prot_E-siliculosus-1a_F_contig13553.2121.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13553.2121.1
Unique Nameprot_E-siliculosus-1a_F_contig13553.2121.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length200
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: A0A849F3P3_9FLAO (Response regulator n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A849F3P3_9FLAO)

HSP 1 Score: 360 bits (923), Expect = 2.730e-124
Identity = 180/199 (90.45%), Postives = 186/199 (93.47%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQDDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIRE YDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIAL+NFTYG +G A  E     +DVP+SNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPK KFYRAHKSY VNVDHIDAINS+D+MINNNLIPISKDFKEFIISAMNS
Sbjct:   54 LIDIILASDKTGIDLGKHIREKYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALSNFTYGTSGKASPEGSTGDEDVPLSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKKKFYRAHKSYIVNVDHIDAINSRDVMINNNLIPISKDFKEFIISAMNS 252
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: A4AUR3_MARSH (Response regulator receiver signal transduction histidine kinase n=64 Tax=root TaxID=1 RepID=A4AUR3_MARSH)

HSP 1 Score: 358 bits (919), Expect = 1.110e-123
Identity = 180/199 (90.45%), Postives = 186/199 (93.47%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQDDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIAL+NFTYG N ++       ++DVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYL+KLP  KFYRAHKSY VNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS
Sbjct:   54 LIDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALSNFTYGTNKSSSEADGVREEDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLQKLPNNKFYRAHKSYIVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 252
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BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: G0L7N1_ZOBGA (Two-component system-Response regulator n=13 Tax=Flavobacteriaceae TaxID=49546 RepID=G0L7N1_ZOBGA)

HSP 1 Score: 340 bits (871), Expect = 2.110e-116
Identity = 175/199 (87.94%), Postives = 181/199 (90.95%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQDDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIAL+NFT      A    + S +DVPMSN+VLKDSIFVKKQHLYYRIQF DI+FIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPK KFYRAHKSY VNVDHIDAINSKDIMI + LIPISKDFKEFIISAMNS
Sbjct:   54 LIDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALSNFTRSDKSPAA--VVNSNEDVPMSNTVLKDSIFVKKQHLYYRIQFSDIRFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKNKFYRAHKSYIVNVDHIDAINSKDIMIKDTLIPISKDFKEFIISAMNS 250
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: UPI000B4A9117 (response regulator n=1 Tax=Robiginitalea sediminis TaxID=1982593 RepID=UPI000B4A9117)

HSP 1 Score: 340 bits (871), Expect = 2.260e-116
Identity = 173/199 (86.93%), Postives = 180/199 (90.45%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQDDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIR+NYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIAL+NF  G   ++ GEQ     D   +NSVLKDSIFVKKQHLYYRIQF DIQFIKADNVYLEVNT DKKFLVRSPLKDYLEKLP+ KFYRAHKSY VNVDHIDAINSKDIMINNNLIPISKDFKEFIIS+MNS
Sbjct:   54 LIDIILASDKTGIDLGKHIRDNYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALSNFIKGQKASSAGEQDDDAADGINTNSVLKDSIFVKKQHLYYRIQFDDIQFIKADNVYLEVNTKDKKFLVRSPLKDYLEKLPRNKFYRAHKSYIVNVDHIDAINSKDIMINNNLIPISKDFKEFIISSMNS 252
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: A0A0P7B3R7_9FLAO (LytTR family two component transcriptional regulator n=9 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A0P7B3R7_9FLAO)

HSP 1 Score: 339 bits (870), Expect = 3.210e-116
Identity = 172/199 (86.43%), Postives = 180/199 (90.45%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQDDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIRE+Y+IPFIFVTSNSD+ATVENAKTVKP+GYLVKPFEQQDLYTSIEIAL+NF Y     +K     +  D  MSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPK KFYRAHKSY VNVDHIDAINSKDIMINN LIPISKDFKEFIIS+MNS
Sbjct:   54 LIDIILASDKTGIDLGKHIREHYNIPFIFVTSNSDKATVENAKTVKPDGYLVKPFEQQDLYTSIEIALSNFNYSKKSESKDMGASADGDAFMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKNKFYRAHKSYIVNVDHIDAINSKDIMINNTLIPISKDFKEFIISSMNS 252
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: A4CLP0_ROBBH (Response Regulator Receiver Signal Transduction Histidine Kinase n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) TaxID=313596 RepID=A4CLP0_ROBBH)

HSP 1 Score: 335 bits (860), Expect = 1.070e-114
Identity = 170/199 (85.43%), Postives = 178/199 (89.45%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQDDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTV+PNGYLVKPFEQQDLYTSIEIAL+NF YG+    +G+   +  D   SNSVLKDSIFVKKQHLYYRIQF DI FIKADNVYLEVNT DKKFLVRSPLKDYLEKLP+ KFYRAHKSY VNVDHIDAINS+DIMINN  IPISKDFKEFIISAMNS
Sbjct:   54 LIDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVQPNGYLVKPFEQQDLYTSIEIALSNFVYGSKNRPEGDAAEAAADEVTSNSVLKDSIFVKKQHLYYRIQFEDILFIKADNVYLEVNTRDKKFLVRSPLKDYLEKLPRNKFYRAHKSYIVNVDHIDAINSRDIMINNKAIPISKDFKEFIISAMNS 252
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: A0A0S1S9M8_9FLAO (LytTR family transcriptional regulator n=4 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A0S1S9M8_9FLAO)

HSP 1 Score: 335 bits (859), Expect = 1.420e-114
Identity = 173/201 (86.07%), Postives = 184/201 (91.54%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQD--DVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIR+NY+IPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIAL++F Y    + KG+   ++D  +  MSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLP+ KFYRAHKSY VNVDHIDAINSKDIMINN LIPISK+FKEFIISAMNS
Sbjct:   54 LIDIILASDKTGIDLGKHIRDNYNIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALSSFNY----SEKGDNTNNEDGEEKLMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPQNKFYRAHKSYIVNVDHIDAINSKDIMINNTLIPISKEFKEFIISAMNS 250
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: E6X6V7_CELAD (Two component transcriptional regulator, LytTR family n=17 Tax=Flavobacteriaceae TaxID=49546 RepID=E6X6V7_CELAD)

HSP 1 Score: 335 bits (858), Expect = 2.310e-114
Identity = 171/201 (85.07%), Postives = 180/201 (89.55%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQ--DDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIRE Y+IPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIAL++F Y   G+        +  DD  +SNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLP  KFYRAHKSY VNVDHI+AINSKDI+INNNLIPISK+FKEFIISAMNS
Sbjct:   54 LIDIILASDKTGIDLGKHIREKYNIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALSSFNYNEKGSENNNAPVEEVADDKLVSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPSNKFYRAHKSYIVNVDHIEAINSKDILINNNLIPISKEFKEFIISAMNS 254
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: A0A371JVA8_9FLAO (DNA-binding response regulator n=8 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A371JVA8_9FLAO)

HSP 1 Score: 333 bits (853), Expect = 1.200e-113
Identity = 172/200 (86.00%), Postives = 180/200 (90.00%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQD-DVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIR+ Y+IPFIFVTSNSDRATVENAKTVKP+GYLVKPFEQQDLYTSIEIAL+NF Y      KG+++   D D   SNSVLKDSIFVKKQHLYYRIQF DIQFIKADNVYLEVNT DKKFLVRSPLKDYLEKLPK KFYRAHKSY VNVDHIDAINSKDIMINNNLIPISKDFKEFIIS+MNS
Sbjct:   54 LIDIILASDKTGIDLGKHIRDAYNIPFIFVTSNSDRATVENAKTVKPDGYLVKPFEQQDLYTSIEIALSNFNYSKK--QKGQEVLGNDEDTITSNSVLKDSIFVKKQHLYYRIQFSDIQFIKADNVYLEVNTADKKFLVRSPLKDYLEKLPKNKFYRAHKSYIVNVDHIDAINSKDIMINNNLIPISKDFKEFIISSMNS 251
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Match: G2PK13_MURRD (Two component transcriptional regulator, LytTR family n=39 Tax=Flavobacteriaceae TaxID=49546 RepID=G2PK13_MURRD)

HSP 1 Score: 331 bits (849), Expect = 4.550e-113
Identity = 170/199 (85.43%), Postives = 178/199 (89.45%), Query Frame = 0 
Query:    1 LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGYLVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQDDVPMSNSVLKDSIFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLPKTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS 199
            L DIILASDKTGIDLGKHIR+ Y+IPFIFVTSNSDRATVENAKTVKP+GYLVKPFEQQDLYTSIEIAL+NF Y   G  K   +  + D   SNSVLKDSIFVKKQHLYYRIQF DIQFIKADNVYLEVNT DKKFLVRSPLKDYLEKLPK KFYRAHKSY VNVDHIDAINSKDIMINNNLIPISKDFKEFI+S+MNS
Sbjct:   54 LIDIILASDKTGIDLGKHIRDTYNIPFIFVTSNSDRATVENAKTVKPDGYLVKPFEQQDLYTSIEIALSNFNYAKKGIDK---VADEADEITSNSVLKDSIFVKKQHLYYRIQFCDIQFIKADNVYLEVNTADKKFLVRSPLKDYLEKLPKNKFYRAHKSYIVNVDHIDAINSKDIMINNNLIPISKDFKEFILSSMNS 249
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13553.2121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A849F3P3_9FLAO2.730e-12490.45Response regulator n=1 Tax=Maribacter sp. TaxID=18... [more]
A4AUR3_MARSH1.110e-12390.45Response regulator receiver signal transduction hi... [more]
G0L7N1_ZOBGA2.110e-11687.94Two-component system-Response regulator n=13 Tax=F... [more]
UPI000B4A91172.260e-11686.93response regulator n=1 Tax=Robiginitalea sediminis... [more]
A0A0P7B3R7_9FLAO3.210e-11686.43LytTR family two component transcriptional regulat... [more]
A4CLP0_ROBBH1.070e-11485.43Response Regulator Receiver Signal Transduction Hi... [more]
A0A0S1S9M8_9FLAO1.420e-11486.07LytTR family transcriptional regulator n=4 Tax=Fla... [more]
E6X6V7_CELAD2.310e-11485.07Two component transcriptional regulator, LytTR fam... [more]
A0A371JVA8_9FLAO1.200e-11386.00DNA-binding response regulator n=8 Tax=Flavobacter... [more]
G2PK13_MURRD4.550e-11385.43Two component transcriptional regulator, LytTR fam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007492LytTR DNA-binding domainSMARTSM00850LytTR_3coord: 107..198
e-value: 1.6E-18
score: 77.5
IPR007492LytTR DNA-binding domainPFAMPF04397LytTRcoord: 110..188
e-value: 3.0E-16
score: 59.4
IPR007492LytTR DNA-binding domainPROSITEPS50930HTH_LYTTRcoord: 101..199
score: 14.501
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 1..64
e-value: 1.5E-8
score: 34.8
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 1..68
score: 17.439
NoneNo IPR availableGENE3D2.40.50.40coord: 98..167
e-value: 7.2E-14
score: 53.7
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..76
e-value: 2.3E-13
score: 52.0
NoneNo IPR availablePANTHERPTHR43412FAMILY NOT NAMEDcoord: 3..191
NoneNo IPR availablePANTHERPTHR43412:SF1TRANSCRIPTIONAL REGULATORY PROTEIN YPDBcoord: 3..191
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 2..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13553contigE-siliculosus-1a_F_contig13553:686..1285 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13553.2121.1mRNA_E-siliculosus-1a_F_contig13553.2121.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13553 686..1285 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13553.2121.1 ID=prot_E-siliculosus-1a_F_contig13553.2121.1|Name=mRNA_E-siliculosus-1a_F_contig13553.2121.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=200bp
LTDIILASDKTGIDLGKHIRENYDIPFIFVTSNSDRATVENAKTVKPNGY
LVKPFEQQDLYTSIEIALANFTYGANGAAKGEQMPSQDDVPMSNSVLKDS
IFVKKQHLYYRIQFGDIQFIKADNVYLEVNTVDKKFLVRSPLKDYLEKLP
KTKFYRAHKSYSVNVDHIDAINSKDIMINNNLIPISKDFKEFIISAMNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011006CheY-like_superfamily
IPR001789Sig_transdc_resp-reg_receiver
IPR007492LytTR_DNA-bd_dom