prot_E-siliculosus-1a_F_contig1359.2140.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1359.2140.1
Unique Name	prot_E-siliculosus-1a_F_contig1359.2140.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	204

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: D8LIL8_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL8_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 1.270e-137
Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0

Query:    1 MMAKTLLCGLVTLLPAALGFVVPTASSSAFARGTGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            MMAKTLLCGLVTLLPAALGFV+PTASSSAFARG+GVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV RNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE
Sbjct:    1 MMAKTLLCGLVTLLPAALGFVMPTASSSAFARGSGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVWRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A836CHD7_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD7_9STRA)

HSP 1 Score: 256 bits (653), Expect = 5.100e-84
Identity = 130/187 (69.52%), Postives = 152/187 (81.28%), Query Frame = 0

Query:   17 ALGFVVPTASSSAFARGTGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            A+ FV P+        G  V H +AT+  S  ++ TMAMERSYIMIKPDGVQRGLVG+II+RFE+RGYKLA +KLKQADE LLK+HY+DL  KPFFPKL+ YM+SGPVVCM WEGKDVVA GRKMLG TNPL SAPGTIRGDF L+VGRNICHGSDSV++  +E  LWF  AE+VD+ESA++DWIYE
Sbjct:   14 AMAFVAPSFM------GAQVQHRAATS--SIQTQWTMAMERSYIMIKPDGVQRGLVGEIISRFEKRGYKLAAMKLKQADEDLLKEHYRDLASKPFFPKLMGYMLSGPVVCMCWEGKDVVAQGRKMLGATNPLESAPGTIRGDFSLDVGRNICHGSDSVDSGKRESELWFSPAEIVDNESALKDWIYE 192

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7R9VG66_9STRA (Nucleoside diphosphate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VG66_9STRA)

HSP 1 Score: 240 bits (613), Expect = 2.960e-78
Identity = 112/157 (71.34%), Postives = 133/157 (84.71%), Query Frame = 0

Query:   47 AVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            A S  +MAMER+YIMIKPDGVQRG+VG I++RFE +GY L  +K K A + LL++HYKDLV+KPFFPKL  YM+SGPVVCM WEG++ V+ GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA+KEI LWF E+E++D ES  +DWIYE
Sbjct:   14 ASSSLSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYHLVAMKTKMASKELLEEHYKDLVEKPFFPKLRDYMLSGPVVCMVWEGREAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIGLWFEESEILDWESHSKDWIYE 170

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A1Z5J7R9_FISSO (Nucleoside diphosphate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7R9_FISSO)

HSP 1 Score: 238 bits (607), Expect = 4.130e-77
Identity = 113/159 (71.07%), Postives = 132/159 (83.02%), Query Frame = 0

Query:   45 PSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            P +V+  +MAMER+YIMIKPDGVQRG+VG II+RFE +GYKL  +K + A + LL+KHY DL  KPFFPKL  YM+SGPVV M WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA+KEIALWF E+EV+D ES  Q W+YE
Sbjct:   28 PRSVNSLSMAMERTYIMIKPDGVQRGIVGNIISRFETKGYKLVAMKTRMATKELLEKHYADLTSKPFFPKLRDYMLSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENANKEIALWFDESEVLDWESHSQSWLYE 186

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7S2EER7_TRICV (Nucleoside diphosphate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EER7_TRICV)

HSP 1 Score: 239 bits (611), Expect = 5.310e-77
Identity = 115/165 (69.70%), Postives = 134/165 (81.21%), Query Frame = 0

Query:   39 VSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            V+A  A S+ +  +MAMER+YIMIKPDGVQRG+VG I++RFE +GY L  LK K A   LL +HYKDLVDKPFFPKL  YM+SGPVVCM WEGK+ V  GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA++EI LWF E+EV++ E   +DWIYE
Sbjct:   72 VAAPVAKSSATELSMAMERTYIMIKPDGVQRGIVGNILSRFESKGYHLVALKTKMATAELLDQHYKDLVDKPFFPKLRDYMLSGPVVCMVWEGKEAVTTGRKMLGATNPLESAPGTIRGDFCVEVGRNICHGSDSVENAEREIGLWFEESEVLEWEDHSKDWIYE 236

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: B7FPE8_PHATC (Nucleoside diphosphate kinase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPE8_PHATC)

HSP 1 Score: 236 bits (603), Expect = 5.380e-77
Identity = 111/150 (74.00%), Postives = 126/150 (84.00%), Query Frame = 0

Query:   54 AMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            A ER+YIMIKPDG+QRG+VG I+ RFE +GYKL  +K KQA   LL+ HYKDLVDKPFFPKL  YM+SGPVV M WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA+KEIALWF E E++D ES  +DWIYE
Sbjct:    3 ASERTYIMIKPDGIQRGIVGNIVNRFETKGYKLVAMKTKQATSELLETHYKDLVDKPFFPKLKEYMMSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEEDEILDWESHSKDWIYE 152

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: B8C642_THAPS (Nucleoside diphosphate kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C642_THAPS)

HSP 1 Score: 234 bits (597), Expect = 4.400e-76
Identity = 113/150 (75.33%), Postives = 127/150 (84.67%), Query Frame = 0

Query:   54 AMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            A ER+YIMIKPDGVQRG+VG II+RFE +GYKL  LK KQA + LL  HY DLV+KPFFPKL  YM+SGPVV M WEGK+ VA GRKMLG TNPLAS PGTIRGDFC+EVGRNICHGSDSVENA+KEIALWF E+E++D ES  +DWIYE
Sbjct:    3 ASERTYIMIKPDGVQRGIVGNIISRFETKGYKLVALKTKQATKELLDTHYCDLVEKPFFPKLRDYMMSGPVVSMIWEGKEAVATGRKMLGATNPLASEPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEESELLDWESHSKDWIYE 152

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7S3HYI0_9SPIT (Nucleoside diphosphate kinase (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HYI0_9SPIT)

HSP 1 Score: 236 bits (601), Expect = 4.700e-76
Identity = 113/162 (69.75%), Postives = 132/162 (81.48%), Query Frame = 0

Query:   42 TTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            T A +  S P MAMER+YIMIKPDGVQR LVG IITRFE+RGY+L  LKL QADE LL++HY DLV+KPFFPKLL+YM+SGPV CM W+G++ V MGR+MLG TNP  S PGTIRGDF +EVGRNICHGSDS ENA+KEIALWF + E+V+ E    DW+YE
Sbjct:   34 TPAVARASAPLMAMERTYIMIKPDGVQRNLVGNIITRFEQRGYQLCALKLFQADEDLLREHYCDLVEKPFFPKLLSYMLSGPVTCMVWKGENAVKMGRQMLGATNPQESLPGTIRGDFSIEVGRNICHGSDSPENAEKEIALWFKDGEIVEWEDHSHDWVYE 195

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7S2YRX6_9STRA (Nucleoside diphosphate kinase n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX6_9STRA)

HSP 1 Score: 235 bits (599), Expect = 7.020e-76
Identity = 110/150 (73.33%), Postives = 127/150 (84.67%), Query Frame = 0

Query:   54 AMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            A ER+YIMIKPDGVQRGLVG I++RFE +GYKL  +K KQAD  LL++HY DLV+KPFFPKL  YM+SGPV CM WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA+KEIALWF E+E+ + ES  + WIYE
Sbjct:   38 ASERTYIMIKPDGVQRGLVGNIVSRFETKGYKLVAMKTKQADADLLEQHYIDLVEKPFFPKLKEYMLSGPVCCMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFDESELTEWESHSEGWIYE 187

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BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7S2GPN1_9EUKA (Nucleoside diphosphate kinase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GPN1_9EUKA)

HSP 1 Score: 231 bits (588), Expect = 3.190e-74
Identity = 121/179 (67.60%), Postives = 137/179 (76.54%), Query Frame = 0

Query:   25 ASSSAFARGTGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
            A++ AFA G G A   A    SA S   M MER+YIMIKPDGVQRGLVG+II RFE+RGYKL GLKL QA E LLK HY DLV+K FFP LL YM+SGPV CM WEG++ V MGR+MLGETNP AS PGTIRGDF + VGRNICHGSDS ENA+KEIALWF + E+V  E   +DW+YE
Sbjct:   12 AAAHAFAVG-GAASRHAAPRSSAAS---MEMERTYIMIKPDGVQRGLVGEIIKRFEQRGYKLGGLKLFQASEELLKTHYSDLVEKKFFPDLLEYMLSGPVTCMIWEGENAVKMGRQMLGETNPQASLPGTIRGDFSIVVGRNICHGSDSPENAEKEIALWFDDNEIVSWEDHSKDWVYE 186

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIL8_ECTSI	1.270e-137	98.52	Nucleoside diphosphate kinase n=2 Tax=Ectocarpus T...	[more]
A0A836CHD7_9STRA	5.100e-84	69.52	Nucleoside diphosphate kinase n=1 Tax=Tribonema mi...	[more]
A0A7R9VG66_9STRA	2.960e-78	71.34	Nucleoside diphosphate kinase n=1 Tax=Pseudictyota...	[more]
A0A1Z5J7R9_FISSO	4.130e-77	71.07	Nucleoside diphosphate kinase n=2 Tax=Fistulifera ...	[more]
A0A7S2EER7_TRICV	5.310e-77	69.70	Nucleoside diphosphate kinase n=1 Tax=Trieres chin...	[more]
B7FPE8_PHATC	5.380e-77	74.00	Nucleoside diphosphate kinase n=2 Tax=Phaeodactylu...	[more]
B8C642_THAPS	4.400e-76	75.33	Nucleoside diphosphate kinase n=1 Tax=Thalassiosir...	[more]
A0A7S3HYI0_9SPIT	4.700e-76	69.75	Nucleoside diphosphate kinase (Fragment) n=2 Tax=C...	[more]
A0A7S2YRX6_9STRA	7.020e-76	73.33	Nucleoside diphosphate kinase n=2 Tax=Amphiprora p...	[more]
A0A7S2GPN1_9EUKA	3.190e-74	67.60	Nucleoside diphosphate kinase n=1 Tax=Haptolina br...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 122..139 score: 59.5 coord: 58..80 score: 67.39 coord: 166..185 score: 69.35 coord: 102..121 score: 51.05 coord: 143..159 score: 72.01
IPR001564	Nucleoside diphosphate kinase	HAMAP	MF_00451	NDP_kinase	coord: 55..190 score: 32.02
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 55..192 e-value: 1.6E-82 score: 290.2
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 56..189 e-value: 3.9E-51 score: 172.6
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	3.30.70.141		coord: 53..203 e-value: 1.1E-61 score: 208.9
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	54919	Nucleoside diphosphate kinase, NDK	coord: 53..203
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 40..203
None	No IPR available	PANTHER	PTHR11349:SF44	NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC	coord: 40..203
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..203
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.862
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR023005	Nucleoside diphosphate kinase, active site	PROSITE	PS00469	NDP_KINASES	coord: 166..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1359	contig	E-siliculosus-1a_F_contig1359:14968..18795 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1359.2140.1	mRNA_E-siliculosus-1a_F_contig1359.2140.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1359 13753..18880 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1359.2140.1 ID=prot_E-siliculosus-1a_F_contig1359.2140.1|Name=mRNA_E-siliculosus-1a_F_contig1359.2140.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=204bp
MMAKTLLCGLVTLLPAALGFVVPTASSSAFARGTGVAHVSATTAPSAVSR
PTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLK
KHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLAS
APGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDW
IYE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023005	Nucleoside_diP_kinase_AS
IPR036850	NDK-like_dom_sf
IPR034907	NDK-like_dom
IPR001564	Nucleoside_diP_kinase