N +L+H+RNV + +   ++ D++LG  TCA+++SLRYHLL+P YL  R++EL  +F LRV+LCHVDV+DS  P+LE+ K A+ +D TL+ AWSL E ARYLET K YE+K AD IQ ++D D+L +L      +R VNKSDV+TL S FGSL  + DA+  +L+ CPG+GE+KV R+++  HEP  R  SS
Sbjct:  117 PRNAILVSNRQKGNPLLKHIRNVKW-VFSDIIPDYLLGQTTCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCHVDVEDSVKPLLEVTKTALLHDCTLLCAWSLTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRAASS 319          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: A0A1D1ZHX7_9ARAE (DNA excision repair protein ERCC-1 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZHX7_9ARAE)

HSP 1 Score: 208 bits (529), Expect = 2.090e-62
Identity = 99/203 (48.77%), Postives = 144/203 (70.94%), Query Frame = 0
Query:   81 IQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRL 283
            I V  RQ+ N +L+H+RNV +     +V D++LG  +CA++ISLRYHLL+P Y+  R++EL  +F LRV+LCH+DV+D   P+LE+ + A+ +D +L+  WSL+E  RYLET K YE+KSADSI+E++D D+L +L      +R VNK+DV+TL S FGSL  + DA+  EL+ CPG+GE+KV R+++  HEP  R  S S +
Sbjct:   16 ILVSHRQKGNPLLKHIRNVRWTFAD-VVCDYLLGQNSCALYISLRYHLLHPDYVYYRIRELQKNFKLRVVLCHIDVEDVAKPLLEVTRTALLHDCSLLCGWSLEECGRYLETIKVYENKSADSIREQMDTDYLSRLTHALTTIRHVNKTDVVTLGSAFGSLSRIMDASMEELARCPGIGERKVQRLYDTFHEPFRRTSSQSTI 217          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: A0A6J0NQ48_RAPSA (DNA excision repair protein ERCC-1 n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0NQ48_RAPSA)

HSP 1 Score: 211 bits (538), Expect = 2.130e-62
Identity = 106/213 (49.77%), Postives = 147/213 (69.01%), Query Frame = 0
Query:   68 GQAPPPAPGPSSKIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSS 280
            G  P     P + I V  RQ+ N +L+H+RNV + +   ++ D++LG  TCA+++SLRYHLL+P YL  R++EL  +F LRV+LCHVDV+DS  P+LE+ K A+ +D TL+ AWSL E ARYLET K YE+K AD IQ ++D D+L +L      +R VNKSDV+TL S FGSL  + DA+  +L+ CPG+GE+KV R+++  HEP  R  SS
Sbjct:  113 GSLPSNTTQPRNAILVSNRQKGNPLLKHIRNVKW-VYSDIIPDYLLGQTTCALYLSLRYHLLHPDYLYFRIRELQRNFKLRVVLCHVDVEDSVKPLLEVTKTALLHDCTLLCAWSLTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRAASS 324          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: A0A0D9XLL6_9ORYZ (HHH_2 domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9XLL6_9ORYZ)

HSP 1 Score: 211 bits (536), Expect = 2.260e-62
Identity = 102/207 (49.28%), Postives = 145/207 (70.05%), Query Frame = 0
Query:   77 PSSKIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRL 283
            P + I V  RQ+ N +L+H+RN  +     +V D+VLG  +CA++ISLRYHLL+P YL  R+KEL  +F LRV+LCH+DV+D   P+ E+ + A+ +D TL+  WSL+E  RYLET K YE+KSADSI+E +D+D+L +L      +R VNK+DV+TL S+FGSL  V +A+  EL+ CPG+GE+KV R+H+  HEP  R  S + +
Sbjct:  105 PKNAILVSHRQKGNPLLKHIRNARWTYAD-IVPDYVLGQSSCALYISLRYHLLHPDYLYYRIKELQKNFKLRVILCHIDVEDVVKPLHEVTRTALLHDCTLLCGWSLEECGRYLETIKVYENKSADSIREHMDNDYLSRLTHALTSIRHVNKTDVVTLGSSFGSLSQVMNASMEELARCPGIGERKVKRLHDTFHEPFKRASSRTNI 310          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: A0A835ZCX2_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX2_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.310e-62
Identity = 98/179 (54.75%), Postives = 134/179 (74.86%), Query Frame = 0
Query:   96 LRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPL 274
            +RNV +E   G++ DFV+ P  CA+F+S+RYH L P Y+ QR++EL   F LR+LL  VD DD+   +LE+NKMAV  +FTL+LAWS  EAARYLET+KA+E+K   SIQEKV+ D+L K QD    V +VN++DV+TL S FGSL+ +C+A+  E++LCPGLG+KKV  +H+ALH+P 
Sbjct:    7 IRNVEYEFATGIMPDFVISPTACALFLSMRYHQLKPTYIAQRIEELRTSFRLRLLLVLVDQDDNVNLLLELNKMAVARNFTLLLAWSWPEAARYLETFKAFENKPPTSIQEKVNSDYLAKAQDALCTVHAVNRTDVVTLLSTFGSLQGLCEASMEEMALCPGLGDKKVVALHDALHQPF 185          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: A0A078GQT9_BRANA ((rape) hypothetical protein n=6 Tax=Brassicaceae TaxID=3700 RepID=A0A078GQT9_BRANA)

HSP 1 Score: 211 bits (536), Expect = 3.180e-62
Identity = 104/204 (50.98%), Postives = 145/204 (71.08%), Query Frame = 0
Query:   77 PSSKIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSS 280
            P + I V  RQ+ N +L+H+RNV +  +  ++ D++LG  TCA+++SLRYHLL+P YL  R++EL  +F LRV+LCHVDV+DS  P+LE+ K A+ +D TL+ AWSL E ARYLET K YE+K AD IQ ++D D+L +L      +R VNKSDV+TL S FGSL  + DA+  +L+ CPG+GE+KV R+++  HEP  R  SS
Sbjct:  118 PRNAILVSNRQKGNPLLKHIRNVKWVFSE-IIPDYLLGQTTCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCHVDVEDSVKPLLEVTKTALLHDCTLLCAWSLTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRAASS 320          
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Match: A0A5C7I906_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7I906_9ROSI)

HSP 1 Score: 210 bits (535), Expect = 3.740e-62
Identity = 101/196 (51.53%), Postives = 140/196 (71.43%), Query Frame = 0
Query:   81 IQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVLLCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVR 276
            I V  RQ+ N +L+H+RNV +     +V D++LG  +CA+++SLRYHLL+P YL  R++EL  +F LRV+LCH+DVDD   P+LE+ K A+ +D TL+ AWSL+E  RYLET K YE+K AD IQ ++D D+L +L      VRSVNK+DV+TL S FGSL  + DA+  +L+ CPG+GE+KV R+H+  HEP  R
Sbjct:  103 ILVSHRQKGNPLLKHIRNVRWAFAD-VVCDYMLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHIDVDDVVKPLLEVTKTAMLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDSDYLSRLTHSLTTVRSVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLHDTFHEPFKR 297          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7W2_9PHAE2.010e-20097.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4P9_ECTSI1.900e-10198.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
J3N456_ORYBR1.780e-6349.51HHH_2 domain-containing protein n=1 Tax=Oryza brac... [more]
M4FED2_BRARP2.090e-6250.98Uncharacterized protein n=5 Tax=Brassicaceae TaxID... [more]
A0A1D1ZHX7_9ARAE2.090e-6248.77DNA excision repair protein ERCC-1 n=1 Tax=Anthuri... [more]
A0A6J0NQ48_RAPSA2.130e-6249.77DNA excision repair protein ERCC-1 n=1 Tax=Raphanu... [more]
A0A0D9XLL6_9ORYZ2.260e-6249.28HHH_2 domain-containing protein n=1 Tax=Leersia pe... [more]
A0A835ZCX2_9STRA2.310e-6254.75Restriction endonuclease type II-like protein n=1 ... [more]
A0A078GQT9_BRANA3.180e-6250.98(rape) hypothetical protein n=6 Tax=Brassicaceae T... [more]
A0A5C7I906_9ROSI3.740e-6251.53Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004579ERCC1/RAD10/SWI10 familyTIGRFAMTIGR00597TIGR00597coord: 81..191
e-value: 2.0E-35
score: 119.1
IPR004579ERCC1/RAD10/SWI10 familyPFAMPF03834Rad10coord: 81..194
e-value: 6.1E-40
score: 135.8
IPR004579ERCC1/RAD10/SWI10 familyPANTHERPTHR12749EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1coord: 45..282
NoneNo IPR availableGENE3D1.10.150.20coord: 196..287
e-value: 2.5E-26
score: 93.0
NoneNo IPR availablePFAMPF14520HHH_5coord: 225..271
e-value: 1.6E-6
score: 28.6
NoneNo IPR availableGENE3D3.40.50.10130coord: 79..195
e-value: 2.0E-42
score: 145.5
NoneNo IPR availablePRODOMPD013585coord: 81..204
e-value: 3.0E-31
score: 338.0
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 80..207
IPR010994RuvA domain 2-likeSUPERFAMILY47781RuvA domain 2-likecoord: 171..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1362contigE-siliculosus-1a_F_contig1362:5759..9095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1362.2163.1mRNA_E-siliculosus-1a_F_contig1362.2163.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1362 4976..9196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1362.2163.1 ID=prot_E-siliculosus-1a_F_contig1362.2163.1|Name=mRNA_E-siliculosus-1a_F_contig1362.2163.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=291bp
MSDLGGASGKPTGTTSREVRRVTNPYLDSRSNNGSSSTAGGIRQMHNRNP
SVPSEFGSNAEAAERRRGQAPPPAPGPSSKIQVHKRQEKNSMLRHLRNVA
FEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRMKELSGHFTLRVL
LCHVDVDDSETPMLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKS
ADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAG
ELSLCPGLGEKKVARIHEALHEPLVRKHSSSRLKRNRTEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010994RuvA_2-like
IPR011335Restrct_endonuc-II-like
IPR004579ERCC1/RAD10/SWI10