prot_E-siliculosus-1a_F_contig1355.2118.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1355.2118.1
Unique Nameprot_E-siliculosus-1a_F_contig1355.2118.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length197
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1355.2118.1 vs. uniprot
Match: A0A6H5L0A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A0_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 2.430e-107
Identity = 160/198 (80.81%), Postives = 164/198 (82.83%), Query Frame = 0 
Query:    1 MGNVSSRSPAMVYKDGNIWNSTFDEAGNSCWMNSATGERAYHFIGGKAVRGPSSAASSPHTMQSPGCVSRRPSDTTSPYAMHSPGHAAPWTAGAPAMHSPGGYVAPAMHHSPSPTGFAAHAVXXXXXXXXXXXXXXXXXXGQAAATMVPY--YHQPGYGGVVPAGDPTPTAAGEAVGYRSSKHYIRPRSKASWMWTQP 196
            MGNVSSRSPAMVYKDGNIWNSTFDEAGNSCW+NSATGERAYHFIGGKAVRGPSSAASSPHTMQSPG VSRRPSDTT        GHAAPWTAG PAMHSPGGYVAP MHHSPSP GFAAHA+                  GQAAATMVPY  YHQPGYGGVV AGDPTPTAAGEA+GY SSKHY+RPRSKASWMWTQP
Sbjct:    1 MGNVSSRSPAMVYKDGNIWNSTFDEAGNSCWVNSATGERAYHFIGGKAVRGPSSAASSPHTMQSPGRVSRRPSDTTXXXXXXXXGHAAPWTAGVPAMHSPGGYVAPPMHHSPSPAGFAAHAMHSSAPADLACPTTNHPVPGQAAATMVPYSYYHQPGYGGVVAAGDPTPTAAGEAIGYPSSKHYVRPRSKASWMWTQP 198
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1355.2118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0A0_9PHAE2.430e-10780.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1355contigE-siliculosus-1a_F_contig1355:15368..18677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1355.2118.1mRNA_E-siliculosus-1a_F_contig1355.2118.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1355 15183..20084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1355.2118.1 ID=prot_E-siliculosus-1a_F_contig1355.2118.1|Name=mRNA_E-siliculosus-1a_F_contig1355.2118.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=197bp
MGNVSSRSPAMVYKDGNIWNSTFDEAGNSCWMNSATGERAYHFIGGKAVR
GPSSAASSPHTMQSPGCVSRRPSDTTSPYAMHSPGHAAPWTAGAPAMHSP
GGYVAPAMHHSPSPTGFAAHAVHSPAPAGFAGPAMNHPVPGQAAATMVPY
YHQPGYGGVVPAGDPTPTAAGEAVGYRSSKHYIRPRSKASWMWTQP*
back to top