prot_E-siliculosus-1a_F_contig13594.2142.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13594.2142.1
Unique Nameprot_E-siliculosus-1a_F_contig13594.2142.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length253
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13594.2142.1 vs. uniprot
Match: A0A6H5KV31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV31_9PHAE)

HSP 1 Score: 499 bits (1286), Expect = 4.230e-177
Identity = 247/253 (97.63%), Postives = 248/253 (98.02%), Query Frame = 0
Query:    1 AKIPLVLEGDAPAKSPMGEMMQYAADQRVARLGYIGKTSGRGPLALTPDLTDAWRTGAVTDQQLRDTLNGGTFTIDNTEENKSTDRTCYATLENDTVTAMIREGTRMGELCFPRRGNHQRCGRLTGNSADGVAWSGSECMLFAKDGGMTNPHVDVQSVPGGTGRIIHMPAAGVIRRVNHDDAQGPAKQAIVVHADDMSRVIETLQINTGKESASQYGGPPRTLPEFARVLRNEGIRFVVINFPVRCSYALPAR 253
            AKIPLVLEGDAP KSPMGEMMQYAADQRVARLGYIGKTSGRGPLALTPDLTDAWRTGAVTDQQLRDTLNGGTFTIDNTEENKS DRTCYAT+ENDTVTAMIREGTRMGELCFPRRGNHQRCGRLTGNSADGVAWSGSECMLFAKDGGMTNPHVDVQSVPGGTG IIHMPAAGVIRRVNH DAQGPAKQAIVVHADDMSRVIETLQINTGKESASQYGGPPRTL EFARVLRNEGIRFVVINFPVRCSYALPAR
Sbjct:   72 AKIPLVLEGDAPPKSPMGEMMQYAADQRVARLGYIGKTSGRGPLALTPDLTDAWRTGAVTDQQLRDTLNGGTFTIDNTEENKSRDRTCYATMENDTVTAMIREGTRMGELCFPRRGNHQRCGRLTGNSADGVAWSGSECMLFAKDGGMTNPHVDVQSVPGGTGTIIHMPAAGVIRRVNHADAQGPAKQAIVVHADDMSRVIETLQINTGKESASQYGGPPRTLTEFARVLRNEGIRFVVINFPVRCSYALPAR 324          
BLAST of mRNA_E-siliculosus-1a_F_contig13594.2142.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 1.320e-151
Identity = 222/253 (87.75%), Postives = 235/253 (92.89%), Query Frame = 0
Query:    1 AKIPLVLEGDAPAKSPMGEMMQYAADQRVARLGYIGKTSGRGPLALTPDLTDAWRTGAVTDQQLRDTLNGGTFTIDNTEENKSTDRTCYATLENDTVTAMIREGTRMGELCFPRRGNHQRCGRLTGNSADGVAWSGSECMLFAKDGGMTNPHVDVQSVPGGTGRIIHMPAAGVIRRVNHDDAQGPAKQAIVVHADDMSRVIETLQINTGKESASQYGGPPRTLPEFARVLRNEGIRFVVINFPVRCSYALPAR 253
            A IPLVLEGDAPA+SPMGEMMQYAA + VAR+GYIGKTSGRGPL L P LTDAWRTGAVTD+QLRDTLNGGTFTIDNTEENK TD+TCYATLENDTVTAMIREGTRMGELCFPRRGNH + G LTG  ADGVAWSGSECMLFAKDGGMTNPHVDVQSVPGGTGRIIHMPAAGVIRRVN+ +   PAKQAIVVHADDMSRVIETL+INT KESASQYGGPPRTLPEFARVL+++GIRFVV+NFP RCSYALPAR
Sbjct:  314 AAIPLVLEGDAPAQSPMGEMMQYAAGKGVARIGYIGKTSGRGPLKLAPGLTDAWRTGAVTDKQLRDTLNGGTFTIDNTEENKRTDKTCYATLENDTVTAMIREGTRMGELCFPRRGNHLQYGTLTGKEADGVAWSGSECMLFAKDGGMTNPHVDVQSVPGGTGRIIHMPAAGVIRRVNYVEENRPAKQAIVVHADDMSRVIETLKINTKKESASQYGGPPRTLPEFARVLKSKGIRFVVMNFPSRCSYALPAR 566          
BLAST of mRNA_E-siliculosus-1a_F_contig13594.2142.1 vs. uniprot
Match: D7G2S5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S5_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 9.550e-40
Identity = 100/256 (39.06%), Postives = 143/256 (55.86%), Query Frame = 0
Query:    1 AKIPLVLEGDAPAKSPMGEMMQYAADQRVARLGYIGKTSGRGPLALTPDLTDAWRTGAVTDQQLRDTLNGG-TFTIDNTEENKSTDRTCYATLENDTVTAMIREGTRMGELCFPRRGNHQRCGRLTGN-SADGVAWSGSECMLFA-KDGGMTNPHVDVQSVPGGTGRIIHMPAAGVIRRVNHDDAQGPAKQAIVVHADDMSRVIETLQINTGKESASQYGGPPRTLPEFARVLRNEGIRFVVINFPVRCSYALPAR 253
            A  P++ EGD   +S MG   + A  + + R+G +G  +G     ++P   ++W  G +   +L+       T+T  N EE+   D   + T+E    + ++R  TRMG LC P R    R G LTG  S  G +WSGSE   FA + GG+T+ HVD Q V G     +++PAAG +R VN   + GPAK+AI++ A DM RV++ L ++  K S+SQY G    L   A  LR   IRFVV++FP  CSYA+PAR
Sbjct:  347 AHFPVIFEGDDTYRSVMGTACKSALARNLTRIGGLGGRNGTSMFGVSPSFVESWNEGVIDGDELKKAFGTNPTWTTQNFEEDDKVDVLSFNTIECVGASDLVRN-TRMGGLCHPDR-PPTRGGVLTGTTSVRGKSWSGSEVTAFAMRTGGVTHSHVDPQMVHG---EHLYLPAAGTMRSVNRRGS-GPAKRAILMCAHDMDRVVDLLGLDVNKPSSSQYTGAIVDLEGLATRLRVNSIRFVVVDFPEYCSYAIPAR 596          
BLAST of mRNA_E-siliculosus-1a_F_contig13594.2142.1 vs. uniprot
Match: UPI0000161E52 (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E52)

HSP 1 Score: 140 bits (352), Expect = 1.380e-34
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 0
Query:    1 AKIPLVLEGDAPAKSPMGEMMQYAADQRVARLGYIGKTSGRGPLALTPDLTDAWRTGAVTDQQLRDTLNGGTFTIDNTE 79
            A+IPLVLEGDAP KSPMGEMM+YAA + VAR+GYIGKTSGRGPL LTPDLTDAWR GAV+D+QLRDTLNGGTFTIDNTE
Sbjct:  466 AQIPLVLEGDAPEKSPMGEMMKYAAGKGVARIGYIGKTSGRGPLTLTPDLTDAWRIGAVSDKQLRDTLNGGTFTIDNTE 544          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13594.2142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KV31_9PHAE4.230e-17797.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP46_ECTSI1.320e-15187.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2S5_ECTSI9.550e-4039.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0000161E521.380e-3486.08hypothetical protein n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13594contigE-siliculosus-1a_F_contig13594:382..1273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13594.2142.1mRNA_E-siliculosus-1a_F_contig13594.2142.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13594 382..1273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13594.2142.1 ID=prot_E-siliculosus-1a_F_contig13594.2142.1|Name=mRNA_E-siliculosus-1a_F_contig13594.2142.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=253bp
AKIPLVLEGDAPAKSPMGEMMQYAADQRVARLGYIGKTSGRGPLALTPDL
TDAWRTGAVTDQQLRDTLNGGTFTIDNTEENKSTDRTCYATLENDTVTAM
IREGTRMGELCFPRRGNHQRCGRLTGNSADGVAWSGSECMLFAKDGGMTN
PHVDVQSVPGGTGRIIHMPAAGVIRRVNHDDAQGPAKQAIVVHADDMSRV
IETLQINTGKESASQYGGPPRTLPEFARVLRNEGIRFVVINFPVRCSYAL
PAR
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