|
|
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: D8LIL8_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL8_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 2.720e-132 Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 2
Query: 86 MMAKTLLCGLVTLLPAALGFVVPTASSSAFARGTGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
MMAKTLLCGLVTLLPAALGFV+PTASSSAFARG+GVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV RNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE
Sbjct: 1 MMAKTLLCGLVTLLPAALGFVMPTASSSAFARGSGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVWRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A836CHD7_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD7_9STRA) HSP 1 Score: 257 bits (657), Expect = 7.750e-79 Identity = 133/194 (68.56%), Postives = 156/194 (80.41%), Query Frame = 2
Query: 113 LVTLLPAALGFVVPTASSSAFARGTGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
L+ LPA + FV P+ G V H +AT+ S ++ TMAMERSYIMIKPDGVQRGLVG+II+RFE+RGYKLA +KLKQADE LLK+HY+DL KPFFPKL+ YM+SGPVVCM WEGKDVVA GRKMLG TNPL SAPGTIRGDF L+VGRNICHGSDSV++ +E LWF AE+VD+ESA++DWIYE
Sbjct: 8 LLLALPA-MAFVAPSFM------GAQVQHRAATS--SIQTQWTMAMERSYIMIKPDGVQRGLVGEIISRFEKRGYKLAAMKLKQADEDLLKEHYRDLASKPFFPKLMGYMLSGPVVCMCWEGKDVVAQGRKMLGATNPLESAPGTIRGDFSLDVGRNICHGSDSVDSGKRESELWFSPAEIVDNESALKDWIYE 192
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7R9VG66_9STRA (Nucleoside diphosphate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VG66_9STRA) HSP 1 Score: 241 bits (615), Expect = 6.050e-73 Identity = 112/157 (71.34%), Postives = 133/157 (84.71%), Query Frame = 2
Query: 224 AVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
A S +MAMER+YIMIKPDGVQRG+VG I++RFE +GY L +K K A + LL++HYKDLV+KPFFPKL YM+SGPVVCM WEG++ V+ GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA+KEI LWF E+E++D ES +DWIYE
Sbjct: 14 ASSSLSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYHLVAMKTKMASKELLEEHYKDLVEKPFFPKLRDYMLSGPVVCMVWEGREAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIGLWFEESEILDWESHSKDWIYE 170
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7S2EER7_TRICV (Nucleoside diphosphate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EER7_TRICV) HSP 1 Score: 241 bits (615), Expect = 5.410e-72 Identity = 124/200 (62.00%), Postives = 146/200 (73.00%), Query Frame = 2
Query: 95 KTLLCGLVTLLPAALGFVVPTASSSAFARGTGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
KT+ LL A PT S+ R + V+A A S+ + +MAMER+YIMIKPDGVQRG+VG I++RFE +GY L LK K A LL +HYKDLVDKPFFPKL YM+SGPVVCM WEGK+ V GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA++EI LWF E+EV++ E +DWIYE
Sbjct: 39 KTVAFLYAALLAGAADAFAPT--STFVGRPAFTSAVAAPVAKSSATELSMAMERTYIMIKPDGVQRGIVGNILSRFESKGYHLVALKTKMATAELLDQHYKDLVDKPFFPKLRDYMLSGPVVCMVWEGKEAVTTGRKMLGATNPLESAPGTIRGDFCVEVGRNICHGSDSVENAEREIGLWFEESEVLEWEDHSKDWIYE 236
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A1Z5J7R9_FISSO (Nucleoside diphosphate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7R9_FISSO) HSP 1 Score: 239 bits (609), Expect = 7.940e-72 Identity = 113/159 (71.07%), Postives = 132/159 (83.02%), Query Frame = 2
Query: 218 PSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
P +V+ +MAMER+YIMIKPDGVQRG+VG II+RFE +GYKL +K + A + LL+KHY DL KPFFPKL YM+SGPVV M WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA+KEIALWF E+EV+D ES Q W+YE
Sbjct: 28 PRSVNSLSMAMERTYIMIKPDGVQRGIVGNIISRFETKGYKLVAMKTRMATKELLEKHYADLTSKPFFPKLRDYMLSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENANKEIALWFDESEVLDWESHSQSWLYE 186
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: B7FPE8_PHATC (Nucleoside diphosphate kinase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPE8_PHATC) HSP 1 Score: 237 bits (605), Expect = 9.900e-72 Identity = 111/150 (74.00%), Postives = 126/150 (84.00%), Query Frame = 2
Query: 245 AMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
A ER+YIMIKPDG+QRG+VG I+ RFE +GYKL +K KQA LL+ HYKDLVDKPFFPKL YM+SGPVV M WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA+KEIALWF E E++D ES +DWIYE
Sbjct: 3 ASERTYIMIKPDGIQRGIVGNIVNRFETKGYKLVAMKTKQATSELLETHYKDLVDKPFFPKLKEYMMSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEEDEILDWESHSKDWIYE 152
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: B8C642_THAPS (Nucleoside diphosphate kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C642_THAPS) HSP 1 Score: 235 bits (599), Expect = 7.600e-71 Identity = 113/150 (75.33%), Postives = 127/150 (84.67%), Query Frame = 2
Query: 245 AMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
A ER+YIMIKPDGVQRG+VG II+RFE +GYKL LK KQA + LL HY DLV+KPFFPKL YM+SGPVV M WEGK+ VA GRKMLG TNPLAS PGTIRGDFC+EVGRNICHGSDSVENA+KEIALWF E+E++D ES +DWIYE
Sbjct: 3 ASERTYIMIKPDGVQRGIVGNIISRFETKGYKLVALKTKQATKELLDTHYCDLVEKPFFPKLRDYMMSGPVVSMIWEGKEAVATGRKMLGATNPLASEPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEESELLDWESHSKDWIYE 152
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7S3HYI0_9SPIT (Nucleoside diphosphate kinase (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HYI0_9SPIT) HSP 1 Score: 236 bits (603), Expect = 8.490e-71 Identity = 113/162 (69.75%), Postives = 132/162 (81.48%), Query Frame = 2
Query: 209 TTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
T A + S P MAMER+YIMIKPDGVQR LVG IITRFE+RGY+L LKL QADE LL++HY DLV+KPFFPKLL+YM+SGPV CM W+G++ V MGR+MLG TNP S PGTIRGDF +EVGRNICHGSDS ENA+KEIALWF + E+V+ E DW+YE
Sbjct: 34 TPAVARASAPLMAMERTYIMIKPDGVQRNLVGNIITRFEQRGYQLCALKLFQADEDLLREHYCDLVEKPFFPKLLSYMLSGPVTCMVWKGENAVKMGRQMLGATNPQESLPGTIRGDFSIEVGRNICHGSDSPENAEKEIALWFKDGEIVEWEDHSHDWVYE 195
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7S2YRX6_9STRA (Nucleoside diphosphate kinase n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX6_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.240e-70 Identity = 110/150 (73.33%), Postives = 127/150 (84.67%), Query Frame = 2
Query: 245 AMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
A ER+YIMIKPDGVQRGLVG I++RFE +GYKL +K KQAD LL++HY DLV+KPFFPKL YM+SGPV CM WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EVGRNICHGSDSVENA+KEIALWF E+E+ + ES + WIYE
Sbjct: 38 ASERTYIMIKPDGVQRGLVGNIVSRFETKGYKLVAMKTKQADADLLEQHYIDLVEKPFFPKLKEYMLSGPVCCMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFDESELTEWESHSEGWIYE 187
BLAST of mRNA_E-siliculosus-1a_F_contig1359.2140.1 vs. uniprot
Match: A0A7S2GPN1_9EUKA (Nucleoside diphosphate kinase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GPN1_9EUKA) HSP 1 Score: 231 bits (590), Expect = 5.000e-69 Identity = 121/179 (67.60%), Postives = 137/179 (76.54%), Query Frame = 2
Query: 158 ASSSAFARGTGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 694
A++ AFA G G A A SA S M MER+YIMIKPDGVQRGLVG+II RFE+RGYKL GLKL QA E LLK HY DLV+K FFP LL YM+SGPV CM WEG++ V MGR+MLGETNP AS PGTIRGDF + VGRNICHGSDS ENA+KEIALWF + E+V E +DW+YE
Sbjct: 12 AAAHAFAVG-GAASRHAAPRSSAAS---MEMERTYIMIKPDGVQRGLVGEIIKRFEQRGYKLGGLKLFQASEELLKTHYSDLVEKKFFPDLLEYMLSGPVTCMIWEGENAVKMGRQMLGETNPQASLPGTIRGDFSIVVGRNICHGSDSPENAEKEIALWFDDNEIVSWEDHSKDWVYE 186
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 612 |
| Model size | 1912 |
| Exons | 4 |
| Ec32 ortholog | Ec-11_004330.1 |
| Ec32 ortholog description | flagellar associated protein, nucleoside diphosphate kinase-like protein |
| Hectar predicted targeting category | chloroplast |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko04131 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | F |
| EC | 2.7.4.6 |
| EggNOG OGs | COG0105@1,KOG0888@2759 |
| EggNOG free text desc. | Nucleoside diphosphate kinase |
| GOs | GO:0000166,GO:0000278,GO:0000287,GO:0000976,GO:0000977,GO:0001012,GO:0001067,GO:0001101,GO:0001667,GO:0001678,GO:0001726,GO:0001775,GO:0001882,GO:0001883,GO:0002009,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002683,GO:0002761,GO:0002762,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004518,GO:0004536,GO:0004550,GO:0004672,GO:0004674,GO:0005488,GO:0005504,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005758,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005874,GO:0005880,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006183,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006241,GO:0006259,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006928,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007229,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007424,GO:0007427,GO:0007589,GO:0007595,GO:0008017,GO:0008092,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008285,GO:0008289,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009148,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014070,GO:0014074,GO:0014075,GO:0015630,GO:0015631,GO:0015949,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016333,GO:0016334,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0016787,GO:0016788,GO:0017076,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019001,GO:0019205,GO:0019215,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019725,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0019933,GO:0019935,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0022008,GO:0022607,GO:0022610,GO:0023052,GO:0030027,GO:0030141,GO:0030154,GO:0030554,GO:0030856,GO:0030858,GO:0030879,GO:0030900,GO:0031090,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031406,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032587,GO:0032940,GO:0033293,GO:0033500,GO:0033554,GO:0033574,GO:0033993,GO:0034284,GO:0034330,GO:0034332,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034774,GO:0035152,GO:0035556,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0036230,GO:0040011,GO:0042119,GO:0042127,GO:0042221,GO:0042278,GO:0042451,GO:0042455,GO:0042493,GO:0042592,GO:0042593,GO:0042802,GO:0042981,GO:0042995,GO:0043015,GO:0043021,GO:0043024,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043388,GO:0043412,GO:0043434,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045055,GO:0045216,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045637,GO:0045638,GO:0045664,GO:0045666,GO:0045682,GO:0045684,GO:0045893,GO:0045935,GO:0045944,GO:0046036,GO:0046039,GO:0046051,GO:0046128,GO:0046129,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046683,GO:0046777,GO:0046872,GO:0046903,GO:0046939,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050678,GO:0050679,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051254,GO:0051259,GO:0051591,GO:0051674,GO:0051716,GO:0051960,GO:0051962,GO:0055082,GO:0055086,GO:0060205,GO:0060255,GO:0060284,GO:0060322,GO:0060416,GO:0060429,GO:0060541,GO:0060548,GO:0061508,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071396,GO:0071398,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0090130,GO:0090132,GO:0090304,GO:0090305,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098590,GO:0098805,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0140097,GO:0140110,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901654,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1901701,GO:1902105,GO:1902106,GO:1902680,GO:1903506,GO:1903508,GO:1903706,GO:1903707,GO:1904813,GO:1990837,GO:2000026,GO:2000112,GO:2001141 |
| KEGG Module | M00049,M00050,M00052,M00053 |
| KEGG Pathway | ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 |
| KEGG Reaction | R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 |
| KEGG ko | ko:K00940 |
| KEGG rclass | RC00002 |
| Preferred name | NME3 |
| Seed eggNOG ortholog | 2880.D8LIL8 |
| Seed ortholog evalue | 7e-107 |
| Seed ortholog score | 393.3 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927874.2469025-UTR-E-siliculosus-1a_F_contig1359:13752..14967 | 1622927874.2469025-UTR-E-siliculosus-1a_F_contig1359:13752..14967 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1359 13753..14967 - |
| 1696318717.7634983-UTR-E-siliculosus-1a_F_contig1359:13752..14967 | 1696318717.7634983-UTR-E-siliculosus-1a_F_contig1359:13752..14967 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1359 13753..14967 - |
| 1622927874.312397-UTR-E-siliculosus-1a_F_contig1359:18795..18880 | 1622927874.312397-UTR-E-siliculosus-1a_F_contig1359:18795..18880 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1359 18796..18880 - |
| 1696318717.8205645-UTR-E-siliculosus-1a_F_contig1359:18795..18880 | 1696318717.8205645-UTR-E-siliculosus-1a_F_contig1359:18795..18880 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1359 18796..18880 - |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1359.2140.1 >prot_E-siliculosus-1a_F_contig1359.2140.1 ID=prot_E-siliculosus-1a_F_contig1359.2140.1|Name=mRNA_E-siliculosus-1a_F_contig1359.2140.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=204bp
MMAKTLLCGLVTLLPAALGFVVPTASSSAFARGTGVAHVSATTAPSAVSR
PTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLK
KHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLAS
APGTIRGDFCLEVGRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDW
IYE* back to topmRNA from alignment at E-siliculosus-1a_F_contig1359:13753..18880- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1359.2140.1 ID=mRNA_E-siliculosus-1a_F_contig1359.2140.1|Name=mRNA_E-siliculosus-1a_F_contig1359.2140.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5128bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1359:13753..18880- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTCGGACGGTGGTCGGTCTGGGGAAGCAAAGCAGCAGTGCTCTTCAACAT
CTATCCCGTCTAATCCTCGTTCACACGAAGCTAAGATGATGGCGAAGACT
CTCCTGTGCGGTCTCGTGACCCTCCTCCCGGCTGCGCTCGGTTTCGTCGT
GCCGACCGCCTCCAGCAGCGCCTTTGCAAGAGGAACCGGGGTCGCTCATG
TTTCGGCGACTACCGCACCATCGGCGGTCAGCAGGCCCACCATGGCAATG
GAGCGCTCGTACATCATGATCAAGCCGGACGGCGTACAGCGAGGGTGAGA
GCCGTAGGGAAGTCATGTAGAGGAGATGCTGCTGAAGAATCGGTTGTGTT
CGAGTCTGTCGCAAATCTCTACACGTTGCAGTGGATTGGTCATTGGTCTC
CTGCTTGTACAACGTCAACCGGTCGTTTGCTGCACAGCAACCAGCACAGC
GTTTGCGTCCACACTTGCATAACAGCTCTCTAGCGGTGTGTGTCATGGTG
CCGTGCTCCCTCTCTCCCCCTCTCTCCGCAACTGCTGTCAATTATGTCTG
CTTCCAACGTCATGTAGTTCAAAACAGGCATCACCGATATCTACGATTTT
TGGGATACTGCTGTATCGCCGCTGTCGTGTGGCCGACTCTGACGCAACCG
CGTTCAATCGTTGCCGCATGTGCGCACGGACCGCACTGCTCTATTGCTGC
CGTGGTGTGCGCATCACGCCGGTGGTACAATCTCTTGGGTGTTAGGTATC
TTACCACATACGCTGTCTTCCTTGCACAGCAGTTAATGTACTCAGCGGGA
AAAGCGCATCTTGCACCCCATCCAAGTCAGTCCGAGGTTCTTGATCAGAG
AGACATGTTGGACCAATTACTCTTTGCTGCGAACGAGAGATTCGGATGAT
TTTTCGTCCTACTTGTGCATAGGCATGTACCAAGCTCTTGGCACGTGCGC
GCTATTTCGCATTGTCACCGCCGTACGAAAGCCTTGGGGCACGCTCAAAC
CGCCTAGTAGGACGACGAATCGTTGCGCTAGCGCTCGCTCTGTTGTCAGC
AGTTGGTGGCGCAAAGCCTGGCGTCGATGACGTATCTAAATACCAGCGGA
CAGCAAAGAGGACATCCTTCTGCTCTGCTGCCAGTAGGGTAGATCTTTCA
TGTGTCTGTTGTGTATTCTGATAAGCTGTTGAATTATCTCAGCCCGTATT
TCACGTTGTCTCCCACGGGCGGGATGACGACCAAGCCCAGCAGCAAATGC
GCGGTCAAAGCCTCCGCTCGCTAGAATTTCGTTCTTGTACAACACAAAAT
CTTGTGCTCAACTCGTGCGTTGTCGCGAAAAAACAATTTTTACCGTCCTC
CACGACCTATCTTGATACCCTTGTGGTGCTCTCCCTTCTTTGCTGCTGTG
GCCACAGCCTTGTCGGAAAGATCATCACTCGGTTCGAAGAGCGCGGGTAC
AAGCTCGCGGGTCTCAAGCTCAAGCAGGCCGACGAAGCCCTGCTCAAGAA
GCACTACAAGTGAGTGTCGCCTGGAGATAAACGCAGAGAGAGCTGAAGCA
CAATTCTACAGGACTTGGGTGAATACTGCTGTGTTTAACCTGGGGATGTT
GTCGAAACGTGACACGTGTTCCCACGATGTTTTCAAGGGGCACGACATTA
ATGTTGTCATTAGCTCTGACTCCCCCGGAGAAAGGAGAATCCGCTTGTAG
TGTTGGAGGTCCAGGATTTTAGCCAAGTGTACAGCGTAACAAGGCCATCA
TCGCGTTTTCACGTACTGCAATCTCACCGCTGGCCTGACTGTATAAATGC
GGTCGCATTTCGTACTGAAAGCTTCACCCGTGGCCTGATCTGACGAGTGT
GGAATCCGAGACCTCTTTCCTTGGAAGTCATTTGGCTGCCGGTCGATTTT
TTAGCGAGCATTGGAAGAAACCCAATCACTCCATCGCTGCCCTACTTATA
TGAGACAGCAGGCGCGGCCACGACGCGTGCAGCAAAAGGCGGGGGCTGCA
TTGGCCCAAAATAGTGCATGCTTGGGTATGTACACAGATCGGAAGGTCAA
AAGGAGCACCCGAGTCTGGGAGGCGCCTCTATCGTCACTTAGGAGAGAGG
AGGAAACAGCAGCGTCCCTTCGTCAAGAACGACATGACAGGGAAAACATC
GAGTGCCCCCCAAACCCTCCAACCAAACCCATGCCCATGGCACATCTGGT
TTGGCACAGCACACTCAAGGACGATGACCAGCTTCTGGTTCATTCATGTG
AAACGTGTCTTGGCGGACGAAAAACTCGGCATACAGCAGCATCGCCCCGT
CCCGGCATTGTAGGGGTGCGAGGCCAACGGTCTAACGACTACAGCATGCG
TTTACATGCGTACCCCCCCCCCCCCTAACGTAGGCGCTTCACGCTTGGTG
ATGTGAGAGCCTGGTCCGGTGAGAACCCTGCATGCTCCGTCCCGGCTTTG
TAGGGATGCGAGGTCAATGGTCTAACGACTACGGCATGCACGACTATGAG
TACCCCCCCCCCCCCCCCCCCCTAACGTAGGGACCTCGTCGACAAGCCCT
TCTTCCCCAAGCTGCTGGCATACATGATCTCGGGGCCGGTGGTCTGCATG
GCCTGGGAAGGCAAGGACGTGGTGGCGATGGGGCGCAAGATGCTGGGAGA
GACCAACCCGCTGGCGAGCGCACCGGGGACCATCCGCGGAGACTTCTGCT
TGGAGGTGATGACGGGAAGGGACCAGCGGCGCCAGTAGCAGCAGCAGCAG
TAGCAGTAGCAGCAGCAGAAGCAGCAGCCTCGCGAGACGGTTTTAGGCGG
CTTGCTGCAGTTTCGAGCAAAACTGTGTATTGTATCGTTGTCTGATAGAA
GACTCGAGGGGCAACCTTACAAAGGGATATGCCGATTTACTAAAAATATC
TGCGGTGCCTTCGGTGGGAGACTCAGCGGTCGTAACGTCGTACATGTCAG
CACATCGACTACAACGACCGGTGTAAACCCGTAGTGGTGATGGTGGTGGT
GACGAATGGAAGGGGGTAAATATCCGTGGTTTATATAGAGGATTCCATAG
CAACGGCTTACATTTGGGGAAGGGAGTCAAGGCAGTTTCTGTGGATGTGG
ATGTTTTTTTTCTCATCTATTCTAAACGTCAGTTTGCACCATTCGGTGGG
TGTTTGTTTGGTCCACCAGCCGGGGTCAGACAGGAGGAAGGTAAGCACAC
TTTTTGCGTTTTACCCTTGTGCTGTTATACGTTGCTTTAGCCCTTGAGGG
TAGGGAACAAGAGAGTTGACATGATTTCTCACGCAGGCTTACGAAAACAC
CTCTCTACCTCTCTCTTAACGCGCCTGCCGCTGCCGCTCGCAGCCGCTCA
AAATTATGTCCGTAAGTAGTGTATCGTGTGTATGTGCACCTGTTCTTTTA
TTTCTTGCTCTCCCGTTCGCGAGTTTTTCGCGCTGTCATTGTTCTTGAAA
AGCGCCCTCCCCCGAGGTATTGTTGGTATACTTCTCTCTCACTCAAAGGT
TCTCTTTACCAGGGAAACACTGACGGGATTCGTTTTCTTTAATCTCACTT
GCACTTGGGTAGAGCCGTCGTTTTTGATGCACTCTTCCTGCCCCCCTCCC
CATCGACTGATTCTTGGGGTACTGTAGAAACGATCACCCGCGTTTTCTCC
GTGGCCATGTGACGAAACACACTATCAGTGCCTCGCCTTGAGACGGATGC
TTGGCCAAGTATCAAATGGCAACGGCTGGCAACAAATGAACGCGCCCCCC
CTTGCCCCCTCGCCCCACCCCCTCCCTACCTTGCCAGGTGGGGCGAAACA
TCTGCCACGGGTCTGACTCGGTAGAGAACGCGGACAAGGAGATTGCCCTG
TGGTTCGGAGAAGCGGAGGTAGTGGACCACGAGTCCGCCATGCAGGACTG
GATCTACGAGTAGGATTGGTTGAGGATCTCGGGTCTGTTGACGAATAGAC
AGATAGATGATGAGTCGCGGGCGAATGAAGGAGTTTTTGTTTCGTAGCAA
ACAGTGCTGGCGTCGTTGAGTACGAAGGTCGTTGGTGTCCGATTTTTTCA
CCGTGTCCTATCAAAGTGGCATGTTCGTCGCCTTCGACTTGATTTTGGAA
CGAAACGACGGGAGTTGAGCCCGAACGAGGAGGCGTGACAAGGGCGGAGC
CGAAATCGGACCTTGCACGTGGTTCGACCCCAGGACCCAGTTTTGATTAA
AACTGGGTCATCTCAGACATGTGTCGGTTCAAGGGTCCATTAATCGATTT
CTCTCTAGATCCACCGTTAGAACCATTTTTGTTTGTGGGGTGAATAGGGT
CGGGGTTAGGGTTATTAACCCCATAATCTCCGCAATCATGCCACGGACTT
TAGGTCCAAACTACAAAGTGGTTGGGATTTGTTTCCGGGCTGCACACTCG
CCGCGCAGATGGATGCTGACCTTATGTTTACAACCATCTCCTTTGACCCC
GCGGCGTACGTGCGACTCAAGTCTGTTGTTTAGTCCTCAGTCCCGATCCA
TTTGCTTTTTTTTTTTTTGTGTTGTCCTCTCGAACACGCCCAAGGATAGC
AGAGAACGCATGCCGTGCGGGGGGAGGCAAGGTGGGGTGCACACGCACGT
GTTGTTTGCTCCCATTTTGCACCGGGGGAGTCGCGTTTGTTTCGTTTGTC
GGGTGTTACGGTGTTCCATGCAGATGAGACGAAACTCTCACCAGCACACC
AGACGGGCATCGTTAGTAGATGCTCCTCCCCCCGCACGCGGGCGTGTGCT
CCAACTGCTTGCGGGTTGGTAGATACTCGAAAATTGGATCTCTCGGCCCA
CATATAGTAAGCGGAGCCAACCCGTATCTAAGACCCCATGTACTATTTTG
GGTTTGTTTTTTGGCTAGCAGGCGGCACATTGGCGTAGGCCGTCATTGTT
GATGTGGTTAACTTTGTTTCTTCCAATACGCCTCTCGTGCTTCGATTTTG
GGATGCGGATGGTATGGGTCAAGCGCACGAACAACTCAGCAACACGCGCT
TTGCGGCGGCGGCTGCGGCGGCGTGGCTGTCTGTCTTTACAGCCCTGCTG
GGGGGTCGTTGCCGGGAATTGTCTCCGGCAAATGCATGCTTTGACGATTG
AGCCGTAATAACCCGTCACACCGTAAGC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1359:13753..18880- >mRNA_E-siliculosus-1a_F_contig1359.2140.1 ID=mRNA_E-siliculosus-1a_F_contig1359.2140.1|Name=mRNA_E-siliculosus-1a_F_contig1359.2140.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1224bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1359:13753..18880- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGGCGAAGACTCTCCTGTGCGGTCTCGTGACCCTCCTCCCGGCTGC
GCTCGGTTTCGTCGTGCCGACCGCCTCCAGCAGCGCCTTTGCAAGAGGAA
CCGGGGTCGCTCATGTTTCGGCGACTACCGCACCATCGGCGGTCAGCAGG
CCCACCATGGCAATGGAGCGCTCGTACATCATGATCAAGCCGGACGGCGT
ACAGCGAGGATGATGGCGAAGACTCTCCTGTGCGGTCTCGTGACCCTCCT
CCCGGCTGCGCTCGGTTTCGTCGTGCCGACCGCCTCCAGCAGCGCCTTTG
CAAGAGGAACCGGGGTCGCTCATGTTTCGGCGACTACCGCACCATCGGCG
GTCAGCAGGCCCACCATGGCAATGGAGCGCTCGTACATCATGATCAAGCC
GGACGGCGTACAGCGAGGCCTTGTCGGAAAGATCATCACTCGGTTCGAAG
AGCGCGGGTACAAGCTCGCGGGTCTCAAGCTCAAGCAGGCCGACGAAGCC
CTGCTCAAGAAGCACTACAACCTTGTCGGAAAGATCATCACTCGGTTCGA
AGAGCGCGGGTACAAGCTCGCGGGTCTCAAGCTCAAGCAGGCCGACGAAG
CCCTGCTCAAGAAGCACTACAAGGACCTCGTCGACAAGCCCTTCTTCCCC
AAGCTGCTGGCATACATGATCTCGGGGCCGGTGGTCTGCATGGCCTGGGA
AGGCAAGGACGTGGTGGCGATGGGGCGCAAGATGCTGGGAGAGACCAACC
CGCTGGCGAGCGCACCGGGGACCATCCGCGGAGACTTCTGCTTGGAGGGA
CCTCGTCGACAAGCCCTTCTTCCCCAAGCTGCTGGCATACATGATCTCGG
GGCCGGTGGTCTGCATGGCCTGGGAAGGCAAGGACGTGGTGGCGATGGGG
CGCAAGATGCTGGGAGAGACCAACCCGCTGGCGAGCGCACCGGGGACCAT
CCGCGGAGACTTCTGCTTGGAGGTGGGGCGAAACATCTGCCACGGGTCTG
ACTCGGTAGAGAACGCGGACAAGGAGATTGCCCTGTGGTTCGGAGAAGCG
GAGGTAGTGGACCACGAGTCCGCCATGCAGGACTGGATCTACGAGTAGGT
GGGGCGAAACATCTGCCACGGGTCTGACTCGGTAGAGAACGCGGACAAGG
AGATTGCCCTGTGGTTCGGAGAAGCGGAGGTAGTGGACCACGAGTCCGCC
ATGCAGGACTGGATCTACGAGTAG back to top
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