prot_E-siliculosus-1a_F_contig13558.2122.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13558.2122.1
Unique Nameprot_E-siliculosus-1a_F_contig13558.2122.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length46
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig13558.2122.1 vs. uniprot
Match: A0A6H5JPH9_9PHAE (IU_nuc_hydro domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH9_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.380e-22
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 
Query:    1 LETKTRPFFAWDLLTVAQLVHPELFTTSQVECDVVVGGASQGRTVR 46
            LETKTRPFFAWDLLTVAQLVHPELFTTSQVECDVV+GGASQGRTVR
Sbjct:  272 LETKTRPFFAWDLLTVAQLVHPELFTTSQVECDVVIGGASQGRTVR 317
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BLAST of mRNA_E-siliculosus-1a_F_contig13558.2122.1 vs. uniprot
Match: D8LM07_ECTSI (Inosine-adenosine-guanosine-nucleoside hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM07_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 5.940e-22
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 
Query:    1 LETKTRPFFAWDLLTVAQLVHPELFTTSQVECDVVVGGASQGRTVR 46
            LET+TRPFFAWDLLTVAQLVHPELFTTSQVECDVVVGGASQGRTVR
Sbjct:  260 LETETRPFFAWDLLTVAQLVHPELFTTSQVECDVVVGGASQGRTVR 305
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BLAST of mRNA_E-siliculosus-1a_F_contig13558.2122.1 vs. uniprot
Match: UPI001B374E6B (Nucleoside hydrolase n=2 Tax=Micromonospora sp. C51 TaxID=2824879 RepID=UPI001B374E6B)

HSP 1 Score: 57.0 bits (136), Expect = 2.820e-8
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0 
Query:    1 LETKTRPFFAWDLLTVAQLVHPELFTTSQVECDVVVGGASQGRTVR 46
            +ET   P+  WD L  + L  PELFT  Q+ CDVVV GAS+GRTVR
Sbjct:  242 VETVGSPYCCWDSLATSYLAAPELFTFDQIRCDVVVDGASEGRTVR 287
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13558.2122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JPH9_9PHAE2.380e-2297.83IU_nuc_hydro domain-containing protein n=1 Tax=Ect... [more]
D8LM07_ECTSI5.940e-2297.83Inosine-adenosine-guanosine-nucleoside hydrolase n... [more]
UPI001B374E6B2.820e-856.52Nucleoside hydrolase n=2 Tax=Micromonospora sp. C5... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036452Ribonucleoside hydrolase-likeGENE3D3.90.245.10coord: 1..46
e-value: 2.1E-8
score: 35.9
IPR036452Ribonucleoside hydrolase-likeSUPERFAMILY53590Nucleoside hydrolasecoord: 7..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13558contigE-siliculosus-1a_F_contig13558:125..262 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13558.2122.1mRNA_E-siliculosus-1a_F_contig13558.2122.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13558 125..262 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13558.2122.1 ID=prot_E-siliculosus-1a_F_contig13558.2122.1|Name=mRNA_E-siliculosus-1a_F_contig13558.2122.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=46bp
LETKTRPFFAWDLLTVAQLVHPELFTTSQVECDVVVGGASQGRTVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036452Ribo_hydro-like