prot_E-siliculosus-1a_F_contig13603.2156.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13603.2156.1
Unique Nameprot_E-siliculosus-1a_F_contig13603.2156.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length62
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Match: UPI00110B01FA (hypothetical protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=UPI00110B01FA)

HSP 1 Score: 91.7 bits (226), Expect = 3.470e-23
Identity = 37/61 (60.66%), Postives = 56/61 (91.80%), Query Frame = 0
Query:    1 MIFRVLIIIVILGLVYYLYRIITGNSEYRKCQKCNGQGYWKATRGERDKCDICKGSGKVLR 61
            MIFR+L++++I+GL  +L R+++  SEY+KCQKC+G+GYW+AT+GE+DKCD+C+G+GKVLR
Sbjct:    1 MIFRILMLLLIIGLAIFLIRMVSNTSEYKKCQKCDGKGYWRATKGEKDKCDVCQGAGKVLR 61          
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Match: A0A554VG66_9FLAO (Uncharacterized protein n=1 Tax=Aquimarina algiphila TaxID=2047982 RepID=A0A554VG66_9FLAO)

HSP 1 Score: 82.4 bits (202), Expect = 1.630e-19
Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    1 MIFRVLIIIVILGLVYYLYRIITGNSEYRKCQKCNGQGYWKATRGERDKCDICKGSGKVLR 61
            MIFR+L+I + +   YY+ R + GNSEY+ C+KC+G+GYW A RGE+DKCDICKGSG++ R
Sbjct:    1 MIFRLLVIFLAIAGAYYIIRNVFGNSEYKSCKKCDGKGYWIAMRGEKDKCDICKGSGRIPR 61          
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Match: UPI0003795E3B (hypothetical protein n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI0003795E3B)

HSP 1 Score: 58.9 bits (141), Expect = 3.040e-10
Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 MIFRVLIIIVILGLVYYLYRIITGNSEYRKCQKCNGQGYWKATRGERDKCDICKGSGKV 59
            M+FR+L +++I  + YYL+ ++ G     KC  C+G GYW+ TRGE++ C  C G+GK 
Sbjct:    1 MLFRLLWLVLIGAVAYYLFNLLVGLVNANKCSYCDGHGYWEGTRGEKNFCKTCNGTGKA 59          
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Match: UPI000472D41D (hypothetical protein n=1 Tax=Aquimarina pacifica TaxID=1296415 RepID=UPI000472D41D)

HSP 1 Score: 58.5 bits (140), Expect = 5.890e-10
Identity = 28/68 (41.18%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    1 MIFRVLIIIVILGLVYYLYRIITGNSEYR---------KCQKCNGQGYWKATRGERDKCDICKGSGKV 59
            MIFR+L++  ++  ++YL + +   ++ +         KC+KCNG GYW ATRGE++KC++C GSGK+
Sbjct:    1 MIFRILLLTAVVYGIFYLIKKVKPINKLKEVRLKFDPLKCRKCNGMGYWIATRGEKEKCNLCWGSGKM 68          
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Match: A0A8J5D606_9CHEL (Thioredoxin 1 n=2 Tax=cellular organisms TaxID=131567 RepID=A0A8J5D606_9CHEL)

HSP 1 Score: 61.6 bits (148), Expect = 1.380e-9
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0
Query:   11 ILGLVYYLYRIITGNSEYRKCQKCNGQGYWKATRGERDKCDICK 54
            +LG V Y  R   GN EYRKC KC G+G+WK  RGE++KCD+CK
Sbjct:   76 VLGAVIYFIRAY-GNKEYRKCGKCEGKGFWKGLRGEKEKCDVCK 118          
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Match: A0A6N4EBF6_9RHOO (Uncharacterized protein n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A6N4EBF6_9RHOO)

HSP 1 Score: 56.6 bits (135), Expect = 3.160e-9
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    3 FRVLIIIVILGLVYYLYRIITGNSEYRKCQKCNGQGYWKATRGERDKCDICKGSGKVLR 61
            FR+LI+   + LVY+L +  T  SE+ KC +C G+G+W A RG+ + CD C+GSGK+ R
Sbjct:    6 FRLLILGGFIALVYFLIKSFTTPSEFVKCGRCEGKGFWYAARGK-ETCDWCRGSGKLPR 63          
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Match: A0A1H9KRJ9_9BACT (Uncharacterized protein n=1 Tax=Lewinella agarilytica TaxID=478744 RepID=A0A1H9KRJ9_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 2.350e-8
Identity = 20/56 (35.71%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    4 RVLIIIVILGLVYYLYRIITGNSEYRKCQKCNGQGYWKATRGERDKCDICKGSGKV 59
            R++I+ + LG + +L +++  +   +KC  C G+GYW  TRG+R+ C +C G+G++
Sbjct:    9 RIIIVFLFLGGLLFLGKLVVNSLNTKKCNNCKGKGYWIGTRGDRNNCKVCDGTGQL 64          
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Match: UPI00069774F1 (hypothetical protein n=1 Tax=Aureispira sp. CCB-QB1 TaxID=1313421 RepID=UPI00069774F1)

HSP 1 Score: 46.6 bits (109), Expect = 2.310e-5
Identity = 21/58 (36.21%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    4 RVLIIIVILGLVYYLYRIITGNSEYRK--CQKCNGQGYWKATRGERDKCDICKGSGKV 59
            +VL+ + I+G + +   II  NS+  +  C++C G+G+W+  RGER+ C  C G+G +
Sbjct:    2 KVLLFVAIVGAIIF---IIINNSQSNQYICERCEGKGFWRGLRGERNNCKACDGTGYI 56          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13603.2156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
UPI00110B01FA3.470e-2360.66hypothetical protein n=1 Tax=Maribacter algarum Ta... [more]
A0A554VG66_9FLAO1.630e-1959.02Uncharacterized protein n=1 Tax=Aquimarina algiphi... [more]
UPI0003795E3B3.040e-1042.37hypothetical protein n=1 Tax=Lewinella cohaerens T... [more]
UPI000472D41D5.890e-1041.18hypothetical protein n=1 Tax=Aquimarina pacifica T... [more]
A0A8J5D606_9CHEL1.380e-959.09Thioredoxin 1 n=2 Tax=cellular organisms TaxID=131... [more]
A0A6N4EBF6_9RHOO3.160e-947.46Uncharacterized protein n=1 Tax=Azospira oryzae Ta... [more]
A0A1H9KRJ9_9BACT2.350e-835.71Uncharacterized protein n=1 Tax=Lewinella agarilyt... [more]
UPI00069774F12.310e-536.21hypothetical protein n=1 Tax=Aureispira sp. CCB-QB... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.230.20coord: 21..61
e-value: 4.6E-5
score: 25.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 29..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13603contigE-siliculosus-1a_F_contig13603:83..268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13603.2156.1mRNA_E-siliculosus-1a_F_contig13603.2156.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13603 83..268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13603.2156.1 ID=prot_E-siliculosus-1a_F_contig13603.2156.1|Name=mRNA_E-siliculosus-1a_F_contig13603.2156.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=62bp
MIFRVLIIIVILGLVYYLYRIITGNSEYRKCQKCNGQGYWKATRGERDKC
DICKGSGKVLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf